RNA–Protein interactions for RNA: ENST00000460770.1

SYPL1-203, Transcript of synaptophysin like 1, humanhuman

TSL 1 (best)

Gene SYPL1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-203ENST00000460770 TTC9CQ8N5M4 171 aa0.69□□□□□ -2.3
SYPL1-203ENST00000460770 Q8N8P6 123 aa0.69□□□□□ -2.3
SYPL1-203ENST00000460770 C10orf82Q8WW14 230 aa0.69□□□□□ -2.3
SYPL1-203ENST00000460770 DSCR8Q96T75 97 aa0.69□□□□□ -2.3
SYPL1-203ENST00000460770 DPH3P1Q9H4G8 78 aa0.69□□□□□ -2.3
SYPL1-203ENST00000460770 ADGRB2O60241 1585 aa0.69□□□□□ -2.3
SYPL1-203ENST00000460770 FAM135AQ9P2D6 1515 aa0.69□□□□□ -2.3
SYPL1-203ENST00000460770 PHRF1Q9P1Y6 1649 aaKnown RBP0.68□□□□□ -2.3
SYPL1-203ENST00000460770 MYO7AQ13402 2215 aa0.68□□□□□ -2.3
SYPL1-203ENST00000460770 ZDBF2Q9HCK1 2354 aa0.68□□□□□ -2.3
SYPL1-203ENST00000460770 MUC16Q8WXI7 14507 aa0.68□□□□□ -2.3
SYPL1-203ENST00000460770 TRBV30A0A0K0K1B3 111 aa0.68□□□□□ -2.3
SYPL1-203ENST00000460770 A0A1W2PPM0 123 aa0.68□□□□□ -2.3
SYPL1-203ENST00000460770 TMEM262E9PQX1 116 aa0.68□□□□□ -2.3
SYPL1-203ENST00000460770 SIX6O95475 246 aa0.68□□□□□ -2.3
SYPL1-203ENST00000460770 ROS1P08922 2347 aa0.68□□□□□ -2.3
SYPL1-203ENST00000460770 DAPK1P53355 1430 aa0.68□□□□□ -2.3
SYPL1-203ENST00000460770 ATP5EP56381 51 aaPredicted RBP0.68□□□□□ -2.3
SYPL1-203ENST00000460770 CAV3P56539 151 aa0.68□□□□□ -2.3
SYPL1-203ENST00000460770 UBA52P62987 128 aaKnown RBP0.68□□□□□ -2.3
SYPL1-203ENST00000460770 FXYD3Q14802 87 aa0.68□□□□□ -2.3
SYPL1-203ENST00000460770 ZNF818PQ6ZRF7 136 aa0.68□□□□□ -2.3
SYPL1-203ENST00000460770 COMMD6Q7Z4G1 85 aa0.68□□□□□ -2.3
SYPL1-203ENST00000460770 COX7B2Q8TF08 81 aa0.68□□□□□ -2.3
SYPL1-203ENST00000460770 LINC00208Q96KT6 92 aa0.68□□□□□ -2.3
SYPL1-203ENST00000460770 AMELYQ99218 206 aa0.68□□□□□ -2.3
SYPL1-203ENST00000460770 DPY30Q9C005 99 aa0.68□□□□□ -2.3
SYPL1-203ENST00000460770 CYP4F30PQ9H0H9 118 aa0.68□□□□□ -2.3
SYPL1-203ENST00000460770 LINC00312Q9Y6C7 94 aa0.68□□□□□ -2.3
SYPL1-203ENST00000460770 V9GYV3 84 aa0.68□□□□□ -2.3
SYPL1-203ENST00000460770 PARP14Q460N5 1801 aa0.68□□□□□ -2.3
SYPL1-203ENST00000460770 E9PCH4 1651 aa0.68□□□□□ -2.3
SYPL1-203ENST00000460770 CCNB3Q8WWL7 1395 aa0.68□□□□□ -2.3
SYPL1-203ENST00000460770 WDR97A6NE52 1622 aa0.67□□□□□ -2.3
SYPL1-203ENST00000460770 MBD5Q9P267 1494 aa0.67□□□□□ -2.3
SYPL1-203ENST00000460770 NALCNQ8IZF0 1738 aa0.67□□□□□ -2.3
SYPL1-203ENST00000460770 EIF4G3O43432 1585 aaKnown RBP0.67□□□□□ -2.3
SYPL1-203ENST00000460770 MYOM3Q5VTT5 1437 aa0.67□□□□□ -2.3
SYPL1-203ENST00000460770 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.67□□□□□ -2.3
SYPL1-203ENST00000460770 TRBV7-1A0A0A6YYK4 115 aa0.67□□□□□ -2.3
SYPL1-203ENST00000460770 NAP1L6A6NFF2 107 aa0.67□□□□□ -2.3
SYPL1-203ENST00000460770 H3BQ15 152 aa0.67□□□□□ -2.3
SYPL1-203ENST00000460770 GNGT2O14610 69 aa0.67□□□□□ -2.3
SYPL1-203ENST00000460770 ANGP03950 147 aaKnown RBP0.67□□□□□ -2.3
SYPL1-203ENST00000460770 GNG2P59768 71 aa0.67□□□□□ -2.3
SYPL1-203ENST00000460770 CCL19Q99731 98 aa0.67□□□□□ -2.3
SYPL1-203ENST00000460770 MANBALQ9NQG1 85 aa0.67□□□□□ -2.3
SYPL1-203ENST00000460770 UQCR10Q9UDW1 63 aa0.67□□□□□ -2.3
SYPL1-203ENST00000460770 R4GMQ9 66 aa0.67□□□□□ -2.3
