RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 A0A1B0GW64 132 aa1.03□□□□□ -2.24
RFC4-211ENST00000460408 A0A1W2PRE2 83 aa1.03□□□□□ -2.24
RFC4-211ENST00000460408 OR4C46A6NHA9 309 aa1.03□□□□□ -2.24
RFC4-211ENST00000460408 C5orf58C9J3I9 102 aa1.03□□□□□ -2.24
RFC4-211ENST00000460408 INMT-MINDY4F8WBC2 141 aa1.03□□□□□ -2.24
RFC4-211ENST00000460408 G3V2T6 193 aa1.03□□□□□ -2.24
RFC4-211ENST00000460408 H7C1C5 153 aa1.03□□□□□ -2.24
RFC4-211ENST00000460408 DEFB4AO15263 64 aa1.03□□□□□ -2.24
RFC4-211ENST00000460408 ORC5O43913 435 aa1.03□□□□□ -2.24
RFC4-211ENST00000460408 DCTN3O75935 186 aa1.03□□□□□ -2.24
RFC4-211ENST00000460408 IFNA1P01562 189 aa1.03□□□□□ -2.24
RFC4-211ENST00000460408 RBP4P02753 201 aa1.03□□□□□ -2.24
RFC4-211ENST00000460408 ASAH2BP0C7U1 165 aa1.03□□□□□ -2.24
RFC4-211ENST00000460408 METTL15P1P0C7V9 234 aa1.03□□□□□ -2.24
RFC4-211ENST00000460408 LINC00032P0C843 101 aa1.03□□□□□ -2.24
RFC4-211ENST00000460408 PIPP12273 146 aaPredicted RBP1.03□□□□□ -2.24
RFC4-211ENST00000460408 MIFP14174 115 aa1.03□□□□□ -2.24
RFC4-211ENST00000460408 S100A11P31949 105 aa1.03□□□□□ -2.24
RFC4-211ENST00000460408 PHBP35232 272 aa1.03□□□□□ -2.24
RFC4-211ENST00000460408 GUCA1AP43080 201 aaPredicted RBP1.03□□□□□ -2.24
RFC4-211ENST00000460408 AKR1D1P51857 326 aa1.03□□□□□ -2.24
RFC4-211ENST00000460408 AQP4P55087 323 aa1.03□□□□□ -2.24
RFC4-211ENST00000460408 CAV3P56539 151 aa1.03□□□□□ -2.24
RFC4-211ENST00000460408 RPS20P60866 119 aaKnown RBP1.03□□□□□ -2.24
RFC4-211ENST00000460408 CKS1BP61024 79 aa1.03□□□□□ -2.24
RFC4-211ENST00000460408 PCBD1P61457 104 aa1.03□□□□□ -2.24
RFC4-211ENST00000460408 RRAS2P62070 204 aaPredicted RBP1.03□□□□□ -2.24
RFC4-211ENST00000460408 LCN6P62502 163 aa1.03□□□□□ -2.24
RFC4-211ENST00000460408 RHOBP62745 196 aa1.03□□□□□ -2.24
RFC4-211ENST00000460408 RPL18Q07020 188 aaKnown RBP1.03□□□□□ -2.24
RFC4-211ENST00000460408 FABP9Q0Z7S8 132 aa1.03□□□□□ -2.24
RFC4-211ENST00000460408 TMEM97Q5BJF2 176 aa1.03□□□□□ -2.24
RFC4-211ENST00000460408 TMEM128Q5BJH2 165 aa1.03□□□□□ -2.24
RFC4-211ENST00000460408 RNASE10Q5GAN6 216 aaKnown RBP1.03□□□□□ -2.24
RFC4-211ENST00000460408 FAM27BQ5VT28 67 aa1.03□□□□□ -2.24
RFC4-211ENST00000460408 SAMD13Q5VXD3 122 aa1.03□□□□□ -2.24
RFC4-211ENST00000460408 Q6ZSA8 131 aa1.03□□□□□ -2.24
RFC4-211ENST00000460408 SNX29P2Q8IUI4 249 aa1.03□□□□□ -2.24
RFC4-211ENST00000460408 C4orf33Q8N1A6 199 aa1.03□□□□□ -2.24
RFC4-211ENST00000460408 C10orf126Q8N4M7 172 aa1.03□□□□□ -2.24
RFC4-211ENST00000460408 C5orf56Q8N8D9 126 aa1.03□□□□□ -2.24
RFC4-211ENST00000460408 C9orf163Q8N9P6 203 aa1.03□□□□□ -2.24
RFC4-211ENST00000460408 OR11H6Q8NGC7 330 aa1.03□□□□□ -2.24
RFC4-211ENST00000460408 OR5H6Q8NGV6 325 aa1.03□□□□□ -2.24
RFC4-211ENST00000460408 GRPEL2Q8TAA5 225 aa1.03□□□□□ -2.24
RFC4-211ENST00000460408 MYOZ3Q8TDC0 251 aa1.03□□□□□ -2.24
RFC4-211ENST00000460408 SFT2D1Q8WV19 159 aa1.03□□□□□ -2.24
RFC4-211ENST00000460408 Q96M85 177 aa1.03□□□□□ -2.24
RFC4-211ENST00000460408 PHB2Q99623 299 aa1.03□□□□□ -2.24
RFC4-211ENST00000460408 SIGMAR1Q99720 223 aa1.03□□□□□ -2.24
RFC4-211ENST00000460408 WFDC6Q9BQY6 131 aa1.03□□□□□ -2.24
RFC4-211ENST00000460408 VPS25Q9BRG1 176 aa1.03□□□□□ -2.24
RFC4-211ENST00000460408 GINS3Q9BRX5 216 aa1.03□□□□□ -2.24
RFC4-211ENST00000460408 DCSTAMPQ9H295 470 aa1.03□□□□□ -2.24
RFC4-211ENST00000460408 RSL24D1Q9UHA3 163 aaKnown RBP1.03□□□□□ -2.24
RFC4-211ENST00000460408 NAT8Q9UHE5 227 aa1.03□□□□□ -2.24
RFC4-211ENST00000460408 UTP11Q9Y3A2 253 aaKnown RBP1.03□□□□□ -2.24
RFC4-211ENST00000460408 USH2AO75445 5202 aa1.02□□□□□ -2.25
RFC4-211ENST00000460408 A0A087WTM6 91 aa1.02□□□□□ -2.25
RFC4-211ENST00000460408 MEIKINA0A087WXM9 373 aa1.02□□□□□ -2.25
RFC4-211ENST00000460408 CPSF4LA6NMK7 179 aaKnown RBP1.02□□□□□ -2.25
RFC4-211ENST00000460408 HMSDA8MTL9 139 aa1.02□□□□□ -2.25
RFC4-211ENST00000460408 OOSP1A8MZH6 123 aa1.02□□□□□ -2.25
RFC4-211ENST00000460408 FAM25AB3EWG3 89 aa1.02□□□□□ -2.25
RFC4-211ENST00000460408 FAM25CB3EWG5 89 aa1.02□□□□□ -2.25
RFC4-211ENST00000460408 FAM25GB3EWG6 89 aa1.02□□□□□ -2.25
RFC4-211ENST00000460408 H3BQF6 201 aa1.02□□□□□ -2.25
RFC4-211ENST00000460408 RER1O15258 196 aa1.02□□□□□ -2.25
RFC4-211ENST00000460408 CCL25O15444 150 aa1.02□□□□□ -2.25
RFC4-211ENST00000460408 PDE6DO43924 150 aa1.02□□□□□ -2.25
RFC4-211ENST00000460408 TPST1O60507 370 aa1.02□□□□□ -2.25
RFC4-211ENST00000460408 SRP19P09132 144 aaKnown RBP1.02□□□□□ -2.25
RFC4-211ENST00000460408 KRTAP2-3P0C7H8 128 aa1.02□□□□□ -2.25
RFC4-211ENST00000460408 S100GP29377 79 aa1.02□□□□□ -2.25
RFC4-211ENST00000460408 CSN1S1P47710 185 aa1.02□□□□□ -2.25
RFC4-211ENST00000460408 SULT1A1P50225 295 aa1.02□□□□□ -2.25
RFC4-211ENST00000460408 NCALDP61601 193 aa1.02□□□□□ -2.25
RFC4-211ENST00000460408 HIST1H4AP62805 103 aaKnown RBP1.02□□□□□ -2.25
RFC4-211ENST00000460408 HIST1H3AP68431 136 aa1.02□□□□□ -2.25
RFC4-211ENST00000460408 EDDM3AQ14507 147 aa1.02□□□□□ -2.25
RFC4-211ENST00000460408 OCIAD2Q56VL3 154 aa1.02□□□□□ -2.25
RFC4-211ENST00000460408 GLYATL3Q5SZD4 288 aa1.02□□□□□ -2.25
RFC4-211ENST00000460408 HIST2H3PS2Q5TEC6 136 aa1.02□□□□□ -2.25
RFC4-211ENST00000460408 IFT20Q8IY31 132 aa1.02□□□□□ -2.25
RFC4-211ENST00000460408 C1orf158Q8N1D5 194 aa1.02□□□□□ -2.25
RFC4-211ENST00000460408 C9orf62Q8N4C0 152 aa1.02□□□□□ -2.25
RFC4-211ENST00000460408 TCTEX1D1Q8N7M0 179 aa1.02□□□□□ -2.25
RFC4-211ENST00000460408 PFN4Q8NHR9 129 aa1.02□□□□□ -2.25
RFC4-211ENST00000460408 TMEM203Q969S6 136 aa1.02□□□□□ -2.25
RFC4-211ENST00000460408 PPP3R2Q96LZ3 170 aa1.02□□□□□ -2.25
RFC4-211ENST00000460408 NAA38Q9BRA0 125 aaKnown RBP1.02□□□□□ -2.25
RFC4-211ENST00000460408 TCEAL7Q9BRU2 100 aa1.02□□□□□ -2.25
RFC4-211ENST00000460408 CCDC32Q9BV29 185 aa1.02□□□□□ -2.25
RFC4-211ENST00000460408 KRTAP2-4Q9BYR9 128 aa1.02□□□□□ -2.25
RFC4-211ENST00000460408 CYSTM1Q9H1C7 97 aa1.02□□□□□ -2.25
RFC4-211ENST00000460408 CACYBPQ9HB71 228 aaKnown RBP1.02□□□□□ -2.25
RFC4-211ENST00000460408 CALML5Q9NZT1 146 aa1.02□□□□□ -2.25
RFC4-211ENST00000460408 PYCARDQ9ULZ3 195 aa1.02□□□□□ -2.25
RFC4-211ENST00000460408 HSPB11Q9Y547 144 aa1.02□□□□□ -2.25
RFC4-211ENST00000460408 DNAJC15Q9Y5T4 150 aa1.02□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 116.4 ms