RNA–Protein interactions for RNA: ENST00000458034.1

RFX3-211, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-211ENST00000458034 SPAG8Q99932 426 aaPredicted RBP8.06□□□□□ -1.12
RFX3-211ENST00000458034 NCOR2Q9Y618 2525 aa8.06□□□□□ -1.12
RFX3-211ENST00000458034 H3BMM0 161 aa8.05□□□□□ -1.12
RFX3-211ENST00000458034 Q8N3U1 123 aa8.05□□□□□ -1.12
RFX3-211ENST00000458034 DNAJC30Q96LL9 226 aa8.05□□□□□ -1.12
RFX3-211ENST00000458034 SPXQ9BT56 116 aa8.05□□□□□ -1.12
RFX3-211ENST00000458034 VCX2Q9H322 139 aa8.05□□□□□ -1.12
RFX3-211ENST00000458034 MRPL16Q9NX20 251 aaKnown RBP8.05□□□□□ -1.12
RFX3-211ENST00000458034 PYGO1Q9Y3Y4 419 aa8.05□□□□□ -1.12
RFX3-211ENST00000458034 TNFRSF18Q9Y5U5 241 aa8.05□□□□□ -1.12
RFX3-211ENST00000458034 DOPEY1Q5JWR5 2465 aa8.05□□□□□ -1.12
RFX3-211ENST00000458034 A0A0J9YY99 117 aa8.04□□□□□ -1.12
RFX3-211ENST00000458034 TMEM223A0PJW6 202 aa8.04□□□□□ -1.12
RFX3-211ENST00000458034 J3QQQ9 107 aa8.04□□□□□ -1.12
RFX3-211ENST00000458034 UBE2D1P51668 147 aa8.04□□□□□ -1.12
RFX3-211ENST00000458034 RPL24P83731 157 aaKnown RBP8.04□□□□□ -1.12
RFX3-211ENST00000458034 C21orf62-AS1Q17RA5 79 aa8.04□□□□□ -1.12
RFX3-211ENST00000458034 KHDC1LQ5JSQ8 128 aa8.04□□□□□ -1.12
RFX3-211ENST00000458034 TRAV25A0A0B4J276 109 aa8.03□□□□□ -1.12
RFX3-211ENST00000458034 INSP01308 110 aa8.03□□□□□ -1.12
RFX3-211ENST00000458034 EMP1P54849 157 aa8.03□□□□□ -1.12
RFX3-211ENST00000458034 GAGE13Q4V321 117 aa8.03□□□□□ -1.12
RFX3-211ENST00000458034 SLC25A29Q8N8R3 303 aa8.03□□□□□ -1.12
RFX3-211ENST00000458034 ZNRF2Q8NHG8 242 aa8.03□□□□□ -1.12
RFX3-211ENST00000458034 DLX4Q92988 240 aaPredicted RBP8.03□□□□□ -1.12
RFX3-211ENST00000458034 Q96MF0 132 aa8.03□□□□□ -1.12
RFX3-211ENST00000458034 CLUHP3Q96NS8 147 aa8.03□□□□□ -1.12
RFX3-211ENST00000458034 MAP6D1Q9H9H5 199 aa8.03□□□□□ -1.12
RFX3-211ENST00000458034 PGPEP1Q9NXJ5 209 aa8.03□□□□□ -1.12
RFX3-211ENST00000458034 PKD1L2Q7Z442 2459 aa8.02□□□□□ -1.13
RFX3-211ENST00000458034 IGLV4-3A0A075B6K6 122 aa8.02□□□□□ -1.13
RFX3-211ENST00000458034 P0DMU3 169 aa8.02□□□□□ -1.13
RFX3-211ENST00000458034 FAM231AP0DMU4 169 aa8.02□□□□□ -1.13
RFX3-211ENST00000458034 FAM231CP0DMU5 169 aa8.02□□□□□ -1.13
RFX3-211ENST00000458034 CD28P10747 220 aa8.02□□□□□ -1.13
RFX3-211ENST00000458034 KLHL30-AS1Q8NEE0 82 aa8.02□□□□□ -1.13
RFX3-211ENST00000458034 SPANXA1Q9NS26 97 aa8.02□□□□□ -1.13
RFX3-211ENST00000458034 CHD8Q9HCK8 2581 aa8.02□□□□□ -1.13
RFX3-211ENST00000458034 TMEM238C9JI98 176 aa8.01□□□□□ -1.13
RFX3-211ENST00000458034 RBMY1A1P0DJD3 496 aaKnown RBP8.01□□□□□ -1.13
RFX3-211ENST00000458034 RBMY1CP0DJD4 496 aa8.01□□□□□ -1.13
RFX3-211ENST00000458034 ZNF22P17026 224 aaPredicted RBP8.01□□□□□ -1.13
RFX3-211ENST00000458034 RBMY1FQ15415 496 aaKnown RBP8.01□□□□□ -1.13
RFX3-211ENST00000458034 DEFB136Q30KP8 78 aa8.01□□□□□ -1.13
RFX3-211ENST00000458034 TMEM61Q8N0U2 210 aa8.01□□□□□ -1.13
RFX3-211ENST00000458034 ZNF843Q8N446 348 aa8.01□□□□□ -1.13
RFX3-211ENST00000458034 LINC01587Q99440 93 aa8.01□□□□□ -1.13
RFX3-211ENST00000458034 CSPG4Q6UVK1 2322 aa8□□□□□ -1.13
RFX3-211ENST00000458034 TEX48A0A1B0GUV7 120 aa8□□□□□ -1.13
RFX3-211ENST00000458034 RBMY1BA6NDE4 496 aaKnown RBP8□□□□□ -1.13
RFX3-211ENST00000458034 RBMY1EA6NEQ0 496 aaKnown RBP8□□□□□ -1.13
RFX3-211ENST00000458034 H3BMG7 143 aa8□□□□□ -1.13
RFX3-211ENST00000458034 APOMO95445 188 aa8□□□□□ -1.13
RFX3-211ENST00000458034 TSPAN13O95857 204 aa8□□□□□ -1.13
RFX3-211ENST00000458034 IGHV3-30P01768 117 aa8□□□□□ -1.13
RFX3-211ENST00000458034 PRB1P04280 392 aa8□□□□□ -1.13
RFX3-211ENST00000458034 RBMY1DP0C7P1 496 aaKnown RBP8□□□□□ -1.13
RFX3-211ENST00000458034 IGHV3-30-5P0DP03 117 aa8□□□□□ -1.13
RFX3-211ENST00000458034 HTN1P15515 57 aa8□□□□□ -1.13
RFX3-211ENST00000458034 TSPEAR-AS2P59090 65 aa8□□□□□ -1.13
RFX3-211ENST00000458034 DEFB114Q30KQ6 69 aa8□□□□□ -1.13
RFX3-211ENST00000458034 C18orf65Q6ZTR6 163 aa8□□□□□ -1.13
RFX3-211ENST00000458034 DEFB104AQ8WTQ1 72 aa8□□□□□ -1.13
RFX3-211ENST00000458034 AMELXQ99217 191 aa8□□□□□ -1.13
RFX3-211ENST00000458034 RELNP78509 3460 aa7.99□□□□□ -1.13
RFX3-211ENST00000458034 TRBV20-1A0A075B6N2 111 aa7.99□□□□□ -1.13
RFX3-211ENST00000458034 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.99□□□□□ -1.13
RFX3-211ENST00000458034 RS1O15537 224 aa7.99□□□□□ -1.13
RFX3-211ENST00000458034 CMC4P56277 68 aaPredicted RBP7.99□□□□□ -1.13
RFX3-211ENST00000458034 BEAN1Q3B7T3 259 aa7.99□□□□□ -1.13
RFX3-211ENST00000458034 NDUFA11Q86Y39 141 aa7.99□□□□□ -1.13
RFX3-211ENST00000458034 KRTAP1-3Q8IUG1 177 aa7.99□□□□□ -1.13
RFX3-211ENST00000458034 ATP6V0E2Q8NHE4 81 aa7.99□□□□□ -1.13
RFX3-211ENST00000458034 IGHV3-73A0A0B4J1V6 119 aa7.98□□□□□ -1.13
RFX3-211ENST00000458034 LOC107984156A0A0G2JMH3 177 aa7.98□□□□□ -1.13
RFX3-211ENST00000458034 A0A0J9YXV3 536 aa7.98□□□□□ -1.13
RFX3-211ENST00000458034 IGHV3-53P01767 116 aa7.98□□□□□ -1.13
RFX3-211ENST00000458034 UBE2D3P61077 147 aa7.98□□□□□ -1.13
RFX3-211ENST00000458034 UBE2D2P62837 147 aa7.98□□□□□ -1.13
RFX3-211ENST00000458034 MRPS36P82909 103 aaKnown RBP7.98□□□□□ -1.13
RFX3-211ENST00000458034 WFDC2Q14508 124 aa7.98□□□□□ -1.13
RFX3-211ENST00000458034 CFAP126Q5VTH2 177 aa7.98□□□□□ -1.13
RFX3-211ENST00000458034 ARL17AQ8IVW1 177 aa7.98□□□□□ -1.13
RFX3-211ENST00000458034 OPRPNQ99935 248 aaPredicted RBP7.98□□□□□ -1.13
RFX3-211ENST00000458034 TIMM21Q9BVV7 248 aa7.98□□□□□ -1.13
RFX3-211ENST00000458034 PRO1854Q9UHT4 67 aa7.98□□□□□ -1.13
RFX3-211ENST00000458034 DOPEY2Q9Y3R5 2298 aa7.98□□□□□ -1.13
RFX3-211ENST00000458034 A0A0B4J2C4 111 aa7.97□□□□□ -1.13
RFX3-211ENST00000458034 TINCRA0A1B0GVN0 87 aa7.97□□□□□ -1.13
RFX3-211ENST00000458034 PSMB2P49721 201 aa7.97□□□□□ -1.13
RFX3-211ENST00000458034 KRTAP10-9P60411 292 aa7.97□□□□□ -1.13
RFX3-211ENST00000458034 SMAGPQ0VAQ4 97 aa7.97□□□□□ -1.13
RFX3-211ENST00000458034 STHQ8IWL8 128 aa7.97□□□□□ -1.13
RFX3-211ENST00000458034 C10orf126Q8N4M7 172 aa7.97□□□□□ -1.13
RFX3-211ENST00000458034 C11orf72Q8NBR9 251 aa7.97□□□□□ -1.13
RFX3-211ENST00000458034 PRO0461Q9UI25 63 aa7.97□□□□□ -1.13
RFX3-211ENST00000458034 NACAE9PAV3 2078 aa7.97□□□□□ -1.13
RFX3-211ENST00000458034 CACNA1AO00555 2505 aa7.97□□□□□ -1.13
RFX3-211ENST00000458034 ANKRD17O75179 2603 aaKnown RBP7.96□□□□□ -1.14
RFX3-211ENST00000458034 CFC1BP0CG36 223 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms