RNA–Protein interactions for RNA: ENST00000461897.5

COL4A6-204, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,889 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-204ENST00000461897 F6UB75 175 aa9.22□□□□□ -0.93
COL4A6-204ENST00000461897 CRYGDP07320 174 aa9.22□□□□□ -0.93
COL4A6-204ENST00000461897 MGPP08493 103 aa9.22□□□□□ -0.93
COL4A6-204ENST00000461897 RIPPLY3P57055 190 aa9.22□□□□□ -0.93
COL4A6-204ENST00000461897 PRADC1Q9BSG0 188 aa9.22□□□□□ -0.93
COL4A6-204ENST00000461897 CYSLTR1Q9Y271 337 aa9.22□□□□□ -0.93
COL4A6-204ENST00000461897 TRBV6-5A0A0K0K1A5 114 aa9.21□□□□□ -0.93
COL4A6-204ENST00000461897 TEX48A0A1B0GUV7 120 aa9.21□□□□□ -0.93
COL4A6-204ENST00000461897 IGIPA6NJ69 53 aa9.21□□□□□ -0.93
COL4A6-204ENST00000461897 SPRY2O43597 315 aa9.21□□□□□ -0.93
COL4A6-204ENST00000461897 WFDC12Q8WWY7 111 aa9.21□□□□□ -0.93
COL4A6-204ENST00000461897 TMEM141Q96I45 108 aa9.21□□□□□ -0.93
COL4A6-204ENST00000461897 SPANXB1Q9NS25 103 aaPredicted RBP9.21□□□□□ -0.93
COL4A6-204ENST00000461897 PRO0461Q9UI25 63 aa9.21□□□□□ -0.93
COL4A6-204ENST00000461897 SETD2Q9BYW2 2564 aaPredicted RBP9.21□□□□□ -0.93
COL4A6-204ENST00000461897 SETXQ7Z333 2677 aaKnown RBP9.21□□□□□ -0.93
COL4A6-204ENST00000461897 FN1P02751 2386 aaKnown RBP9.21□□□□□ -0.94
COL4A6-204ENST00000461897 TSHBP01222 138 aa9.21□□□□□ -0.94
COL4A6-204ENST00000461897 ID1P41134 155 aa9.21□□□□□ -0.94
COL4A6-204ENST00000461897 TIMM17AQ99595 171 aa9.21□□□□□ -0.94
COL4A6-204ENST00000461897 MUC4Q99102 2169 aa9.2□□□□□ -0.94
COL4A6-204ENST00000461897 FLNBO75369 2602 aaKnown RBP9.2□□□□□ -0.94
COL4A6-204ENST00000461897 IGLV4-69A0A075B6H9 119 aa9.2□□□□□ -0.94
COL4A6-204ENST00000461897 NDUFA7O95182 113 aa9.2□□□□□ -0.94
COL4A6-204ENST00000461897 UBE2D1P51668 147 aa9.2□□□□□ -0.94
COL4A6-204ENST00000461897 MORN3Q6PF18 240 aaPredicted RBP9.2□□□□□ -0.94
COL4A6-204ENST00000461897 DLX4Q92988 240 aaPredicted RBP9.2□□□□□ -0.94
COL4A6-204ENST00000461897 RAX2Q96IS3 184 aa9.2□□□□□ -0.94
COL4A6-204ENST00000461897 CITED2Q99967 270 aaPredicted RBP9.2□□□□□ -0.94
COL4A6-204ENST00000461897 TMEM238LA0A1B0GVL6 79 aa9.19□□□□□ -0.94
COL4A6-204ENST00000461897 A0A1W2PRX2 142 aa9.19□□□□□ -0.94
COL4A6-204ENST00000461897 A6NJY4 79 aa9.19□□□□□ -0.94
COL4A6-204ENST00000461897 VCYO14598 125 aa9.19□□□□□ -0.94
COL4A6-204ENST00000461897 DUSP14O95147 198 aaKnown RBP9.19□□□□□ -0.94
COL4A6-204ENST00000461897 FHL3Q13643 280 aa9.19□□□□□ -0.94
COL4A6-204ENST00000461897 ZFP2Q6ZN57 461 aa9.19□□□□□ -0.94
COL4A6-204ENST00000461897 C9orf85Q96MD7 179 aa9.19□□□□□ -0.94
COL4A6-204ENST00000461897 TRBV27A0A0K0K1C4 114 aa9.19□□□□□ -0.94
COL4A6-204ENST00000461897 ZNF815PA8K554 130 aa9.19□□□□□ -0.94
COL4A6-204ENST00000461897 RPL24P83731 157 aaKnown RBP9.19□□□□□ -0.94
COL4A6-204ENST00000461897 PMVKQ15126 192 aa9.19□□□□□ -0.94
COL4A6-204ENST00000461897 SUMO4Q6EEV6 95 aa9.19□□□□□ -0.94
COL4A6-204ENST00000461897 FAM159AQ6UWV7 190 aa9.19□□□□□ -0.94
COL4A6-204ENST00000461897 C11orf86A6NJI1 115 aa9.18□□□□□ -0.94
COL4A6-204ENST00000461897 K7EQG2 157 aa9.18□□□□□ -0.94
COL4A6-204ENST00000461897 PROK1P58294 105 aa9.18□□□□□ -0.94
COL4A6-204ENST00000461897 HERVK_113P61574 105 aa9.18□□□□□ -0.94
COL4A6-204ENST00000461897 WFDC2Q14508 124 aa9.18□□□□□ -0.94
COL4A6-204ENST00000461897 PEMTQ9UBM1 199 aa9.18□□□□□ -0.94
COL4A6-204ENST00000461897 J3QR89 54 aa9.17□□□□□ -0.94
COL4A6-204ENST00000461897 ZNF688P0C7X2 276 aa9.17□□□□□ -0.94
COL4A6-204ENST00000461897 GAGE13Q4V321 117 aa9.17□□□□□ -0.94
COL4A6-204ENST00000461897 KIR2DL4Q99706 377 aa9.17□□□□□ -0.94
COL4A6-204ENST00000461897 TP53TG1Q9Y2A0 90 aa9.17□□□□□ -0.94
COL4A6-204ENST00000461897 TSSC4Q9Y5U2 329 aaPredicted RBP9.17□□□□□ -0.94
COL4A6-204ENST00000461897 TMEM238C9JI98 176 aa9.17□□□□□ -0.94
COL4A6-204ENST00000461897 H3BMG7 143 aa9.17□□□□□ -0.94
COL4A6-204ENST00000461897 CD7P09564 240 aa9.17□□□□□ -0.94
COL4A6-204ENST00000461897 SCGB1A1P11684 91 aa9.17□□□□□ -0.94
COL4A6-204ENST00000461897 IGHV3-16A0A0C4DH30 117 aa9.16□□□□□ -0.94
COL4A6-204ENST00000461897 CCL24O00175 119 aa9.16□□□□□ -0.94
COL4A6-204ENST00000461897 ZNF876PQ49A33 203 aa9.16□□□□□ -0.94
COL4A6-204ENST00000461897 PLEKHB2Q96CS7 222 aa9.16□□□□□ -0.94
COL4A6-204ENST00000461897 A0A0J9YY99 117 aa9.15□□□□□ -0.94
COL4A6-204ENST00000461897 SDHAF1A6NFY7 115 aa9.15□□□□□ -0.94
COL4A6-204ENST00000461897 RHOHQ15669 191 aa9.15□□□□□ -0.94
COL4A6-204ENST00000461897 NSUN5P1Q3KNT7 163 aa9.15□□□□□ -0.94
COL4A6-204ENST00000461897 CD300EQ496F6 205 aaPredicted RBP9.15□□□□□ -0.94
COL4A6-204ENST00000461897 SPATA25Q9BR10 227 aa9.15□□□□□ -0.94
COL4A6-204ENST00000461897 A0A0J9YX75 114 aa9.15□□□□□ -0.95
COL4A6-204ENST00000461897 ADARB2-AS1A8MUL3 147 aa9.15□□□□□ -0.95
COL4A6-204ENST00000461897 CRLF1O75462 422 aa9.15□□□□□ -0.95
COL4A6-204ENST00000461897 UBE2D3P61077 147 aa9.15□□□□□ -0.95
COL4A6-204ENST00000461897 SNRPD3P62318 126 aaKnown RBP9.15□□□□□ -0.95
COL4A6-204ENST00000461897 UBE2D2P62837 147 aa9.15□□□□□ -0.95
COL4A6-204ENST00000461897 SCGB1D4Q6XE38 83 aa9.15□□□□□ -0.95
COL4A6-204ENST00000461897 NFE4Q86UQ8 179 aa9.15□□□□□ -0.95
COL4A6-204ENST00000461897 TMEM61Q8N0U2 210 aa9.15□□□□□ -0.95
COL4A6-204ENST00000461897 ATP6V0E2Q8NHE4 81 aa9.15□□□□□ -0.95
COL4A6-204ENST00000461897 JPT2Q9H910 190 aa9.15□□□□□ -0.95
COL4A6-204ENST00000461897 PGPEP1Q9NXJ5 209 aa9.15□□□□□ -0.95
COL4A6-204ENST00000461897 NIPBLQ6KC79 2804 aaeCLIP9.15□□□□□ -0.95
COL4A6-204ENST00000461897 M0QY20 66 aa9.14□□□□□ -0.95
COL4A6-204ENST00000461897 AMTNQ6UX39 209 aa9.14□□□□□ -0.95
COL4A6-204ENST00000461897 SYT8Q8NBV8 401 aa9.14□□□□□ -0.95
COL4A6-204ENST00000461897 AMELXQ99217 191 aa9.14□□□□□ -0.95
COL4A6-204ENST00000461897 ZNF256Q9Y2P7 627 aaPredicted RBP9.14□□□□□ -0.95
COL4A6-204ENST00000461897 C2CD3Q4AC94 2353 aa9.13□□□□□ -0.95
COL4A6-204ENST00000461897 WNK1Q9H4A3 2382 aa9.13□□□□□ -0.95
COL4A6-204ENST00000461897 KRTAP10-3P60369 221 aa9.13□□□□□ -0.95
COL4A6-204ENST00000461897 SLC25A29Q8N8R3 303 aa9.13□□□□□ -0.95
COL4A6-204ENST00000461897 SPAG8Q99932 426 aaPredicted RBP9.13□□□□□ -0.95
COL4A6-204ENST00000461897 A0A087WWL8 130 aa9.13□□□□□ -0.95
COL4A6-204ENST00000461897 TRAV12-3A0A0B4J271 114 aa9.13□□□□□ -0.95
COL4A6-204ENST00000461897 RPL39P62891 51 aaKnown RBP9.13□□□□□ -0.95
COL4A6-204ENST00000461897 SRSF9Q13242 221 aaKnown RBP eCLIP9.13□□□□□ -0.95
COL4A6-204ENST00000461897 DEFB114Q30KQ6 69 aa9.13□□□□□ -0.95
COL4A6-204ENST00000461897 ETDBQ3ZM63 59 aa9.13□□□□□ -0.95
COL4A6-204ENST00000461897 CFAP126Q5VTH2 177 aa9.13□□□□□ -0.95
COL4A6-204ENST00000461897 DYNLRB2Q8TF09 96 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms