RNA–Protein interactions for RNA: ENST00000457863.1

HMGB3P30-201, Transcript of high mobility group box 3 pseudogene 30, humanhuman

BASIC

Gene HMGB3P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P30-201ENST00000457863 A6NIN4 97 aa2.41□□□□□ -2.02
HMGB3P30-201ENST00000457863 HCG22E2RYF7 251 aa2.41□□□□□ -2.02
HMGB3P30-201ENST00000457863 F2Z2F3 143 aa2.41□□□□□ -2.02
HMGB3P30-201ENST00000457863 ASAH2BP0C7U1 165 aa2.41□□□□□ -2.02
HMGB3P30-201ENST00000457863 SNRPFP62306 86 aaKnown RBP2.41□□□□□ -2.02
HMGB3P30-201ENST00000457863 MIR22HGQ0VDD5 57 aa2.41□□□□□ -2.02
HMGB3P30-201ENST00000457863 VMO1Q7Z5L0 202 aa2.41□□□□□ -2.02
HMGB3P30-201ENST00000457863 SPTSSBQ8NFR3 76 aa2.41□□□□□ -2.02
HMGB3P30-201ENST00000457863 Q8TAT8 98 aa2.41□□□□□ -2.02
HMGB3P30-201ENST00000457863 RPS10P5Q9NQ39 176 aa2.41□□□□□ -2.02
HMGB3P30-201ENST00000457863 KLK12Q9UKR0 248 aa2.41□□□□□ -2.02
HMGB3P30-201ENST00000457863 ZNF142P52746 1687 aaPredicted RBP2.41□□□□□ -2.02
HMGB3P30-201ENST00000457863 AFDNP55196 1824 aaKnown RBP2.4□□□□□ -2.02
HMGB3P30-201ENST00000457863 MPDZO75970 2070 aa2.4□□□□□ -2.02
HMGB3P30-201ENST00000457863 XRN1Q8IZH2 1706 aaKnown RBP2.4□□□□□ -2.02
HMGB3P30-201ENST00000457863 PDCD11Q14690 1871 aaKnown RBP2.4□□□□□ -2.03
HMGB3P30-201ENST00000457863 IGHV3OR16-8A0A075B7F1 116 aa2.4□□□□□ -2.03
HMGB3P30-201ENST00000457863 PRB4P10163 310 aaPredicted RBP2.4□□□□□ -2.03
HMGB3P30-201ENST00000457863 EFNA4P52798 201 aa2.4□□□□□ -2.03
HMGB3P30-201ENST00000457863 UBE2D3P61077 147 aa2.4□□□□□ -2.03
HMGB3P30-201ENST00000457863 UBE2D2P62837 147 aa2.4□□□□□ -2.03
HMGB3P30-201ENST00000457863 KLKP1Q107X0 134 aa2.4□□□□□ -2.03
HMGB3P30-201ENST00000457863 IGFBP7Q16270 282 aa2.4□□□□□ -2.03
HMGB3P30-201ENST00000457863 KRTAP25-1Q3LHN0 102 aa2.4□□□□□ -2.03
HMGB3P30-201ENST00000457863 KPRPQ5T749 579 aaPredicted RBP2.4□□□□□ -2.03
HMGB3P30-201ENST00000457863 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.4□□□□□ -2.03
HMGB3P30-201ENST00000457863 ABCA7Q8IZY2 2146 aa2.4□□□□□ -2.03
HMGB3P30-201ENST00000457863 FAM167A-AS1Q96KT0 104 aa2.4□□□□□ -2.03
HMGB3P30-201ENST00000457863 S4R3C0 116 aa2.4□□□□□ -2.03
HMGB3P30-201ENST00000457863 MYOM1P52179 1685 aa2.4□□□□□ -2.03
HMGB3P30-201ENST00000457863 DOCK11Q5JSL3 2073 aa2.4□□□□□ -2.03
HMGB3P30-201ENST00000457863 NINQ8N4C6 2090 aa2.4□□□□□ -2.03
HMGB3P30-201ENST00000457863 LAMA4Q16363 1823 aa2.4□□□□□ -2.03
HMGB3P30-201ENST00000457863 CDC42BPBQ9Y5S2 1711 aa2.39□□□□□ -2.03
HMGB3P30-201ENST00000457863 SIPA1L3O60292 1781 aaPredicted RBP2.39□□□□□ -2.03
HMGB3P30-201ENST00000457863 DLG5Q8TDM6 1919 aa2.39□□□□□ -2.03
HMGB3P30-201ENST00000457863 MYOFQ9NZM1 2061 aa2.39□□□□□ -2.03
HMGB3P30-201ENST00000457863 IGKV3D-15A0A087WSY6 115 aa2.39□□□□□ -2.03
HMGB3P30-201ENST00000457863 TRAV12-1A0A0B4J245 112 aa2.39□□□□□ -2.03
HMGB3P30-201ENST00000457863 A0A0J9YX75 114 aa2.39□□□□□ -2.03
HMGB3P30-201ENST00000457863 CXorf51AA0A1B0GTR3 108 aa2.39□□□□□ -2.03
HMGB3P30-201ENST00000457863 BCE1O60756 84 aa2.39□□□□□ -2.03
HMGB3P30-201ENST00000457863 ZNF79Q15937 498 aa2.39□□□□□ -2.03
HMGB3P30-201ENST00000457863 LINC00483Q53H64 154 aa2.39□□□□□ -2.03
HMGB3P30-201ENST00000457863 KRTAP26-1Q6PEX3 210 aa2.39□□□□□ -2.03
HMGB3P30-201ENST00000457863 ZNF833PQ6ZTB9 187 aa2.39□□□□□ -2.03
HMGB3P30-201ENST00000457863 TIMM21Q9BVV7 248 aa2.39□□□□□ -2.03
HMGB3P30-201ENST00000457863 FREM3P0C091 2139 aa2.39□□□□□ -2.03
HMGB3P30-201ENST00000457863 HMGXB3Q12766 1538 aa2.38□□□□□ -2.03
HMGB3P30-201ENST00000457863 CLASP1Q7Z460 1538 aa2.38□□□□□ -2.03
HMGB3P30-201ENST00000457863 IGLV3-16A0A075B6K0 115 aa2.38□□□□□ -2.03
HMGB3P30-201ENST00000457863 UMAD1C9J7I0 102 aa2.38□□□□□ -2.03
HMGB3P30-201ENST00000457863 ACYP1P07311 99 aa2.38□□□□□ -2.03
HMGB3P30-201ENST00000457863 ZNF791Q3KP31 576 aaPredicted RBP2.38□□□□□ -2.03
HMGB3P30-201ENST00000457863 C2orf82Q6UX34 121 aa2.38□□□□□ -2.03
HMGB3P30-201ENST00000457863 LINC00612Q8N6U2 182 aa2.38□□□□□ -2.03
HMGB3P30-201ENST00000457863 MAPK1IP1LQ8NDC0 245 aa2.38□□□□□ -2.03
HMGB3P30-201ENST00000457863 MANBALQ9NQG1 85 aa2.38□□□□□ -2.03
HMGB3P30-201ENST00000457863 C22orf24Q9Y442 160 aa2.38□□□□□ -2.03
HMGB3P30-201ENST00000457863 LHFPL6Q9Y693 200 aa2.38□□□□□ -2.03
HMGB3P30-201ENST00000457863 ARFGEF1Q9Y6D6 1849 aa2.38□□□□□ -2.03
HMGB3P30-201ENST00000457863 COL4A5P29400 1685 aa2.37□□□□□ -2.03
HMGB3P30-201ENST00000457863 PLCH1Q4KWH8 1693 aa2.37□□□□□ -2.03
HMGB3P30-201ENST00000457863 ASXL1Q8IXJ9 1541 aa2.37□□□□□ -2.03
HMGB3P30-201ENST00000457863 KIAA0100Q14667 2235 aaKnown RBP2.37□□□□□ -2.03
HMGB3P30-201ENST00000457863 A0A0G2JND7 137 aa2.37□□□□□ -2.03
HMGB3P30-201ENST00000457863 A0A1W2PNM2 257 aa2.37□□□□□ -2.03
HMGB3P30-201ENST00000457863 MOBPQ13875 183 aa2.37□□□□□ -2.03
HMGB3P30-201ENST00000457863 ELOBQ15370 118 aa2.37□□□□□ -2.03
HMGB3P30-201ENST00000457863 TMEM170BQ5T4T1 132 aa2.37□□□□□ -2.03
HMGB3P30-201ENST00000457863 LINC00643Q86TS7 51 aa2.37□□□□□ -2.03
HMGB3P30-201ENST00000457863 Q8N6K4 173 aa2.37□□□□□ -2.03
HMGB3P30-201ENST00000457863 PRO1854Q9UHT4 67 aa2.37□□□□□ -2.03
HMGB3P30-201ENST00000457863 GLI2P10070 1586 aa2.36□□□□□ -2.03
HMGB3P30-201ENST00000457863 PRR14LQ5THK1 2151 aa2.36□□□□□ -2.03
HMGB3P30-201ENST00000457863 LAMC1P11047 1609 aa2.36□□□□□ -2.03
HMGB3P30-201ENST00000457863 TMSB15BA0A087X1C1 80 aa2.36□□□□□ -2.03
HMGB3P30-201ENST00000457863 PSCAO43653 123 aa2.36□□□□□ -2.03
HMGB3P30-201ENST00000457863 SFTA3P0C7M3 94 aa2.36□□□□□ -2.03
HMGB3P30-201ENST00000457863 ERHP84090 104 aaKnown RBP2.36□□□□□ -2.03
HMGB3P30-201ENST00000457863 Q5VV11 94 aa2.36□□□□□ -2.03
HMGB3P30-201ENST00000457863 NDUFA11Q86Y39 141 aa2.36□□□□□ -2.03
HMGB3P30-201ENST00000457863 FAM223AQ8IWN6 122 aa2.36□□□□□ -2.03
HMGB3P30-201ENST00000457863 SCRT1Q9BWW7 348 aa2.36□□□□□ -2.03
HMGB3P30-201ENST00000457863 PLA2R1Q13018 1463 aa2.36□□□□□ -2.03
HMGB3P30-201ENST00000457863 SYCP2Q9BX26 1530 aa2.36□□□□□ -2.03
HMGB3P30-201ENST00000457863 ARHGEF5Q12774 1597 aa2.36□□□□□ -2.03
HMGB3P30-201ENST00000457863 CUL9Q8IWT3 2517 aa2.35□□□□□ -2.03
HMGB3P30-201ENST00000457863 PREX1Q8TCU6 1659 aa2.35□□□□□ -2.03
HMGB3P30-201ENST00000457863 BAZ2BQ9UIF8 2168 aaKnown RBP2.35□□□□□ -2.03
HMGB3P30-201ENST00000457863 TRBV7-3A0A075B6L6 115 aa2.35□□□□□ -2.03
HMGB3P30-201ENST00000457863 TRAV12-3A0A0B4J271 114 aa2.35□□□□□ -2.03
HMGB3P30-201ENST00000457863 TRAV22A0A0B4J277 110 aa2.35□□□□□ -2.03
HMGB3P30-201ENST00000457863 TMEM30CPA0ZSE6 113 aa2.35□□□□□ -2.03
HMGB3P30-201ENST00000457863 TFF1P04155 84 aa2.35□□□□□ -2.03
HMGB3P30-201ENST00000457863 SMIM13P0DJ93 91 aa2.35□□□□□ -2.03
HMGB3P30-201ENST00000457863 SMIM11AP58511 58 aa2.35□□□□□ -2.03
HMGB3P30-201ENST00000457863 ZNF818PQ6ZRF7 136 aa2.35□□□□□ -2.03
HMGB3P30-201ENST00000457863 C9orf163Q8N9P6 203 aa2.35□□□□□ -2.03
HMGB3P30-201ENST00000457863 IFI27L1Q96BM0 104 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms