RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 FAM3BP58499 235 aaPredicted RBP12.17□□□□□ -0.46
CPSF4-209ENST00000465132 SLC25A29Q8N8R3 303 aa12.17□□□□□ -0.46
CPSF4-209ENST00000465132 SAMD10Q9BYL1 202 aa12.17□□□□□ -0.46
CPSF4-209ENST00000465132 A0A0J9YY99 117 aa12.16□□□□□ -0.46
CPSF4-209ENST00000465132 PPP1R17O96001 155 aa12.16□□□□□ -0.46
CPSF4-209ENST00000465132 SRIP30626 198 aa12.16□□□□□ -0.46
CPSF4-209ENST00000465132 CAMPP49913 170 aa12.16□□□□□ -0.46
CPSF4-209ENST00000465132 KIF25-AS1Q9Y6Z4 181 aa12.16□□□□□ -0.46
CPSF4-209ENST00000465132 PKHD1P08F94 4074 aa12.16□□□□□ -0.46
CPSF4-209ENST00000465132 NUDT3O95989 172 aa12.15□□□□□ -0.46
CPSF4-209ENST00000465132 RPL36AP83881 106 aaKnown RBP12.15□□□□□ -0.46
CPSF4-209ENST00000465132 MRPL54Q6P161 138 aaKnown RBP12.15□□□□□ -0.46
CPSF4-209ENST00000465132 RPL36ALQ969Q0 106 aaKnown RBP12.15□□□□□ -0.46
CPSF4-209ENST00000465132 DNAJC30Q96LL9 226 aa12.15□□□□□ -0.46
CPSF4-209ENST00000465132 GYPEP15421 78 aa12.14□□□□□ -0.47
CPSF4-209ENST00000465132 S100A1P23297 94 aa12.14□□□□□ -0.47
CPSF4-209ENST00000465132 MRAP2Q96G30 205 aa12.14□□□□□ -0.47
CPSF4-209ENST00000465132 RYR1P21817 5038 aa12.14□□□□□ -0.47
CPSF4-209ENST00000465132 A0A1B0GXF2 115 aa12.13□□□□□ -0.47
CPSF4-209ENST00000465132 NEGR1Q7Z3B1 354 aa12.13□□□□□ -0.47
CPSF4-209ENST00000465132 VSIG2Q96IQ7 327 aa12.13□□□□□ -0.47
CPSF4-209ENST00000465132 SMCO4Q9NRQ5 59 aa12.13□□□□□ -0.47
CPSF4-209ENST00000465132 TNFRSF18Q9Y5U5 241 aa12.13□□□□□ -0.47
CPSF4-209ENST00000465132 CCL18P55774 89 aa12.12□□□□□ -0.47
CPSF4-209ENST00000465132 LINC00315P59091 139 aa12.12□□□□□ -0.47
CPSF4-209ENST00000465132 URGCP-MRPS24S4R325 110 aa12.12□□□□□ -0.47
CPSF4-209ENST00000465132 DNAH11Q96DT5 4516 aa12.11□□□□□ -0.47
CPSF4-209ENST00000465132 DYNC1H1Q14204 4646 aaKnown RBP12.11□□□□□ -0.47
CPSF4-209ENST00000465132 TRBV7-3A0A075B6L6 115 aa12.11□□□□□ -0.47
CPSF4-209ENST00000465132 PPBPP02775 128 aa12.11□□□□□ -0.47
CPSF4-209ENST00000465132 FAM104BQ5XKR9 115 aa12.11□□□□□ -0.47
CPSF4-209ENST00000465132 Q6ZR54 194 aa12.11□□□□□ -0.47
CPSF4-209ENST00000465132 UBE2DNLQ8IWF7 75 aa12.11□□□□□ -0.47
CPSF4-209ENST00000465132 GATD1Q8NB37 220 aa12.11□□□□□ -0.47
CPSF4-209ENST00000465132 NIT2Q9NQR4 276 aa12.11□□□□□ -0.47
CPSF4-209ENST00000465132 IGLV2-18A0A075B6J9 118 aa12.1□□□□□ -0.47
CPSF4-209ENST00000465132 MT-ND6P03923 174 aa12.1□□□□□ -0.47
CPSF4-209ENST00000465132 TMEM97Q5BJF2 176 aa12.1□□□□□ -0.47
CPSF4-209ENST00000465132 SUMO4Q6EEV6 95 aa12.1□□□□□ -0.47
CPSF4-209ENST00000465132 M0QY20 66 aa12.09□□□□□ -0.47
CPSF4-209ENST00000465132 HLA-DQA1P01909 254 aa12.09□□□□□ -0.47
CPSF4-209ENST00000465132 RAB4AP20338 218 aa12.09□□□□□ -0.47
CPSF4-209ENST00000465132 TRBV24-1A0A075B6N3 115 aa12.08□□□□□ -0.48
CPSF4-209ENST00000465132 A0A096LPF7 62 aa12.08□□□□□ -0.48
CPSF4-209ENST00000465132 CKS2P33552 79 aa12.08□□□□□ -0.48
CPSF4-209ENST00000465132 Q6ZSN1 163 aa12.08□□□□□ -0.48
CPSF4-209ENST00000465132 DAZ4Q86SG3 579 aaKnown RBP12.08□□□□□ -0.48
CPSF4-209ENST00000465132 AMN1Q8IY45 258 aa12.08□□□□□ -0.48
CPSF4-209ENST00000465132 ATP6V0E2Q8NHE4 81 aa12.08□□□□□ -0.48
CPSF4-209ENST00000465132 ZNRF2Q8NHG8 242 aa12.08□□□□□ -0.48
CPSF4-209ENST00000465132 GNB1LQ9BYB4 327 aa12.08□□□□□ -0.48
CPSF4-209ENST00000465132 DAZ3Q9NR90 486 aaKnown RBP12.08□□□□□ -0.48
CPSF4-209ENST00000465132 PKD1P98161 4303 aa12.08□□□□□ -0.48
CPSF4-209ENST00000465132 ABCA13Q86UQ4 5058 aa12.08□□□□□ -0.48
CPSF4-209ENST00000465132 GAGE12JA6NER3 117 aa12.07□□□□□ -0.48
CPSF4-209ENST00000465132 TIRAPP58753 221 aa12.07□□□□□ -0.48
CPSF4-209ENST00000465132 GAGE1Q13065 139 aa12.07□□□□□ -0.48
CPSF4-209ENST00000465132 GAGE4Q13068 117 aa12.07□□□□□ -0.48
CPSF4-209ENST00000465132 GAGE5Q13069 117 aa12.07□□□□□ -0.48
CPSF4-209ENST00000465132 GAGE13Q4V321 117 aa12.07□□□□□ -0.48
CPSF4-209ENST00000465132 ELOBQ15370 118 aa12.06□□□□□ -0.48
CPSF4-209ENST00000465132 OR10J3Q5JRS4 329 aa12.06□□□□□ -0.48
CPSF4-209ENST00000465132 GTSF1LQ9H1H1 148 aa12.06□□□□□ -0.48
CPSF4-209ENST00000465132 LAMTOR2Q9Y2Q5 125 aa12.06□□□□□ -0.48
CPSF4-209ENST00000465132 PHOX2AO14813 284 aa12.05□□□□□ -0.48
CPSF4-209ENST00000465132 ORMDL3Q8N138 153 aa12.05□□□□□ -0.48
CPSF4-209ENST00000465132 NEXN-AS1Q8NBZ9 246 aa12.05□□□□□ -0.48
CPSF4-209ENST00000465132 RNF185Q96GF1 192 aa12.05□□□□□ -0.48
CPSF4-209ENST00000465132 ST20Q9HBF5 79 aa12.05□□□□□ -0.48
CPSF4-209ENST00000465132 UBE2D3P61077 147 aa12.04□□□□□ -0.48
CPSF4-209ENST00000465132 UBE2D2P62837 147 aa12.04□□□□□ -0.48
CPSF4-209ENST00000465132 MRPL51Q4U2R6 128 aaKnown RBP12.04□□□□□ -0.48
CPSF4-209ENST00000465132 TRAV8-6A0A0B4J262 113 aa12.03□□□□□ -0.48
CPSF4-209ENST00000465132 TRBV6-5A0A0K0K1A5 114 aa12.03□□□□□ -0.48
CPSF4-209ENST00000465132 LOC100131303A0A0U1RQF7 123 aa12.03□□□□□ -0.48
CPSF4-209ENST00000465132 TCAPO15273 167 aa12.03□□□□□ -0.48
CPSF4-209ENST00000465132 APCSP02743 223 aa12.03□□□□□ -0.48
CPSF4-209ENST00000465132 C1orf134Q5TEV5 83 aa12.03□□□□□ -0.48
CPSF4-209ENST00000465132 ATRAIDQ6UW56 229 aa12.03□□□□□ -0.48
CPSF4-209ENST00000465132 LYPD5Q6UWN5 251 aa12.03□□□□□ -0.48
CPSF4-209ENST00000465132 TMEM136Q6ZRR5 245 aa12.03□□□□□ -0.48
CPSF4-209ENST00000465132 TRAV26-2A0A0B4J265 109 aa12.02□□□□□ -0.49
CPSF4-209ENST00000465132 ATP6V1G1O75348 118 aa12.02□□□□□ -0.49
CPSF4-209ENST00000465132 LINC00694P0DN24 101 aa12.02□□□□□ -0.49
CPSF4-209ENST00000465132 PKIAP61925 76 aa12.02□□□□□ -0.49
CPSF4-209ENST00000465132 C20orf78Q9BR46 151 aa12.02□□□□□ -0.49
CPSF4-209ENST00000465132 TGIF2-C20orf24A0A0A6YYL0 155 aa12.01□□□□□ -0.49
CPSF4-209ENST00000465132 D6R8Y8 96 aa12.01□□□□□ -0.49
CPSF4-209ENST00000465132 MRPS16Q9Y3D3 137 aaKnown RBP12.01□□□□□ -0.49
CPSF4-209ENST00000465132 VCYO14598 125 aa12□□□□□ -0.49
CPSF4-209ENST00000465132 NCR2O95944 276 aa12□□□□□ -0.49
CPSF4-209ENST00000465132 COTL1Q14019 142 aa12□□□□□ -0.49
CPSF4-209ENST00000465132 ESRGQ1W209 222 aa12□□□□□ -0.49
CPSF4-209ENST00000465132 LELP1Q5T871 98 aa12□□□□□ -0.49
CPSF4-209ENST00000465132 CBLN2Q8IUK8 224 aa12□□□□□ -0.49
CPSF4-209ENST00000465132 PRELID3AQ96N28 172 aa12□□□□□ -0.49
CPSF4-209ENST00000465132 TRAPPC1Q9Y5R8 145 aa12□□□□□ -0.49
CPSF4-209ENST00000465132 SDHAF1A6NFY7 115 aa11.99□□□□□ -0.49
CPSF4-209ENST00000465132 I3L3M4 83 aa11.99□□□□□ -0.49
CPSF4-209ENST00000465132 PMCHP20382 165 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 107.4 ms