RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 IGLV1-40P01703 118 aa13.67□□□□□ -0.22
HPS3-204ENST00000462030 Q8N1Y9 231 aa13.67□□□□□ -0.22
HPS3-204ENST00000462030 SPTBN4Q9H254 2564 aa13.67□□□□□ -0.22
HPS3-204ENST00000462030 IGHV4-61A0A0C4DH41 118 aa13.66□□□□□ -0.22
HPS3-204ENST00000462030 C9JAW5 83 aa13.66□□□□□ -0.22
HPS3-204ENST00000462030 SLC25A20O43772 301 aa13.66□□□□□ -0.22
HPS3-204ENST00000462030 MUSTN1Q8IVN3 82 aa13.66□□□□□ -0.22
HPS3-204ENST00000462030 A0A0J9YXV3 536 aa13.66□□□□□ -0.22
HPS3-204ENST00000462030 RHOHQ15669 191 aa13.66□□□□□ -0.22
HPS3-204ENST00000462030 CHD8Q9HCK8 2581 aa13.65□□□□□ -0.22
HPS3-204ENST00000462030 NCOR2Q9Y618 2525 aa13.65□□□□□ -0.22
HPS3-204ENST00000462030 C19orf84I3L1E1 186 aa13.65□□□□□ -0.22
HPS3-204ENST00000462030 RHODO00212 210 aa13.65□□□□□ -0.22
HPS3-204ENST00000462030 TMEM95Q3KNT9 176 aa13.65□□□□□ -0.22
HPS3-204ENST00000462030 C20orf203Q8NBC4 194 aa13.65□□□□□ -0.22
HPS3-204ENST00000462030 ELANEP08246 267 aa13.64□□□□□ -0.23
HPS3-204ENST00000462030 ERG28Q9UKR5 140 aa13.64□□□□□ -0.23
HPS3-204ENST00000462030 IGLV4-3A0A075B6K6 122 aa13.63□□□□□ -0.23
HPS3-204ENST00000462030 VCX2Q9H322 139 aa13.63□□□□□ -0.23
HPS3-204ENST00000462030 A0A0B4J2C4 111 aa13.63□□□□□ -0.23
HPS3-204ENST00000462030 K7EMT4 169 aa13.63□□□□□ -0.23
HPS3-204ENST00000462030 SPINK13Q1W4C9 94 aa13.63□□□□□ -0.23
HPS3-204ENST00000462030 A0A0J9YX75 114 aa13.62□□□□□ -0.23
HPS3-204ENST00000462030 CFHR3Q02985 330 aa13.62□□□□□ -0.23
HPS3-204ENST00000462030 ADARB2-AS1A8MUL3 147 aa13.62□□□□□ -0.23
HPS3-204ENST00000462030 IGHV1OR15-1A0A075B7D0 117 aa13.61□□□□□ -0.23
HPS3-204ENST00000462030 I3L3M4 83 aa13.61□□□□□ -0.23
HPS3-204ENST00000462030 M0R2P5 195 aa13.61□□□□□ -0.23
HPS3-204ENST00000462030 Q1RN00 199 aa13.61□□□□□ -0.23
HPS3-204ENST00000462030 SORL1Q92673 2214 aa13.6□□□□□ -0.23
HPS3-204ENST00000462030 A0A0J9YXY3 114 aa13.6□□□□□ -0.23
HPS3-204ENST00000462030 UCNP55089 124 aa13.6□□□□□ -0.23
HPS3-204ENST00000462030 C10orf99Q6UWK7 81 aa13.6□□□□□ -0.23
HPS3-204ENST00000462030 RNF183Q96D59 192 aa13.59□□□□□ -0.23
HPS3-204ENST00000462030 ODF3Q96PU9 254 aa13.59□□□□□ -0.23
HPS3-204ENST00000462030 SPXQ9BT56 116 aa13.59□□□□□ -0.23
HPS3-204ENST00000462030 LY6DQ14210 128 aa13.58□□□□□ -0.23
HPS3-204ENST00000462030 BEX4Q9NWD9 120 aaPredicted RBP13.58□□□□□ -0.23
HPS3-204ENST00000462030 TMEM262E9PQX1 116 aa13.58□□□□□ -0.24
HPS3-204ENST00000462030 IGHV3-30-3P0DP02 117 aa13.58□□□□□ -0.24
HPS3-204ENST00000462030 NTN5Q8WTR8 489 aaPredicted RBP13.58□□□□□ -0.24
HPS3-204ENST00000462030 PIMREGQ9BSJ6 248 aa13.58□□□□□ -0.24
HPS3-204ENST00000462030 DOPEY2Q9Y3R5 2298 aa13.58□□□□□ -0.24
HPS3-204ENST00000462030 PRRC2AP48634 2157 aaKnown RBP13.57□□□□□ -0.24
HPS3-204ENST00000462030 FAM104AQ969W3 186 aa13.57□□□□□ -0.24
HPS3-204ENST00000462030 TRAV8-3A0A0A6YYJ7 113 aa13.57□□□□□ -0.24
HPS3-204ENST00000462030 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.57□□□□□ -0.24
HPS3-204ENST00000462030 IGHV3-73A0A0B4J1V6 119 aa13.57□□□□□ -0.24
HPS3-204ENST00000462030 M0QXV9 152 aa13.57□□□□□ -0.24
HPS3-204ENST00000462030 GATA3P23771 443 aa13.57□□□□□ -0.24
HPS3-204ENST00000462030 SNRPD3P62318 126 aaKnown RBP13.57□□□□□ -0.24
HPS3-204ENST00000462030 CEMP1Q6PRD7 247 aaPredicted RBP13.57□□□□□ -0.24
HPS3-204ENST00000462030 K7EQG2 157 aa13.56□□□□□ -0.24
HPS3-204ENST00000462030 LINC01620Q4KN68 170 aa13.56□□□□□ -0.24
HPS3-204ENST00000462030 RNASE13Q5GAN3 156 aaKnown RBP13.56□□□□□ -0.24
HPS3-204ENST00000462030 LITAFQ99732 161 aa13.56□□□□□ -0.24
HPS3-204ENST00000462030 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.56□□□□□ -0.24
HPS3-204ENST00000462030 CD28P10747 220 aa13.56□□□□□ -0.24
HPS3-204ENST00000462030 MAP1AP78559 2803 aaPredicted RBP13.56□□□□□ -0.24
HPS3-204ENST00000462030 CRYBG3Q68DQ2 2970 aa13.56□□□□□ -0.24
HPS3-204ENST00000462030 TRIAP1O43715 76 aa13.55□□□□□ -0.24
HPS3-204ENST00000462030 PSMB8P28062 276 aa13.55□□□□□ -0.24
HPS3-204ENST00000462030 PROK1P58294 105 aa13.55□□□□□ -0.24
HPS3-204ENST00000462030 ATXN8Q156A1 80 aa13.55□□□□□ -0.24
HPS3-204ENST00000462030 CITED1Q99966 193 aa13.55□□□□□ -0.24
HPS3-204ENST00000462030 TIMM21Q9BVV7 248 aa13.55□□□□□ -0.24
HPS3-204ENST00000462030 ZFAND6Q6FIF0 208 aa13.55□□□□□ -0.24
HPS3-204ENST00000462030 C10orf105Q8TEF2 133 aa13.54□□□□□ -0.24
HPS3-204ENST00000462030 AVPP01185 164 aa13.54□□□□□ -0.24
HPS3-204ENST00000462030 ANAPC13Q9BS18 74 aa13.54□□□□□ -0.24
HPS3-204ENST00000462030 RBMY1A1P0DJD3 496 aaKnown RBP13.53□□□□□ -0.24
HPS3-204ENST00000462030 RBMY1CP0DJD4 496 aa13.53□□□□□ -0.24
HPS3-204ENST00000462030 RBMY1FQ15415 496 aaKnown RBP13.53□□□□□ -0.24
HPS3-204ENST00000462030 ADAMTSL4-AS1Q5T5F5 129 aa13.53□□□□□ -0.24
HPS3-204ENST00000462030 TEX29Q8N6K0 151 aa13.53□□□□□ -0.24
HPS3-204ENST00000462030 TEX49A0A1B0GTD5 131 aa13.53□□□□□ -0.24
HPS3-204ENST00000462030 HTN1P15515 57 aa13.53□□□□□ -0.24
HPS3-204ENST00000462030 CSPG4Q6UVK1 2322 aa13.52□□□□□ -0.24
HPS3-204ENST00000462030 IGHV4-30-2A0A087WSY4 118 aa13.52□□□□□ -0.24
HPS3-204ENST00000462030 A8MZ25 164 aa13.52□□□□□ -0.24
HPS3-204ENST00000462030 PRSS2P07478 247 aa13.52□□□□□ -0.24
HPS3-204ENST00000462030 MRPS36P82909 103 aaKnown RBP13.52□□□□□ -0.24
HPS3-204ENST00000462030 TRBV30A0A0K0K1B3 111 aa13.52□□□□□ -0.25
HPS3-204ENST00000462030 SVIPQ8NHG7 77 aa13.52□□□□□ -0.25
HPS3-204ENST00000462030 DUX5Q96PT3 197 aa13.52□□□□□ -0.25
HPS3-204ENST00000462030 Q9UF83 564 aa13.52□□□□□ -0.25
HPS3-204ENST00000462030 CRLF1O75462 422 aa13.51□□□□□ -0.25
HPS3-204ENST00000462030 SYNJ2BPP57105 145 aa13.51□□□□□ -0.25
HPS3-204ENST00000462030 NPC2P61916 151 aa13.51□□□□□ -0.25
HPS3-204ENST00000462030 Q6ZSV7 163 aa13.51□□□□□ -0.25
HPS3-204ENST00000462030 PYGO1Q9Y3Y4 419 aa13.51□□□□□ -0.25
HPS3-204ENST00000462030 TRGV11A0A075B6L2 103 aa13.5□□□□□ -0.25
HPS3-204ENST00000462030 TRAV4A0A0B4J268 109 aa13.5□□□□□ -0.25
HPS3-204ENST00000462030 NACAE9PAV3 2078 aa13.5□□□□□ -0.25
HPS3-204ENST00000462030 IGHV1-58A0A0C4DH39 117 aa13.5□□□□□ -0.25
HPS3-204ENST00000462030 TRBV10-2A0A0K0K1G8 114 aa13.5□□□□□ -0.25
HPS3-204ENST00000462030 PRM2P04554 102 aa13.5□□□□□ -0.25
HPS3-204ENST00000462030 MSMBP08118 114 aa13.5□□□□□ -0.25
HPS3-204ENST00000462030 NDUFA12Q9UI09 145 aa13.5□□□□□ -0.25
HPS3-204ENST00000462030 ITPR1Q14643 2758 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms