RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 RABL2BQ9UNT1 228 aa2.86□□□□□ -1.95
COPS3-204ENST00000462236 OBSCNQ5VST9 7968 aa2.85□□□□□ -1.95
COPS3-204ENST00000462236 A0A087WWC5 75 aa2.85□□□□□ -1.95
COPS3-204ENST00000462236 GOSR2O14653 212 aa2.85□□□□□ -1.95
COPS3-204ENST00000462236 COX7A2P2O60397 106 aa2.85□□□□□ -1.95
COPS3-204ENST00000462236 SEC11BP0C7V7 166 aa2.85□□□□□ -1.95
COPS3-204ENST00000462236 MGST1P10620 155 aaKnown RBP2.85□□□□□ -1.95
COPS3-204ENST00000462236 RRAS2P62070 204 aaPredicted RBP2.85□□□□□ -1.95
COPS3-204ENST00000462236 LSM3P62310 102 aaKnown RBP2.85□□□□□ -1.95
COPS3-204ENST00000462236 MRPS10P82664 201 aaKnown RBP2.85□□□□□ -1.95
COPS3-204ENST00000462236 Q0VG73 95 aa2.85□□□□□ -1.95
COPS3-204ENST00000462236 TMEM128Q5BJH2 165 aa2.85□□□□□ -1.95
COPS3-204ENST00000462236 C6orf226Q5I0X4 101 aa2.85□□□□□ -1.95
COPS3-204ENST00000462236 TMEM78Q5T7P6 136 aa2.85□□□□□ -1.95
COPS3-204ENST00000462236 Q6ZVH6 145 aa2.85□□□□□ -1.95
COPS3-204ENST00000462236 Q8TAT8 98 aa2.85□□□□□ -1.95
COPS3-204ENST00000462236 RAB2BQ8WUD1 216 aa2.85□□□□□ -1.95
COPS3-204ENST00000462236 C15orf40Q8WUR7 153 aa2.85□□□□□ -1.95
COPS3-204ENST00000462236 UBE2WQ96B02 151 aa2.85□□□□□ -1.95
COPS3-204ENST00000462236 ZC2HC1AQ96GY0 325 aa2.85□□□□□ -1.95
COPS3-204ENST00000462236 FAM167A-AS1Q96KT0 104 aa2.85□□□□□ -1.95
COPS3-204ENST00000462236 SCGB3A2Q96PL1 93 aa2.85□□□□□ -1.95
COPS3-204ENST00000462236 GGACTQ9BVM4 153 aa2.85□□□□□ -1.95
COPS3-204ENST00000462236 SH3BGRL3Q9H299 93 aa2.85□□□□□ -1.95
COPS3-204ENST00000462236 PSENENQ9NZ42 101 aa2.85□□□□□ -1.95
COPS3-204ENST00000462236 FAM25AB3EWG3 89 aa2.84□□□□□ -1.95
COPS3-204ENST00000462236 FAM25CB3EWG5 89 aa2.84□□□□□ -1.95
COPS3-204ENST00000462236 FAM25GB3EWG6 89 aa2.84□□□□□ -1.95
COPS3-204ENST00000462236 PEX7O00628 323 aa2.84□□□□□ -1.95
COPS3-204ENST00000462236 GIPP09681 153 aaPredicted RBP2.84□□□□□ -1.95
COPS3-204ENST00000462236 METTL15P1P0C7V9 234 aa2.84□□□□□ -1.95
COPS3-204ENST00000462236 PYYP10082 97 aa2.84□□□□□ -1.95
COPS3-204ENST00000462236 TAS2R30P59541 319 aa2.84□□□□□ -1.95
COPS3-204ENST00000462236 HERVK_113P61574 105 aa2.84□□□□□ -1.95
COPS3-204ENST00000462236 NCS1P62166 190 aa2.84□□□□□ -1.95
COPS3-204ENST00000462236 RAB31Q13636 194 aa2.84□□□□□ -1.95
COPS3-204ENST00000462236 KIAA0087Q14695 138 aa2.84□□□□□ -1.95
COPS3-204ENST00000462236 NEDD8Q15843 81 aa2.84□□□□□ -1.95
COPS3-204ENST00000462236 MIC13Q5XKP0 118 aa2.84□□□□□ -1.95
COPS3-204ENST00000462236 ZFP2Q6ZN57 461 aa2.84□□□□□ -1.95
COPS3-204ENST00000462236 CLVS1Q8IUQ0 354 aaPredicted RBP2.84□□□□□ -1.95
COPS3-204ENST00000462236 OR1L4Q8NGR5 311 aa2.84□□□□□ -1.95
COPS3-204ENST00000462236 OR2G3Q8NGZ4 309 aa2.84□□□□□ -1.95
COPS3-204ENST00000462236 TVP23CQ96ET8 276 aa2.84□□□□□ -1.95
COPS3-204ENST00000462236 PFDN5Q99471 154 aa2.84□□□□□ -1.95
COPS3-204ENST00000462236 SLC25A2Q9BXI2 301 aa2.84□□□□□ -1.95
COPS3-204ENST00000462236 SAMD10Q9BYL1 202 aa2.84□□□□□ -1.95
COPS3-204ENST00000462236 DPH3P1Q9H4G8 78 aa2.84□□□□□ -1.95
COPS3-204ENST00000462236 CCDC59Q9P031 241 aaKnown RBP2.84□□□□□ -1.95
COPS3-204ENST00000462236 SCP2D1Q9UJQ7 156 aa2.84□□□□□ -1.95
COPS3-204ENST00000462236 IGHV3-73A0A0B4J1V6 119 aa2.83□□□□□ -1.96
COPS3-204ENST00000462236 SFT2D2O95562 160 aa2.83□□□□□ -1.96
COPS3-204ENST00000462236 NBEAP1P0C6P0 100 aa2.83□□□□□ -1.96
COPS3-204ENST00000462236 RNASE3P12724 160 aaKnown RBP2.83□□□□□ -1.96
COPS3-204ENST00000462236 VBP1P61758 197 aa2.83□□□□□ -1.96
COPS3-204ENST00000462236 ELOBQ15370 118 aa2.83□□□□□ -1.96
COPS3-204ENST00000462236 COA6Q5JTJ3 125 aaKnown RBP2.83□□□□□ -1.96
COPS3-204ENST00000462236 C12orf45Q8N5I9 185 aaPredicted RBP2.83□□□□□ -1.96
COPS3-204ENST00000462236 C11orf1Q9H5F2 150 aa2.83□□□□□ -1.96
COPS3-204ENST00000462236 SLC39A9Q9NUM3 307 aa2.83□□□□□ -1.96
COPS3-204ENST00000462236 IGHV3-64A0A075B6Q5 118 aa2.82□□□□□ -1.96
COPS3-204ENST00000462236 TRAV21A0A0B4J279 112 aa2.82□□□□□ -1.96
COPS3-204ENST00000462236 MUC21A0A0G2JKD1 596 aa2.82□□□□□ -1.96
COPS3-204ENST00000462236 C7orf66A4D0T2 115 aa2.82□□□□□ -1.96
COPS3-204ENST00000462236 SSSCA1O60232 199 aa2.82□□□□□ -1.96
COPS3-204ENST00000462236 RPS10P46783 165 aaKnown RBP2.82□□□□□ -1.96
COPS3-204ENST00000462236 SEC61GP60059 68 aa2.82□□□□□ -1.96
COPS3-204ENST00000462236 PPP1R1AQ13522 171 aa2.82□□□□□ -1.96
COPS3-204ENST00000462236 MIAQ16674 131 aa2.82□□□□□ -1.96
COPS3-204ENST00000462236 FXYD5Q96DB9 178 aa2.82□□□□□ -1.96
COPS3-204ENST00000462236 KCNS1Q96KK3 526 aa2.82□□□□□ -1.96
COPS3-204ENST00000462236 VCX3BQ9H321 246 aa2.82□□□□□ -1.96
COPS3-204ENST00000462236 TIMM9Q9Y5J7 89 aa2.82□□□□□ -1.96
COPS3-204ENST00000462236 FAM24AA6NFZ4 105 aa2.81□□□□□ -1.96
COPS3-204ENST00000462236 NMUP48645 174 aa2.81□□□□□ -1.96
COPS3-204ENST00000462236 FGF8P55075 233 aaPredicted RBP2.81□□□□□ -1.96
COPS3-204ENST00000462236 MPV17L2Q567V2 206 aa2.81□□□□□ -1.96
COPS3-204ENST00000462236 GCSAMLQ5JQS6 135 aa2.81□□□□□ -1.96
COPS3-204ENST00000462236 KRTAP5-2Q701N4 177 aa2.81□□□□□ -1.96
COPS3-204ENST00000462236 LINC01551Q86U37 167 aa2.81□□□□□ -1.96
COPS3-204ENST00000462236 ASB13Q8WXK3 278 aa2.81□□□□□ -1.96
COPS3-204ENST00000462236 AP3S1Q92572 193 aa2.81□□□□□ -1.96
COPS3-204ENST00000462236 FAM104AQ969W3 186 aa2.81□□□□□ -1.96
COPS3-204ENST00000462236 ATP5SQ99766 215 aa2.81□□□□□ -1.96
COPS3-204ENST00000462236 RABL2AQ9UBK7 228 aaPredicted RBP2.81□□□□□ -1.96
COPS3-204ENST00000462236 PSORS1C2Q9UIG4 136 aa2.81□□□□□ -1.96
COPS3-204ENST00000462236 URGCP-MRPS24S4R325 110 aa2.81□□□□□ -1.96
COPS3-204ENST00000462236 A0A087WX48 190 aa2.8□□□□□ -1.96
COPS3-204ENST00000462236 C9orf170A2RU37 121 aa2.8□□□□□ -1.96
COPS3-204ENST00000462236 PGPA6NDG6 321 aa2.8□□□□□ -1.96
COPS3-204ENST00000462236 A8MWV9 139 aa2.8□□□□□ -1.96
COPS3-204ENST00000462236 H0Y8G0 127 aa2.8□□□□□ -1.96
COPS3-204ENST00000462236 H7C1H1 209 aa2.8□□□□□ -1.96
COPS3-204ENST00000462236 HLA-DQA1P01909 254 aa2.8□□□□□ -1.96
COPS3-204ENST00000462236 TCRBP04435 133 aa2.8□□□□□ -1.96
COPS3-204ENST00000462236 ZNF80P51504 273 aaPredicted RBP2.8□□□□□ -1.96
COPS3-204ENST00000462236 UBE2D3P61077 147 aa2.8□□□□□ -1.96
COPS3-204ENST00000462236 UBE2D2P62837 147 aa2.8□□□□□ -1.96
COPS3-204ENST00000462236 MIR17HGQ75NE6 70 aa2.8□□□□□ -1.96
COPS3-204ENST00000462236 DYNC2LI1Q8TCX1 351 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms