RNA–Protein interactions for RNA: ENST00000458707.1

VPS50-208, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-208ENST00000458707 KIF25-AS1Q9Y6Z4 181 aa6.4□□□□□ -1.39
VPS50-208ENST00000458707 A0A0J9YY99 117 aa6.39□□□□□ -1.39
VPS50-208ENST00000458707 IGIPA6NJ69 53 aa6.39□□□□□ -1.39
VPS50-208ENST00000458707 TSHBP01222 138 aa6.39□□□□□ -1.39
VPS50-208ENST00000458707 LINC00694P0DN24 101 aa6.39□□□□□ -1.39
VPS50-208ENST00000458707 S100A4P26447 101 aaKnown RBP6.39□□□□□ -1.39
VPS50-208ENST00000458707 LINC00315P59091 139 aa6.39□□□□□ -1.39
VPS50-208ENST00000458707 CDSNQ15517 529 aa6.39□□□□□ -1.39
VPS50-208ENST00000458707 LYRM7Q5U5X0 104 aa6.39□□□□□ -1.39
VPS50-208ENST00000458707 SCGB1D4Q6XE38 83 aa6.39□□□□□ -1.39
VPS50-208ENST00000458707 KRTAP19-1Q8IUB9 90 aa6.39□□□□□ -1.39
VPS50-208ENST00000458707 SBSPONQ8IVN8 264 aa6.39□□□□□ -1.39
VPS50-208ENST00000458707 TLN1Q9Y490 2541 aaKnown RBP6.39□□□□□ -1.39
VPS50-208ENST00000458707 C11orf86A6NJI1 115 aa6.39□□□□□ -1.39
VPS50-208ENST00000458707 K7ENP7 123 aa6.39□□□□□ -1.39
VPS50-208ENST00000458707 NDUFA4O00483 81 aa6.39□□□□□ -1.39
VPS50-208ENST00000458707 RS1O15537 224 aa6.39□□□□□ -1.39
VPS50-208ENST00000458707 CRLF1O75462 422 aa6.39□□□□□ -1.39
VPS50-208ENST00000458707 DUSP14O95147 198 aaKnown RBP6.39□□□□□ -1.39
VPS50-208ENST00000458707 MGPP08493 103 aa6.39□□□□□ -1.39
VPS50-208ENST00000458707 POLR2KP53803 58 aaKnown RBP6.39□□□□□ -1.39
VPS50-208ENST00000458707 SRSF9Q13242 221 aaKnown RBP eCLIP6.39□□□□□ -1.39
VPS50-208ENST00000458707 NFE4Q86UQ8 179 aa6.39□□□□□ -1.39
VPS50-208ENST00000458707 NDUFA11Q86Y39 141 aa6.39□□□□□ -1.39
VPS50-208ENST00000458707 TRBV20-1A0A075B6N2 111 aa6.38□□□□□ -1.39
VPS50-208ENST00000458707 TRAV41A0A0B4J266 112 aa6.38□□□□□ -1.39
VPS50-208ENST00000458707 CCL21O00585 134 aa6.38□□□□□ -1.39
VPS50-208ENST00000458707 SPRY2O43597 315 aa6.38□□□□□ -1.39
VPS50-208ENST00000458707 HERVK_113P61574 105 aa6.38□□□□□ -1.39
VPS50-208ENST00000458707 ADORA2A-AS1P86434 159 aa6.38□□□□□ -1.39
VPS50-208ENST00000458707 PMVKQ15126 192 aa6.38□□□□□ -1.39
VPS50-208ENST00000458707 TMEM219Q86XT9 240 aa6.38□□□□□ -1.39
VPS50-208ENST00000458707 TMEM141Q96I45 108 aa6.38□□□□□ -1.39
VPS50-208ENST00000458707 TIMM17AQ99595 171 aa6.38□□□□□ -1.39
VPS50-208ENST00000458707 SPTAN1Q13813 2472 aaKnown RBP6.38□□□□□ -1.39
VPS50-208ENST00000458707 PTPRQQ9UMZ3 2332 aa6.37□□□□□ -1.39
VPS50-208ENST00000458707 NPFFO15130 113 aa6.37□□□□□ -1.39
VPS50-208ENST00000458707 IGHV3-30P01768 117 aa6.37□□□□□ -1.39
VPS50-208ENST00000458707 IGHV3-30-5P0DP03 117 aa6.37□□□□□ -1.39
VPS50-208ENST00000458707 PSMB2P49721 201 aa6.37□□□□□ -1.39
VPS50-208ENST00000458707 KRTAP21-3Q3LHN1 58 aa6.37□□□□□ -1.39
VPS50-208ENST00000458707 OXLD1Q5BKU9 147 aa6.37□□□□□ -1.39
VPS50-208ENST00000458707 ZFP2Q6ZN57 461 aa6.37□□□□□ -1.39
VPS50-208ENST00000458707 TEN1Q86WV5 123 aa6.37□□□□□ -1.39
VPS50-208ENST00000458707 SLC25A29Q8N8R3 303 aa6.37□□□□□ -1.39
VPS50-208ENST00000458707 KLHL30-AS1Q8NEE0 82 aa6.37□□□□□ -1.39
VPS50-208ENST00000458707 MED13LQ71F56 2210 aa6.37□□□□□ -1.39
VPS50-208ENST00000458707 GNRH2O43555 120 aa6.36□□□□□ -1.39
VPS50-208ENST00000458707 ZNF688P0C7X2 276 aa6.36□□□□□ -1.39
VPS50-208ENST00000458707 RNASE4P34096 147 aaKnown RBP6.36□□□□□ -1.39
VPS50-208ENST00000458707 UNQ9165/PRO28630Q6UXU0 137 aa6.36□□□□□ -1.39
VPS50-208ENST00000458707 CARD19Q96LW7 228 aa6.36□□□□□ -1.39
VPS50-208ENST00000458707 AMELXQ99217 191 aa6.36□□□□□ -1.39
VPS50-208ENST00000458707 TP53TG1Q9Y2A0 90 aa6.36□□□□□ -1.39
VPS50-208ENST00000458707 MOB4Q9Y3A3 225 aa6.36□□□□□ -1.39
VPS50-208ENST00000458707 ABCA2Q9BZC7 2435 aa6.36□□□□□ -1.39
VPS50-208ENST00000458707 LOC107984156A0A0G2JMH3 177 aa6.36□□□□□ -1.39
VPS50-208ENST00000458707 KLLNB2CW77 178 aa6.36□□□□□ -1.39
VPS50-208ENST00000458707 TCL1BO95988 128 aa6.36□□□□□ -1.39
VPS50-208ENST00000458707 CFC1BP0CG36 223 aa6.36□□□□□ -1.39
VPS50-208ENST00000458707 CFC1P0CG37 223 aa6.36□□□□□ -1.39
VPS50-208ENST00000458707 MRPL23Q16540 153 aaKnown RBP6.36□□□□□ -1.39
VPS50-208ENST00000458707 ZNF876PQ49A33 203 aa6.36□□□□□ -1.39
VPS50-208ENST00000458707 ARL17AQ8IVW1 177 aa6.36□□□□□ -1.39
VPS50-208ENST00000458707 C10orf126Q8N4M7 172 aa6.36□□□□□ -1.39
VPS50-208ENST00000458707 TRBV6-5A0A0K0K1A5 114 aa6.35□□□□□ -1.39
VPS50-208ENST00000458707 TRBV27A0A0K0K1C4 114 aa6.35□□□□□ -1.39
VPS50-208ENST00000458707 H3BUA1 57 aa6.35□□□□□ -1.39
VPS50-208ENST00000458707 J3QLI3 93 aa6.35□□□□□ -1.39
VPS50-208ENST00000458707 VCYO14598 125 aa6.35□□□□□ -1.39
VPS50-208ENST00000458707 TSPEAR-AS2P59090 65 aa6.35□□□□□ -1.39
VPS50-208ENST00000458707 LMO4P61968 165 aa6.35□□□□□ -1.39
VPS50-208ENST00000458707 SPTBN1Q01082 2364 aaKnown RBP6.34□□□□□ -1.39
VPS50-208ENST00000458707 A0A1W2PPR1 153 aa6.34□□□□□ -1.39
VPS50-208ENST00000458707 FAM229AH3BQW9 127 aa6.34□□□□□ -1.39
VPS50-208ENST00000458707 LGALS9O00182 355 aa6.34□□□□□ -1.39
VPS50-208ENST00000458707 TRBV12-3P01733 135 aa6.34□□□□□ -1.39
VPS50-208ENST00000458707 DEFB1P60022 68 aa6.34□□□□□ -1.39
VPS50-208ENST00000458707 SUMO4Q6EEV6 95 aa6.34□□□□□ -1.39
VPS50-208ENST00000458707 Q6ZS46 218 aa6.34□□□□□ -1.39
VPS50-208ENST00000458707 USMG5Q96IX5 58 aa6.34□□□□□ -1.39
VPS50-208ENST00000458707 KIR2DL4Q99706 377 aa6.34□□□□□ -1.39
VPS50-208ENST00000458707 PRO1854Q9UHT4 67 aa6.34□□□□□ -1.39
VPS50-208ENST00000458707 KRTAP4-8A0A0G2JLE6 195 aa6.34□□□□□ -1.39
VPS50-208ENST00000458707 LOC107984640A0A0U1RRK4 108 aa6.34□□□□□ -1.39
VPS50-208ENST00000458707 F6UB75 175 aa6.34□□□□□ -1.39
VPS50-208ENST00000458707 SNCGO76070 127 aa6.34□□□□□ -1.39
VPS50-208ENST00000458707 IGHV1-69P01742 117 aa6.34□□□□□ -1.39
VPS50-208ENST00000458707 PRO0628Q9UI54 55 aa6.34□□□□□ -1.39
VPS50-208ENST00000458707 UBR5O95071 2799 aaPredicted RBP6.34□□□□□ -1.4
VPS50-208ENST00000458707 SDHAF1A6NFY7 115 aa6.33□□□□□ -1.4
VPS50-208ENST00000458707 A8MWV9 139 aa6.33□□□□□ -1.4
VPS50-208ENST00000458707 J3QQQ9 107 aa6.33□□□□□ -1.4
VPS50-208ENST00000458707 EMP1P54849 157 aa6.33□□□□□ -1.4
VPS50-208ENST00000458707 RPL39P62891 51 aaKnown RBP6.33□□□□□ -1.4
VPS50-208ENST00000458707 NSUN5P1Q3KNT7 163 aa6.33□□□□□ -1.4
VPS50-208ENST00000458707 C2CD3Q4AC94 2353 aa6.33□□□□□ -1.4
VPS50-208ENST00000458707 PRRC2AP48634 2157 aaKnown RBP6.33□□□□□ -1.4
VPS50-208ENST00000458707 NDUFA7O95182 113 aa6.32□□□□□ -1.4
VPS50-208ENST00000458707 TMEM170BQ5T4T1 132 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 167 ms