SYPL1-203ENST00000460770 CTTNBP2Q8WZ74 1663 aa0.67□□□□□ -2.3
SYPL1-203ENST00000460770 A2ML1A8K2U0 1454 aa0.67□□□□□ -2.3
SYPL1-203ENST00000460770 MYOM2P54296 1465 aa0.67□□□□□ -2.3
SYPL1-203ENST00000460770 IFT140Q96RY7 1462 aa0.67□□□□□ -2.3
SYPL1-203ENST00000460770 ADGRB1O14514 1584 aa0.66□□□□□ -2.3
SYPL1-203ENST00000460770 ARFGEF1Q9Y6D6 1849 aa0.66□□□□□ -2.3
SYPL1-203ENST00000460770 TCHHQ07283 1943 aa0.66□□□□□ -2.3
SYPL1-203ENST00000460770 CNTLNQ9NXG0 1405 aa0.66□□□□□ -2.3
SYPL1-203ENST00000460770 MUC22E2RYF6 1773 aaPredicted RBP0.66□□□□□ -2.3
SYPL1-203ENST00000460770 DLEC1Q9Y238 1755 aa0.66□□□□□ -2.3
SYPL1-203ENST00000460770 CHKB-CPT1BH3BT56 60 aa0.66□□□□□ -2.3
SYPL1-203ENST00000460770 MPC2O95563 127 aa0.66□□□□□ -2.3
SYPL1-203ENST00000460770 PPP1R17O96001 155 aa0.66□□□□□ -2.3
SYPL1-203ENST00000460770 TRAPPC2P0DI81 140 aa0.66□□□□□ -2.3
SYPL1-203ENST00000460770 TRAPPC2BP0DI82 140 aa0.66□□□□□ -2.3
SYPL1-203ENST00000460770 FAUP35544 74 aaKnown RBP0.66□□□□□ -2.3
SYPL1-203ENST00000460770 UBE2D1P51668 147 aa0.66□□□□□ -2.3
SYPL1-203ENST00000460770 EFNA4P52798 201 aa0.66□□□□□ -2.3
SYPL1-203ENST00000460770 EDDM3BP56851 147 aa0.66□□□□□ -2.3
SYPL1-203ENST00000460770 ELOF1P60002 83 aaKnown RBP0.66□□□□□ -2.3
SYPL1-203ENST00000460770 SPAG11BQ08648 103 aa0.66□□□□□ -2.3
SYPL1-203ENST00000460770 KLKP1Q107X0 134 aa0.66□□□□□ -2.3
SYPL1-203ENST00000460770 TMEM170BQ5T4T1 132 aa0.66□□□□□ -2.3
SYPL1-203ENST00000460770 SPAG11AQ6PDA7 123 aa0.66□□□□□ -2.3
SYPL1-203ENST00000460770 C5orf56Q8N8D9 126 aa0.66□□□□□ -2.3
SYPL1-203ENST00000460770 VAMP8Q9BV40 100 aa0.66□□□□□ -2.3
SYPL1-203ENST00000460770 PEAK1Q9H792 1746 aa0.66□□□□□ -2.3
SYPL1-203ENST00000460770 PZPP20742 1482 aa0.66□□□□□ -2.3
SYPL1-203ENST00000460770 CPSF1Q10570 1443 aaKnown RBP0.65□□□□□ -2.3
SYPL1-203ENST00000460770 PLXNA1Q9UIW2 1896 aa0.65□□□□□ -2.3
SYPL1-203ENST00000460770 TRBV7-3A0A075B6L6 115 aa0.65□□□□□ -2.31
SYPL1-203ENST00000460770 NBDYA0A0U1RRE5 68 aa0.65□□□□□ -2.31
SYPL1-203ENST00000460770 LOC285095A0A1B0GVY8 99 aa0.65□□□□□ -2.31
SYPL1-203ENST00000460770 CRYM-AS1A6NIL9 109 aa0.65□□□□□ -2.31
SYPL1-203ENST00000460770 F2Z2F3 143 aa0.65□□□□□ -2.31
SYPL1-203ENST00000460770 CCL3L1P16619 93 aa0.65□□□□□ -2.31
SYPL1-203ENST00000460770 FXYD6P3P58550 94 aa0.65□□□□□ -2.31
SYPL1-203ENST00000460770 SEC11AP67812 179 aa0.65□□□□□ -2.31
SYPL1-203ENST00000460770 SPINK13Q1W4C9 94 aa0.65□□□□□ -2.31
SYPL1-203ENST00000460770 LINC00575Q6W349 94 aa0.65□□□□□ -2.31
SYPL1-203ENST00000460770 TSLPQ969D9 159 aa0.65□□□□□ -2.31
SYPL1-203ENST00000460770 MGST2Q99735 147 aa0.65□□□□□ -2.31
SYPL1-203ENST00000460770 PMCHL2Q9BQD1 86 aa0.65□□□□□ -2.31
SYPL1-203ENST00000460770 NPVFQ9HCQ7 196 aa0.65□□□□□ -2.31
SYPL1-203ENST00000460770 DYNLRB1Q9NP97 96 aa0.65□□□□□ -2.31
SYPL1-203ENST00000460770 TMEM14BQ9NUH8 114 aa0.65□□□□□ -2.31
SYPL1-203ENST00000460770 V9GYH0 126 aa0.65□□□□□ -2.31
SYPL1-203ENST00000460770 V9GYS6 101 aa0.65□□□□□ -2.31
SYPL1-203ENST00000460770 MRC2Q9UBG0 1479 aa0.65□□□□□ -2.31
SYPL1-203ENST00000460770 SMARCA2P51531 1590 aa0.65□□□□□ -2.31
SYPL1-203ENST00000460770 CADP27708 2225 aa0.65□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms