RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 ZNF727A8MUV8 499 aa10.34□□□□□ -0.75
VARS-219ENST00000461328 H7C1H1 209 aa10.34□□□□□ -0.75
VARS-219ENST00000461328 KIF25-AS1Q9Y6Z4 181 aa10.34□□□□□ -0.75
VARS-219ENST00000461328 A0A087WX48 190 aa10.33□□□□□ -0.76
VARS-219ENST00000461328 NTF3P20783 257 aa10.33□□□□□ -0.76
VARS-219ENST00000461328 FUSP35637 526 aaKnown RBP eCLIP10.33□□□□□ -0.76
VARS-219ENST00000461328 LAGE3Q14657 143 aa10.33□□□□□ -0.76
VARS-219ENST00000461328 TWIST1Q15672 202 aa10.33□□□□□ -0.76
VARS-219ENST00000461328 DAZ4Q86SG3 579 aaKnown RBP10.33□□□□□ -0.76
VARS-219ENST00000461328 MAPKAPK5-AS1Q8N8E1 139 aa10.33□□□□□ -0.76
VARS-219ENST00000461328 DPH3P1Q9H4G8 78 aa10.33□□□□□ -0.76
VARS-219ENST00000461328 DAZ3Q9NR90 486 aaKnown RBP10.33□□□□□ -0.76
VARS-219ENST00000461328 NDUFS6O75380 124 aaKnown RBP10.32□□□□□ -0.76
VARS-219ENST00000461328 SRP19P09132 144 aaKnown RBP10.32□□□□□ -0.76
VARS-219ENST00000461328 SUMO4Q6EEV6 95 aa10.32□□□□□ -0.76
VARS-219ENST00000461328 CDPF1Q6NVV7 123 aa10.32□□□□□ -0.76
VARS-219ENST00000461328 TEX261Q6UWH6 196 aa10.32□□□□□ -0.76
VARS-219ENST00000461328 FAM231DQ6ZW35 169 aa10.32□□□□□ -0.76
VARS-219ENST00000461328 NIT1Q86X76 327 aa10.32□□□□□ -0.76
VARS-219ENST00000461328 PCLOQ9Y6V0 5065 aa10.31□□□□□ -0.76
VARS-219ENST00000461328 TRBV6-8A0A0A6YYG3 113 aa10.31□□□□□ -0.76
VARS-219ENST00000461328 TRAV8-3A0A0A6YYJ7 113 aa10.31□□□□□ -0.76
VARS-219ENST00000461328 TMEM262E9PQX1 116 aa10.31□□□□□ -0.76
VARS-219ENST00000461328 WDR73Q6P4I2 378 aa10.31□□□□□ -0.76
VARS-219ENST00000461328 SMIM15Q7Z3B0 74 aa10.31□□□□□ -0.76
VARS-219ENST00000461328 BORCS7Q96B45 105 aa10.31□□□□□ -0.76
VARS-219ENST00000461328 TM2D2Q9BX73 214 aa10.31□□□□□ -0.76
VARS-219ENST00000461328 A8MWL6 223 aa10.3□□□□□ -0.76
VARS-219ENST00000461328 M0QY20 66 aa10.3□□□□□ -0.76
VARS-219ENST00000461328 ELOBQ15370 118 aa10.3□□□□□ -0.76
VARS-219ENST00000461328 TMEM97Q5BJF2 176 aa10.3□□□□□ -0.76
VARS-219ENST00000461328 LINC01551Q86U37 167 aa10.3□□□□□ -0.76
VARS-219ENST00000461328 CHCHD5Q9BSY4 110 aa10.3□□□□□ -0.76
VARS-219ENST00000461328 CHCHD7Q9BUK0 85 aa10.3□□□□□ -0.76
VARS-219ENST00000461328 HSPG2P98160 4391 aa10.29□□□□□ -0.76
VARS-219ENST00000461328 CT83Q5H943 113 aa10.29□□□□□ -0.76
VARS-219ENST00000461328 RASL11AQ6T310 242 aa10.29□□□□□ -0.76
VARS-219ENST00000461328 GTSF1Q8WW33 167 aa10.29□□□□□ -0.76
VARS-219ENST00000461328 RMI2Q96E14 147 aa10.29□□□□□ -0.76
VARS-219ENST00000461328 PGLYRP4Q96LB8 373 aa10.29□□□□□ -0.76
VARS-219ENST00000461328 DNAJC30Q96LL9 226 aa10.29□□□□□ -0.76
VARS-219ENST00000461328 CNFNQ9BYD5 112 aa10.29□□□□□ -0.76
VARS-219ENST00000461328 KLK12Q9UKR0 248 aa10.29□□□□□ -0.76
VARS-219ENST00000461328 LRP1BQ9NZR2 4599 aa10.29□□□□□ -0.76
VARS-219ENST00000461328 RYR1P21817 5038 aa10.29□□□□□ -0.76
VARS-219ENST00000461328 PKIAP61925 76 aa10.28□□□□□ -0.76
VARS-219ENST00000461328 PEA15Q15121 130 aa10.28□□□□□ -0.76
VARS-219ENST00000461328 C15orf54Q8N8G6 183 aa10.28□□□□□ -0.76
VARS-219ENST00000461328 UBE2WQ96B02 151 aa10.28□□□□□ -0.76
VARS-219ENST00000461328 KRTAP4-5Q9BYR2 181 aa10.28□□□□□ -0.76
VARS-219ENST00000461328 TRBV25-1A0A075B6N4 114 aa10.27□□□□□ -0.77
VARS-219ENST00000461328 FAM74A3Q4VXF1 159 aa10.27□□□□□ -0.77
VARS-219ENST00000461328 IGKV2D-24A0A075B6R9 120 aa10.26□□□□□ -0.77
VARS-219ENST00000461328 CRPP02741 224 aa10.26□□□□□ -0.77
VARS-219ENST00000461328 ADIRFQ15847 76 aa10.26□□□□□ -0.77
VARS-219ENST00000461328 TMEM241Q24JQ0 296 aa10.26□□□□□ -0.77
VARS-219ENST00000461328 NIT2Q9NQR4 276 aa10.26□□□□□ -0.77
VARS-219ENST00000461328 OSTCQ9NRP0 149 aa10.26□□□□□ -0.77
VARS-219ENST00000461328 TRAV26-2A0A0B4J265 109 aa10.25□□□□□ -0.77
VARS-219ENST00000461328 IGHV1-24A0A0C4DH33 117 aa10.25□□□□□ -0.77
VARS-219ENST00000461328 LRCOL1A6NCL2 159 aa10.25□□□□□ -0.77
VARS-219ENST00000461328 HIGD1CA8MV81 97 aa10.25□□□□□ -0.77
VARS-219ENST00000461328 ANGP03950 147 aaKnown RBP10.25□□□□□ -0.77
VARS-219ENST00000461328 GAGE6Q13070 117 aa10.25□□□□□ -0.77
VARS-219ENST00000461328 MPV17L2Q567V2 206 aa10.25□□□□□ -0.77
VARS-219ENST00000461328 NTM-AS1Q6ZSK4 140 aa10.25□□□□□ -0.77
VARS-219ENST00000461328 Q8N1X5 172 aa10.25□□□□□ -0.77
VARS-219ENST00000461328 TSKUQ8WUA8 353 aa10.25□□□□□ -0.77
VARS-219ENST00000461328 NAT8Q9UHE5 227 aa10.25□□□□□ -0.77
VARS-219ENST00000461328 COX11Q9Y6N1 276 aa10.25□□□□□ -0.77
VARS-219ENST00000461328 IGLV5-52A0A0A0MRZ9 124 aa10.24□□□□□ -0.77
VARS-219ENST00000461328 C9JQL5 133 aa10.24□□□□□ -0.77
VARS-219ENST00000461328 GCSHP23434 173 aa10.24□□□□□ -0.77
VARS-219ENST00000461328 ISOC2Q96AB3 205 aa10.24□□□□□ -0.77
VARS-219ENST00000461328 GFRA4Q9GZZ7 299 aa10.24□□□□□ -0.77
VARS-219ENST00000461328 A0A1B0GUT8 65 aa10.23□□□□□ -0.77
VARS-219ENST00000461328 LECT2O14960 151 aa10.23□□□□□ -0.77
VARS-219ENST00000461328 FOXA3P55318 350 aaPredicted RBP10.23□□□□□ -0.77
VARS-219ENST00000461328 KRTAP10-1P60331 282 aa10.23□□□□□ -0.77
VARS-219ENST00000461328 RPL23P62829 140 aaKnown RBP10.23□□□□□ -0.77
VARS-219ENST00000461328 SRSF3P84103 164 aaKnown RBP10.23□□□□□ -0.77
VARS-219ENST00000461328 Q0VG73 95 aa10.23□□□□□ -0.77
VARS-219ENST00000461328 Q8N814 137 aa10.23□□□□□ -0.77
VARS-219ENST00000461328 GATD1Q8NB37 220 aa10.23□□□□□ -0.77
VARS-219ENST00000461328 NTN5Q8WTR8 489 aaPredicted RBP10.23□□□□□ -0.77
VARS-219ENST00000461328 SMDT1Q9H4I9 107 aa10.23□□□□□ -0.77
VARS-219ENST00000461328 RAB14P61106 215 aa10.22□□□□□ -0.77
VARS-219ENST00000461328 COTL1Q14019 142 aa10.22□□□□□ -0.77
VARS-219ENST00000461328 IQCJQ1A5X6 159 aa10.22□□□□□ -0.77
VARS-219ENST00000461328 ATRAIDQ6UW56 229 aa10.22□□□□□ -0.77
VARS-219ENST00000461328 Q8N976 141 aa10.22□□□□□ -0.77
VARS-219ENST00000461328 DEFB104AQ8WTQ1 72 aa10.22□□□□□ -0.77
VARS-219ENST00000461328 TMEM243Q9BU79 118 aa10.22□□□□□ -0.77
VARS-219ENST00000461328 C1orf43Q9BWL3 253 aa10.22□□□□□ -0.77
VARS-219ENST00000461328 V9GYV3 84 aa10.22□□□□□ -0.77
VARS-219ENST00000461328 APOBP04114 4563 aaKnown RBP10.22□□□□□ -0.77
VARS-219ENST00000461328 FAM231BA6NCW3 169 aa10.21□□□□□ -0.77
VARS-219ENST00000461328 UBE2L6O14933 153 aa10.21□□□□□ -0.77
VARS-219ENST00000461328 AMTP48728 403 aa10.21□□□□□ -0.77
VARS-219ENST00000461328 RBX1P62877 108 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms