RNA–Protein interactions for RNA: ENST00000461004.1

RTN4-212, Transcript of reticulon 4, humanhuman

TSL 3

Gene RTN4, Length 422 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-212ENST00000461004 ICOSQ9Y6W8 199 aa5.01□□□□□ -1.61
RTN4-212ENST00000461004 LY96Q9Y6Y9 160 aa5.01□□□□□ -1.61
RTN4-212ENST00000461004 KIF25-AS1Q9Y6Z4 181 aa5.01□□□□□ -1.61
RTN4-212ENST00000461004 FRAS1Q86XX4 4008 aa5□□□□□ -1.61
RTN4-212ENST00000461004 EPPK1P58107 5090 aaKnown RBP5□□□□□ -1.61
RTN4-212ENST00000461004 TRBV6-4A0A1B0GX49 114 aa5□□□□□ -1.61
RTN4-212ENST00000461004 GAGE12JA6NER3 117 aa5□□□□□ -1.61
RTN4-212ENST00000461004 NTF3P20783 257 aa5□□□□□ -1.61
RTN4-212ENST00000461004 EVI2AP22794 236 aa5□□□□□ -1.61
RTN4-212ENST00000461004 GAGE1Q13065 139 aa5□□□□□ -1.61
RTN4-212ENST00000461004 GAGE4Q13068 117 aa5□□□□□ -1.61
RTN4-212ENST00000461004 GAGE5Q13069 117 aa5□□□□□ -1.61
RTN4-212ENST00000461004 MRPL23Q16540 153 aaKnown RBP5□□□□□ -1.61
RTN4-212ENST00000461004 RNF212Q495C1 297 aa5□□□□□ -1.61
RTN4-212ENST00000461004 FAM74A3Q4VXF1 159 aa5□□□□□ -1.61
RTN4-212ENST00000461004 ZFP2Q6ZN57 461 aa5□□□□□ -1.61
RTN4-212ENST00000461004 PGLYRP4Q96LB8 373 aa5□□□□□ -1.61
RTN4-212ENST00000461004 NAT8Q9UHE5 227 aa5□□□□□ -1.61
RTN4-212ENST00000461004 V9GYV3 84 aa5□□□□□ -1.61
RTN4-212ENST00000461004 XKRY2A2RUG3 117 aa4.99□□□□□ -1.61
RTN4-212ENST00000461004 LINC00694P0DN24 101 aa4.99□□□□□ -1.61
RTN4-212ENST00000461004 SRIP30626 198 aa4.99□□□□□ -1.61
RTN4-212ENST00000461004 CTRLP40313 264 aa4.99□□□□□ -1.61
RTN4-212ENST00000461004 CCL18P55774 89 aa4.99□□□□□ -1.61
RTN4-212ENST00000461004 FAM3BP58499 235 aaPredicted RBP4.99□□□□□ -1.61
RTN4-212ENST00000461004 RHOHQ15669 191 aa4.99□□□□□ -1.61
RTN4-212ENST00000461004 NEGR1Q7Z3B1 354 aa4.99□□□□□ -1.61
RTN4-212ENST00000461004 OR10G8Q8NGN5 311 aa4.99□□□□□ -1.61
RTN4-212ENST00000461004 NTN5Q8WTR8 489 aaPredicted RBP4.99□□□□□ -1.61
RTN4-212ENST00000461004 PRADC1Q9BSG0 188 aa4.99□□□□□ -1.61
RTN4-212ENST00000461004 KRTAP1-5Q9BYS1 174 aa4.99□□□□□ -1.61
RTN4-212ENST00000461004 SMDT1Q9H4I9 107 aa4.99□□□□□ -1.61
RTN4-212ENST00000461004 OSTCQ9NRP0 149 aa4.99□□□□□ -1.61
RTN4-212ENST00000461004 MRPS16Q9Y3D3 137 aaKnown RBP4.99□□□□□ -1.61
RTN4-212ENST00000461004 A0A1W2PPQ1 181 aa4.98□□□□□ -1.61
RTN4-212ENST00000461004 F2Z2F3 143 aa4.98□□□□□ -1.61
RTN4-212ENST00000461004 RHODO00212 210 aa4.98□□□□□ -1.61
RTN4-212ENST00000461004 CIDEAO60543 219 aa4.98□□□□□ -1.61
RTN4-212ENST00000461004 MGPP08493 103 aa4.98□□□□□ -1.61
RTN4-212ENST00000461004 ADCYAP1P18509 176 aa4.98□□□□□ -1.61
RTN4-212ENST00000461004 CACNG7P62955 275 aa4.98□□□□□ -1.61
RTN4-212ENST00000461004 TWIST1Q15672 202 aa4.98□□□□□ -1.61
RTN4-212ENST00000461004 ZNF56Q15929 161 aa4.98□□□□□ -1.61
RTN4-212ENST00000461004 Q6ZR54 194 aa4.98□□□□□ -1.61
RTN4-212ENST00000461004 COMMD7Q86VX2 200 aa4.98□□□□□ -1.61
RTN4-212ENST00000461004 Q9H8V8 135 aa4.98□□□□□ -1.61
RTN4-212ENST00000461004 IGHV3-38A0A0C4DH36 116 aa4.97□□□□□ -1.61
RTN4-212ENST00000461004 HIGD1CA8MV81 97 aa4.97□□□□□ -1.61
RTN4-212ENST00000461004 A8MWL6 223 aa4.97□□□□□ -1.61
RTN4-212ENST00000461004 GAS8-AS1O95177 125 aa4.97□□□□□ -1.61
RTN4-212ENST00000461004 RAB4BP61018 213 aa4.97□□□□□ -1.61
RTN4-212ENST00000461004 SUMO4Q6EEV6 95 aa4.97□□□□□ -1.61
RTN4-212ENST00000461004 WDR73Q6P4I2 378 aa4.97□□□□□ -1.61
RTN4-212ENST00000461004 WFDC10BQ8IUB3 73 aa4.97□□□□□ -1.61
RTN4-212ENST00000461004 NUP35Q8NFH5 326 aa4.97□□□□□ -1.61
RTN4-212ENST00000461004 ATP6V0E2Q8NHE4 81 aa4.97□□□□□ -1.61
RTN4-212ENST00000461004 DEFB104AQ8WTQ1 72 aa4.97□□□□□ -1.61
RTN4-212ENST00000461004 TSKUQ8WUA8 353 aa4.97□□□□□ -1.61
RTN4-212ENST00000461004 AP1S3Q96PC3 154 aa4.97□□□□□ -1.61
RTN4-212ENST00000461004 UPK3BQ9BT76 320 aa4.97□□□□□ -1.61
RTN4-212ENST00000461004 CNFNQ9BYD5 112 aa4.97□□□□□ -1.61
RTN4-212ENST00000461004 TNFRSF18Q9Y5U5 241 aa4.97□□□□□ -1.61
RTN4-212ENST00000461004 COX11Q9Y6N1 276 aa4.97□□□□□ -1.61
RTN4-212ENST00000461004 DNAH11Q96DT5 4516 aa4.97□□□□□ -1.61
RTN4-212ENST00000461004 TRAV26-2A0A0B4J265 109 aa4.96□□□□□ -1.62
RTN4-212ENST00000461004 NBDYA0A0U1RRE5 68 aa4.96□□□□□ -1.62
RTN4-212ENST00000461004 TMEM218A2RU14 115 aa4.96□□□□□ -1.62
RTN4-212ENST00000461004 LINC00862A6NCI5 91 aa4.96□□□□□ -1.62
RTN4-212ENST00000461004 M0QY20 66 aa4.96□□□□□ -1.62
RTN4-212ENST00000461004 C15orf54Q8N8G6 183 aa4.96□□□□□ -1.62
RTN4-212ENST00000461004 NEXN-AS1Q8NBZ9 246 aa4.96□□□□□ -1.62
RTN4-212ENST00000461004 SMIM27A0A1W2PRY6 76 aa4.95□□□□□ -1.62
RTN4-212ENST00000461004 PRYO14603 147 aa4.95□□□□□ -1.62
RTN4-212ENST00000461004 RTL8CO15255 209 aa4.95□□□□□ -1.62
RTN4-212ENST00000461004 SMIM17P0DL12 118 aa4.95□□□□□ -1.62
RTN4-212ENST00000461004 UBE2D3P61077 147 aa4.95□□□□□ -1.62
RTN4-212ENST00000461004 UBE2D2P62837 147 aa4.95□□□□□ -1.62
RTN4-212ENST00000461004 UQCC3Q6UW78 93 aa4.95□□□□□ -1.62
RTN4-212ENST00000461004 GATD1Q8NB37 220 aa4.95□□□□□ -1.62
RTN4-212ENST00000461004 RNF185Q96GF1 192 aa4.95□□□□□ -1.62
RTN4-212ENST00000461004 GFRA4Q9GZZ7 299 aa4.95□□□□□ -1.62
RTN4-212ENST00000461004 GTSF1LQ9H1H1 148 aa4.95□□□□□ -1.62
RTN4-212ENST00000461004 DPH3P1Q9H4G8 78 aa4.95□□□□□ -1.62
RTN4-212ENST00000461004 DYNC1H1Q14204 4646 aaKnown RBP4.94□□□□□ -1.62
RTN4-212ENST00000461004 TRBV7-3A0A075B6L6 115 aa4.94□□□□□ -1.62
RTN4-212ENST00000461004 A0A1B0GUT8 65 aa4.94□□□□□ -1.62
RTN4-212ENST00000461004 F8W036 122 aa4.94□□□□□ -1.62
RTN4-212ENST00000461004 SIVA1O15304 175 aa4.94□□□□□ -1.62
RTN4-212ENST00000461004 TRGC1P0CF51 173 aa4.94□□□□□ -1.62
RTN4-212ENST00000461004 RPL36AP83881 106 aaKnown RBP4.94□□□□□ -1.62
RTN4-212ENST00000461004 LELP1Q5T871 98 aa4.94□□□□□ -1.62
RTN4-212ENST00000461004 NTM-AS1Q6ZSK4 140 aa4.94□□□□□ -1.62
RTN4-212ENST00000461004 RPL36ALQ969Q0 106 aaKnown RBP4.94□□□□□ -1.62
RTN4-212ENST00000461004 RPL39LQ96EH5 51 aaKnown RBP4.94□□□□□ -1.62
RTN4-212ENST00000461004 TRBV10-1A0A0K0K1A3 114 aa4.93□□□□□ -1.62
RTN4-212ENST00000461004 FAM231BA6NCW3 169 aa4.93□□□□□ -1.62
RTN4-212ENST00000461004 SMKR1H3BMG3 65 aa4.93□□□□□ -1.62
RTN4-212ENST00000461004 IGHV3-30P01768 117 aa4.93□□□□□ -1.62
RTN4-212ENST00000461004 IGHV3-33P01772 117 aa4.93□□□□□ -1.62
RTN4-212ENST00000461004 IGHV3-30-3P0DP02 117 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms