RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 DPH3P1Q9H4G8 78 aa12.19□□□□□ -0.46
PDLIM2-215ENST00000456545 FAT2Q9NYQ8 4349 aa12.19□□□□□ -0.46
PDLIM2-215ENST00000456545 CTRLP40313 264 aa12.18□□□□□ -0.46
PDLIM2-215ENST00000456545 BORCS7Q96B45 105 aa12.18□□□□□ -0.46
PDLIM2-215ENST00000456545 FAM74A3Q4VXF1 159 aa12.17□□□□□ -0.46
PDLIM2-215ENST00000456545 TMEM97Q5BJF2 176 aa12.17□□□□□ -0.46
PDLIM2-215ENST00000456545 SUMO4Q6EEV6 95 aa12.17□□□□□ -0.46
PDLIM2-215ENST00000456545 DAZ4Q86SG3 579 aaKnown RBP12.17□□□□□ -0.46
PDLIM2-215ENST00000456545 DNAJC30Q96LL9 226 aa12.17□□□□□ -0.46
PDLIM2-215ENST00000456545 DAZ3Q9NR90 486 aaKnown RBP12.17□□□□□ -0.46
PDLIM2-215ENST00000456545 HECTD4Q9Y4D8 3996 aa12.17□□□□□ -0.46
PDLIM2-215ENST00000456545 TRBV6-8A0A0A6YYG3 113 aa12.16□□□□□ -0.46
PDLIM2-215ENST00000456545 TRAV8-3A0A0A6YYJ7 113 aa12.16□□□□□ -0.46
PDLIM2-215ENST00000456545 ELOBQ15370 118 aa12.16□□□□□ -0.46
PDLIM2-215ENST00000456545 TMEM241Q24JQ0 296 aa12.16□□□□□ -0.46
PDLIM2-215ENST00000456545 LINC01551Q86U37 167 aa12.16□□□□□ -0.46
PDLIM2-215ENST00000456545 NIT1Q86X76 327 aa12.16□□□□□ -0.46
PDLIM2-215ENST00000456545 Q8N3U1 123 aa12.16□□□□□ -0.46
PDLIM2-215ENST00000456545 C15orf54Q8N8G6 183 aa12.16□□□□□ -0.46
PDLIM2-215ENST00000456545 PGLYRP4Q96LB8 373 aa12.16□□□□□ -0.46
PDLIM2-215ENST00000456545 TM2D2Q9BX73 214 aa12.16□□□□□ -0.46
PDLIM2-215ENST00000456545 M0QY20 66 aa12.15□□□□□ -0.46
PDLIM2-215ENST00000456545 LAGE3Q14657 143 aa12.15□□□□□ -0.46
PDLIM2-215ENST00000456545 RASL11AQ6T310 242 aa12.15□□□□□ -0.46
PDLIM2-215ENST00000456545 GTSF1Q8WW33 167 aa12.15□□□□□ -0.46
PDLIM2-215ENST00000456545 CHCHD5Q9BSY4 110 aa12.15□□□□□ -0.46
PDLIM2-215ENST00000456545 PGPEP1Q9NXJ5 209 aa12.15□□□□□ -0.46
PDLIM2-215ENST00000456545 A0A087WTM6 91 aa12.14□□□□□ -0.47
PDLIM2-215ENST00000456545 CT83Q5H943 113 aa12.14□□□□□ -0.47
PDLIM2-215ENST00000456545 OSTCQ9NRP0 149 aa12.14□□□□□ -0.47
PDLIM2-215ENST00000456545 KRTAP10-2P60368 255 aa12.13□□□□□ -0.47
PDLIM2-215ENST00000456545 RAB14P61106 215 aa12.13□□□□□ -0.47
PDLIM2-215ENST00000456545 PKIAP61925 76 aa12.13□□□□□ -0.47
PDLIM2-215ENST00000456545 CHCHD7Q9BUK0 85 aa12.13□□□□□ -0.47
PDLIM2-215ENST00000456545 CNFNQ9BYD5 112 aa12.13□□□□□ -0.47
PDLIM2-215ENST00000456545 SMDT1Q9H4I9 107 aa12.13□□□□□ -0.47
PDLIM2-215ENST00000456545 NIT2Q9NQR4 276 aa12.13□□□□□ -0.47
PDLIM2-215ENST00000456545 KLK12Q9UKR0 248 aa12.13□□□□□ -0.47
PDLIM2-215ENST00000456545 ADIRFQ15847 76 aa12.12□□□□□ -0.47
PDLIM2-215ENST00000456545 RMI2Q96E14 147 aa12.12□□□□□ -0.47
PDLIM2-215ENST00000456545 PKD1P98161 4303 aa12.12□□□□□ -0.47
PDLIM2-215ENST00000456545 TRBV25-1A0A075B6N4 114 aa12.11□□□□□ -0.47
PDLIM2-215ENST00000456545 TSKUQ8WUA8 353 aa12.11□□□□□ -0.47
PDLIM2-215ENST00000456545 NAT8Q9UHE5 227 aa12.11□□□□□ -0.47
PDLIM2-215ENST00000456545 FOXA3P55318 350 aaPredicted RBP12.1□□□□□ -0.47
PDLIM2-215ENST00000456545 SRSF3P84103 164 aaKnown RBP12.1□□□□□ -0.47
PDLIM2-215ENST00000456545 UBE2WQ96B02 151 aa12.1□□□□□ -0.47
PDLIM2-215ENST00000456545 GFRA4Q9GZZ7 299 aa12.1□□□□□ -0.47
PDLIM2-215ENST00000456545 COX11Q9Y6N1 276 aa12.1□□□□□ -0.47
PDLIM2-215ENST00000456545 IGHV1-24A0A0C4DH33 117 aa12.09□□□□□ -0.47
PDLIM2-215ENST00000456545 A0A1B0GUT8 65 aa12.09□□□□□ -0.47
PDLIM2-215ENST00000456545 HIGD1CA8MV81 97 aa12.09□□□□□ -0.47
PDLIM2-215ENST00000456545 C9JQL5 133 aa12.09□□□□□ -0.47
PDLIM2-215ENST00000456545 RPL23P62829 140 aaKnown RBP12.09□□□□□ -0.47
PDLIM2-215ENST00000456545 ISOC2Q96AB3 205 aa12.09□□□□□ -0.47
PDLIM2-215ENST00000456545 IGKV2D-24A0A075B6R9 120 aa12.08□□□□□ -0.48
PDLIM2-215ENST00000456545 FAM231BA6NCW3 169 aa12.08□□□□□ -0.48
PDLIM2-215ENST00000456545 CRPP02741 224 aa12.08□□□□□ -0.48
PDLIM2-215ENST00000456545 ANGP03950 147 aaKnown RBP12.08□□□□□ -0.48
PDLIM2-215ENST00000456545 FUSP35637 526 aaKnown RBP eCLIP12.08□□□□□ -0.48
PDLIM2-215ENST00000456545 Q0VG73 95 aa12.08□□□□□ -0.48
PDLIM2-215ENST00000456545 GAGE6Q13070 117 aa12.08□□□□□ -0.48
PDLIM2-215ENST00000456545 CDPF1Q6NVV7 123 aa12.08□□□□□ -0.48
PDLIM2-215ENST00000456545 NTM-AS1Q6ZSK4 140 aa12.08□□□□□ -0.48
PDLIM2-215ENST00000456545 TRAV26-2A0A0B4J265 109 aa12.07□□□□□ -0.48
PDLIM2-215ENST00000456545 ATRAIDQ6UW56 229 aa12.07□□□□□ -0.48
PDLIM2-215ENST00000456545 GATD1Q8NB37 220 aa12.07□□□□□ -0.48
PDLIM2-215ENST00000456545 FRZBQ92765 325 aa12.07□□□□□ -0.48
PDLIM2-215ENST00000456545 RIGQ13278 110 aa12.06□□□□□ -0.48
PDLIM2-215ENST00000456545 COTL1Q14019 142 aa12.06□□□□□ -0.48
PDLIM2-215ENST00000456545 MPV17L2Q567V2 206 aa12.06□□□□□ -0.48
PDLIM2-215ENST00000456545 V9GYV3 84 aa12.06□□□□□ -0.48
PDLIM2-215ENST00000456545 LRCOL1A6NCL2 159 aa12.05□□□□□ -0.48
PDLIM2-215ENST00000456545 IQCJQ1A5X6 159 aa12.05□□□□□ -0.48
PDLIM2-215ENST00000456545 DEFB104AQ8WTQ1 72 aa12.05□□□□□ -0.48
PDLIM2-215ENST00000456545 TMEM243Q9BU79 118 aa12.05□□□□□ -0.48
PDLIM2-215ENST00000456545 PKHD1P08F94 4074 aa12.04□□□□□ -0.48
PDLIM2-215ENST00000456545 UBE2L6O14933 153 aa12.04□□□□□ -0.48
PDLIM2-215ENST00000456545 Q8N976 141 aa12.04□□□□□ -0.48
PDLIM2-215ENST00000456545 NAT8BQ9UHF3 227 aa12.04□□□□□ -0.48
PDLIM2-215ENST00000456545 IGLV5-52A0A0A0MRZ9 124 aa12.03□□□□□ -0.48
PDLIM2-215ENST00000456545 CDK2AP2O75956 126 aa12.03□□□□□ -0.48
PDLIM2-215ENST00000456545 AMTP48728 403 aa12.03□□□□□ -0.48
PDLIM2-215ENST00000456545 Q8N814 137 aa12.03□□□□□ -0.48
PDLIM2-215ENST00000456545 NUP35Q8NFH5 326 aa12.03□□□□□ -0.48
PDLIM2-215ENST00000456545 RPL39LQ96EH5 51 aaKnown RBP12.03□□□□□ -0.48
PDLIM2-215ENST00000456545 C1orf43Q9BWL3 253 aa12.03□□□□□ -0.48
PDLIM2-215ENST00000456545 TMEM191AQ9H0A3 160 aa12.03□□□□□ -0.48
PDLIM2-215ENST00000456545 DYNC1H1Q14204 4646 aaKnown RBP12.03□□□□□ -0.48
PDLIM2-215ENST00000456545 LECT2O14960 151 aa12.02□□□□□ -0.49
PDLIM2-215ENST00000456545 RBX1P62877 108 aa12.02□□□□□ -0.49
PDLIM2-215ENST00000456545 NTN5Q8WTR8 489 aaPredicted RBP12.02□□□□□ -0.49
PDLIM2-215ENST00000456545 BAALCQ8WXS3 180 aa12.02□□□□□ -0.49
PDLIM2-215ENST00000456545 DNAH11Q96DT5 4516 aa12.01□□□□□ -0.49
PDLIM2-215ENST00000456545 PMCHP20382 165 aa12.01□□□□□ -0.49
PDLIM2-215ENST00000456545 GCSHP23434 173 aa12.01□□□□□ -0.49
PDLIM2-215ENST00000456545 ENHOQ6UWT2 76 aa12□□□□□ -0.49
PDLIM2-215ENST00000456545 LINC00269Q8N2A0 174 aa12□□□□□ -0.49
PDLIM2-215ENST00000456545 KIAA1109Q2LD37 5005 aa12□□□□□ -0.49
PDLIM2-215ENST00000456545 SMIM27A0A1W2PRY6 76 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms