RNA–Protein interactions for RNA: ENST00000464938.1

NUCKS1-202, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

TSL 2

Gene NUCKS1, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-202ENST00000464938 KMT2AQ03164 3969 aa-0.15□□□□□ -2.43
NUCKS1-202ENST00000464938 LRRC37A3O60309 1634 aa-0.15□□□□□ -2.43
NUCKS1-202ENST00000464938 LOC105371267A0A1B0GV96 52 aa-0.15□□□□□ -2.43
NUCKS1-202ENST00000464938 NPFFO15130 113 aa-0.15□□□□□ -2.43
NUCKS1-202ENST00000464938 Q5VV11 94 aa-0.15□□□□□ -2.43
NUCKS1-202ENST00000464938 WFDC6Q9BQY6 131 aa-0.15□□□□□ -2.43
NUCKS1-202ENST00000464938 BATF3Q9NR55 127 aa-0.15□□□□□ -2.43
NUCKS1-202ENST00000464938 SCP2D1Q9UJQ7 156 aa-0.15□□□□□ -2.43
NUCKS1-202ENST00000464938 ZMYM4Q5VZL5 1548 aa-0.15□□□□□ -2.43
NUCKS1-202ENST00000464938 CSMD3Q7Z407 3707 aa-0.15□□□□□ -2.43
NUCKS1-202ENST00000464938 BIVM-ERCC5R4GMW8 1640 aa-0.16□□□□□ -2.43
NUCKS1-202ENST00000464938 SMIM21Q3B7S5 101 aa-0.16□□□□□ -2.44
NUCKS1-202ENST00000464938 SCIMPQ6UWF3 145 aa-0.16□□□□□ -2.44
NUCKS1-202ENST00000464938 ZNF818PQ6ZRF7 136 aa-0.16□□□□□ -2.44
NUCKS1-202ENST00000464938 FAM213BQ8TBF2 198 aa-0.16□□□□□ -2.44
NUCKS1-202ENST00000464938 RPRMQ9NS64 109 aa-0.16□□□□□ -2.44
NUCKS1-202ENST00000464938 PARP14Q460N5 1801 aa-0.16□□□□□ -2.44
NUCKS1-202ENST00000464938 ARFGEF1Q9Y6D6 1849 aa-0.16□□□□□ -2.44
NUCKS1-202ENST00000464938 WNK2Q9Y3S1 2297 aa-0.16□□□□□ -2.44
NUCKS1-202ENST00000464938 ABCA2Q9BZC7 2435 aa-0.17□□□□□ -2.44
NUCKS1-202ENST00000464938 M0R2Z0 102 aa-0.17□□□□□ -2.44
NUCKS1-202ENST00000464938 IFNA17P01571 189 aa-0.17□□□□□ -2.44
NUCKS1-202ENST00000464938 GCHFRP30047 84 aa-0.17□□□□□ -2.44
NUCKS1-202ENST00000464938 UBE2G1P62253 170 aa-0.17□□□□□ -2.44
NUCKS1-202ENST00000464938 RPS25P62851 125 aaKnown RBP-0.17□□□□□ -2.44
NUCKS1-202ENST00000464938 ANP32BQ92688 251 aaKnown RBP-0.17□□□□□ -2.44
NUCKS1-202ENST00000464938 SDF2Q99470 211 aa-0.17□□□□□ -2.44
NUCKS1-202ENST00000464938 CYP4F30PQ9H0H9 118 aa-0.17□□□□□ -2.44
NUCKS1-202ENST00000464938 GRIN2AQ12879 1464 aa-0.17□□□□□ -2.44
NUCKS1-202ENST00000464938 FLNCQ14315 2725 aa-0.17□□□□□ -2.44
NUCKS1-202ENST00000464938 HMCN2Q8NDA2 5059 aa-0.17□□□□□ -2.44
NUCKS1-202ENST00000464938 NCOR1O75376 2440 aa-0.17□□□□□ -2.44
NUCKS1-202ENST00000464938 FAM208BQ5VWN6 2430 aa-0.17□□□□□ -2.44
NUCKS1-202ENST00000464938 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.17□□□□□ -2.44
NUCKS1-202ENST00000464938 IFT172Q9UG01 1749 aa-0.18□□□□□ -2.44
NUCKS1-202ENST00000464938 MYH6P13533 1939 aa-0.18□□□□□ -2.44
NUCKS1-202ENST00000464938 CASKIN1Q8WXD9 1431 aa-0.18□□□□□ -2.44
NUCKS1-202ENST00000464938 AHCTF1Q8WYP5 2266 aa-0.18□□□□□ -2.44
NUCKS1-202ENST00000464938 TRBV10-3A0A0K0K1G6 114 aa-0.18□□□□□ -2.44
NUCKS1-202ENST00000464938 J3QR89 54 aa-0.18□□□□□ -2.44
NUCKS1-202ENST00000464938 APOC4-APOC2K7ER74 178 aa-0.18□□□□□ -2.44
NUCKS1-202ENST00000464938 IL5P05113 134 aa-0.18□□□□□ -2.44
NUCKS1-202ENST00000464938 CBLN1P23435 193 aa-0.18□□□□□ -2.44
NUCKS1-202ENST00000464938 RRAS2P62070 204 aaPredicted RBP-0.18□□□□□ -2.44
NUCKS1-202ENST00000464938 SSBP3-AS1Q7Z2R9 100 aa-0.18□□□□□ -2.44
NUCKS1-202ENST00000464938 CNFNQ9BYD5 112 aa-0.18□□□□□ -2.44
NUCKS1-202ENST00000464938 COPZ2Q9P299 210 aa-0.18□□□□□ -2.44
NUCKS1-202ENST00000464938 ZNF518AQ6AHZ1 1483 aa-0.18□□□□□ -2.44
NUCKS1-202ENST00000464938 IFT140Q96RY7 1462 aa-0.18□□□□□ -2.44
NUCKS1-202ENST00000464938 CHD9Q3L8U1 2897 aa-0.18□□□□□ -2.44
NUCKS1-202ENST00000464938 LPAP08519 4548 aa-0.19□□□□□ -2.44
NUCKS1-202ENST00000464938 BICRAQ9NZM4 1560 aa-0.19□□□□□ -2.44
NUCKS1-202ENST00000464938 TRAV1-2A0A0B4J238 106 aa-0.19□□□□□ -2.44
NUCKS1-202ENST00000464938 SPAARA0A1B0GVQ0 90 aa-0.19□□□□□ -2.44
NUCKS1-202ENST00000464938 ZNF815PA8K554 130 aa-0.19□□□□□ -2.44
NUCKS1-202ENST00000464938 K7ERU9 68 aa-0.19□□□□□ -2.44
NUCKS1-202ENST00000464938 PIN1P1O15428 100 aa-0.19□□□□□ -2.44
NUCKS1-202ENST00000464938 NDUFB6O95139 128 aa-0.19□□□□□ -2.44
NUCKS1-202ENST00000464938 PIPP12273 146 aaPredicted RBP-0.19□□□□□ -2.44
NUCKS1-202ENST00000464938 GUCA1AP43080 201 aaPredicted RBP-0.19□□□□□ -2.44
NUCKS1-202ENST00000464938 CCL8P80075 99 aa-0.19□□□□□ -2.44
NUCKS1-202ENST00000464938 MAFIPQ8WZ33 124 aa-0.19□□□□□ -2.44
NUCKS1-202ENST00000464938 LZICQ8WZA0 190 aa-0.19□□□□□ -2.44
NUCKS1-202ENST00000464938 SPTSSAQ969W0 71 aa-0.19□□□□□ -2.44
NUCKS1-202ENST00000464938 PSMG3Q9BT73 122 aaPredicted RBP-0.19□□□□□ -2.44
NUCKS1-202ENST00000464938 TMEM191AQ9H0A3 160 aa-0.19□□□□□ -2.44
NUCKS1-202ENST00000464938 DOCK11Q5JSL3 2073 aa-0.19□□□□□ -2.44
NUCKS1-202ENST00000464938 SPTBN2O15020 2390 aa-0.19□□□□□ -2.44
NUCKS1-202ENST00000464938 LAMC1P11047 1609 aa-0.2□□□□□ -2.44
NUCKS1-202ENST00000464938 CCL18P55774 89 aa-0.2□□□□□ -2.44
NUCKS1-202ENST00000464938 RPL7L1Q6DKI1 246 aaKnown RBP-0.2□□□□□ -2.44
NUCKS1-202ENST00000464938 BAGE3Q86Y29 109 aa-0.2□□□□□ -2.44
NUCKS1-202ENST00000464938 UBE2DNLQ8IWF7 75 aa-0.2□□□□□ -2.44
NUCKS1-202ENST00000464938 TSTD1Q8NFU3 115 aa-0.2□□□□□ -2.44
NUCKS1-202ENST00000464938 DPH3Q96FX2 82 aa-0.2□□□□□ -2.44
NUCKS1-202ENST00000464938 NSD1Q96L73 2696 aaPredicted RBP-0.2□□□□□ -2.44
NUCKS1-202ENST00000464938 NHSL1Q5SYE7 1610 aa-0.2□□□□□ -2.44
NUCKS1-202ENST00000464938 ZNF609O15014 1411 aa-0.21□□□□□ -2.44
NUCKS1-202ENST00000464938 COPZ1P61923 177 aa-0.21□□□□□ -2.44
NUCKS1-202ENST00000464938 SPTSSBQ8NFR3 76 aa-0.21□□□□□ -2.44
NUCKS1-202ENST00000464938 TCEAL4Q96EI5 215 aa-0.21□□□□□ -2.44
NUCKS1-202ENST00000464938 TPT1P8Q9HAU6 139 aa-0.21□□□□□ -2.44
NUCKS1-202ENST00000464938 LINC00312Q9Y6C7 94 aa-0.21□□□□□ -2.44
NUCKS1-202ENST00000464938 PRDM2Q13029 1718 aa-0.21□□□□□ -2.44
NUCKS1-202ENST00000464938 NWD2Q9ULI1 1742 aa-0.21□□□□□ -2.44
NUCKS1-202ENST00000464938 MYCBP2O75592 4640 aa-0.22□□□□□ -2.44
NUCKS1-202ENST00000464938 HSPG2P98160 4391 aa-0.22□□□□□ -2.44
NUCKS1-202ENST00000464938 MRC1P22897 1456 aa-0.22□□□□□ -2.44
NUCKS1-202ENST00000464938 A6NIN4 97 aa-0.22□□□□□ -2.44
NUCKS1-202ENST00000464938 C10orf142B7Z368 130 aa-0.22□□□□□ -2.44
NUCKS1-202ENST00000464938 SIX6O95475 246 aa-0.22□□□□□ -2.44
NUCKS1-202ENST00000464938 SPINK8P0C7L1 97 aa-0.22□□□□□ -2.44
NUCKS1-202ENST00000464938 KCNRGQ8N5I3 272 aa-0.22□□□□□ -2.44
NUCKS1-202ENST00000464938 CCDC167Q9P0B6 97 aa-0.22□□□□□ -2.44
NUCKS1-202ENST00000464938 PRO0255Q9UI72 69 aa-0.22□□□□□ -2.44
NUCKS1-202ENST00000464938 PAIP2BQ9ULR5 123 aaKnown RBP-0.22□□□□□ -2.44
NUCKS1-202ENST00000464938 TENM4Q6N022 2769 aa-0.22□□□□□ -2.44
NUCKS1-202ENST00000464938 CFTRP13569 1480 aa-0.22□□□□□ -2.45
NUCKS1-202ENST00000464938 C2CD3Q4AC94 2353 aa-0.23□□□□□ -2.45
NUCKS1-202ENST00000464938 TNXBP22105 4242 aa-0.23□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms