RNA–Protein interactions for RNA: ENST00000456173.6

NEDD4L-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4L, Length 4,978 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-208ENST00000456173 TRBV7-3A0A075B6L6 115 aa9.48□□□□□ -0.89
NEDD4L-208ENST00000456173 NREPQ16612 68 aa9.48□□□□□ -0.89
NEDD4L-208ENST00000456173 HIST2H2BCQ6DN03 193 aa9.48□□□□□ -0.89
NEDD4L-208ENST00000456173 Q6Q795 121 aa9.47□□□□□ -0.89
NEDD4L-208ENST00000456173 MIR7-3HGQ8N6C7 128 aa9.47□□□□□ -0.89
NEDD4L-208ENST00000456173 PRSS33Q8NF86 280 aa9.47□□□□□ -0.89
NEDD4L-208ENST00000456173 SNURFQ9Y675 71 aa9.47□□□□□ -0.89
NEDD4L-208ENST00000456173 VSIG2Q96IQ7 327 aa9.47□□□□□ -0.89
NEDD4L-208ENST00000456173 IGHV3-30P01768 117 aa9.47□□□□□ -0.89
NEDD4L-208ENST00000456173 IGHV3-30-5P0DP03 117 aa9.47□□□□□ -0.89
NEDD4L-208ENST00000456173 CRIP1P50238 77 aa9.47□□□□□ -0.89
NEDD4L-208ENST00000456173 DENND4CQ5VZ89 1909 aa9.47□□□□□ -0.89
NEDD4L-208ENST00000456173 IGHV7-4-1A0A0J9YVY3 117 aa9.47□□□□□ -0.89
NEDD4L-208ENST00000456173 IGLV1-44P01699 117 aa9.47□□□□□ -0.89
NEDD4L-208ENST00000456173 FANCD2OSQ96PS1 177 aa9.47□□□□□ -0.89
NEDD4L-208ENST00000456173 A0A096LPF7 62 aa9.46□□□□□ -0.89
NEDD4L-208ENST00000456173 TIMM17BO60830 172 aa9.46□□□□□ -0.89
NEDD4L-208ENST00000456173 C20orf203Q8NBC4 194 aa9.46□□□□□ -0.89
NEDD4L-208ENST00000456173 CTSZQ9UBR2 303 aa9.46□□□□□ -0.89
NEDD4L-208ENST00000456173 ZNF561-AS1K7EIQ3 104 aa9.46□□□□□ -0.9
NEDD4L-208ENST00000456173 Q6ZS92 163 aa9.46□□□□□ -0.9
NEDD4L-208ENST00000456173 IGLV2-23P01705 113 aa9.45□□□□□ -0.9
NEDD4L-208ENST00000456173 NCR3O14931 201 aa9.45□□□□□ -0.9
NEDD4L-208ENST00000456173 SLPIP03973 132 aa9.45□□□□□ -0.9
NEDD4L-208ENST00000456173 Q6ZS46 218 aa9.45□□□□□ -0.9
NEDD4L-208ENST00000456173 WDR87Q6ZQQ6 2873 aa9.45□□□□□ -0.9
NEDD4L-208ENST00000456173 IGLV11-55A0A075B6I3 123 aa9.45□□□□□ -0.9
NEDD4L-208ENST00000456173 IGHV1-69P01742 117 aa9.45□□□□□ -0.9
NEDD4L-208ENST00000456173 U3KQK5 164 aa9.45□□□□□ -0.9
NEDD4L-208ENST00000456173 CLPSL1A2RUU4 121 aa9.45□□□□□ -0.9
NEDD4L-208ENST00000456173 CRIP2P52943 208 aaPredicted RBP9.44□□□□□ -0.9
NEDD4L-208ENST00000456173 FNDC1Q4ZHG4 1894 aaPredicted RBP9.44□□□□□ -0.9
NEDD4L-208ENST00000456173 HIST2H2BDQ6DRA6 164 aa9.44□□□□□ -0.9
NEDD4L-208ENST00000456173 RNF185Q96GF1 192 aa9.44□□□□□ -0.9
NEDD4L-208ENST00000456173 SCXQ7RTU7 201 aa9.44□□□□□ -0.9
NEDD4L-208ENST00000456173 NKAPP1Q8N9T2 125 aa9.44□□□□□ -0.9
NEDD4L-208ENST00000456173 KIAA1671Q9BY89 1806 aa9.44□□□□□ -0.9
NEDD4L-208ENST00000456173 NOTCH4Q99466 2003 aa9.44□□□□□ -0.9
NEDD4L-208ENST00000456173 PCNX3Q9H6A9 2034 aa9.44□□□□□ -0.9
NEDD4L-208ENST00000456173 ZNF883P0CG24 379 aa9.44□□□□□ -0.9
NEDD4L-208ENST00000456173 FUSP35637 526 aaKnown RBP eCLIP9.44□□□□□ -0.92e-6■□□□□ 8.7
NEDD4L-208ENST00000456173 GAS8-AS1O95177 125 aa9.43□□□□□ -0.9
NEDD4L-208ENST00000456173 ZNF22P17026 224 aaPredicted RBP9.43□□□□□ -0.9
NEDD4L-208ENST00000456173 H7C423 109 aa9.43□□□□□ -0.9
NEDD4L-208ENST00000456173 C9orf47Q6ZRZ4 202 aa9.43□□□□□ -0.9
NEDD4L-208ENST00000456173 CDIP1Q9H305 208 aa9.43□□□□□ -0.9
NEDD4L-208ENST00000456173 TMEM256-PLSCR3K7ERE1 68 aa9.43□□□□□ -0.9
NEDD4L-208ENST00000456173 LHBP01229 141 aa9.43□□□□□ -0.9
NEDD4L-208ENST00000456173 MP68P56378 58 aa9.42□□□□□ -0.9
NEDD4L-208ENST00000456173 LINC00526Q96FQ7 95 aa9.42□□□□□ -0.9
NEDD4L-208ENST00000456173 HHLA3Q9XRX5 114 aa9.42□□□□□ -0.9
NEDD4L-208ENST00000456173 ANGP03950 147 aaKnown RBP9.42□□□□□ -0.9
NEDD4L-208ENST00000456173 BPESC1Q9GZL8 116 aa9.42□□□□□ -0.9
NEDD4L-208ENST00000456173 TANC2Q9HCD6 1990 aa9.42□□□□□ -0.9
NEDD4L-208ENST00000456173 MKI67P46013 3256 aaKnown RBP9.42□□□□□ -0.9
NEDD4L-208ENST00000456173 C1orf229Q6ZS94 237 aaPredicted RBP9.41□□□□□ -0.9
NEDD4L-208ENST00000456173 TMEM223A0PJW6 202 aa9.41□□□□□ -0.9
NEDD4L-208ENST00000456173 CXCL5P42830 114 aa9.41□□□□□ -0.9
NEDD4L-208ENST00000456173 TIRAPP58753 221 aa9.41□□□□□ -0.9
NEDD4L-208ENST00000456173 AJUBAQ96IF1 538 aa9.41□□□□□ -0.9
NEDD4L-208ENST00000456173 PLXNB3Q9ULL4 1909 aa9.4□□□□□ -0.9
NEDD4L-208ENST00000456173 RNF138Q8WVD3 245 aa9.4□□□□□ -0.9
NEDD4L-208ENST00000456173 TICRRQ7Z2Z1 1910 aa9.4□□□□□ -0.9
NEDD4L-208ENST00000456173 LST1O00453 97 aa9.4□□□□□ -0.9
NEDD4L-208ENST00000456173 PRR14LQ5THK1 2151 aa9.4□□□□□ -0.9
NEDD4L-208ENST00000456173 MYCNOSP40205 109 aa9.4□□□□□ -0.9
NEDD4L-208ENST00000456173 PIK3CD-AS1Q5SR53 167 aa9.4□□□□□ -0.9
NEDD4L-208ENST00000456173 NRGNQ92686 78 aa9.4□□□□□ -0.9
NEDD4L-208ENST00000456173 Q8N7P7 452 aa9.4□□□□□ -0.91
NEDD4L-208ENST00000456173 MDFICQ9P1T7 246 aa9.4□□□□□ -0.91
NEDD4L-208ENST00000456173 IGHV7-81A0A0B4J1V7 117 aa9.39□□□□□ -0.91
NEDD4L-208ENST00000456173 A8MZ25 164 aa9.39□□□□□ -0.91
NEDD4L-208ENST00000456173 COX6B1P14854 86 aa9.39□□□□□ -0.91
NEDD4L-208ENST00000456173 C20orf173Q96LM9 149 aa9.39□□□□□ -0.91
NEDD4L-208ENST00000456173 KAAG1Q9UBP8 84 aa9.39□□□□□ -0.91
NEDD4L-208ENST00000456173 IGLV2-11P01706 119 aa9.39□□□□□ -0.91
NEDD4L-208ENST00000456173 EIF4EBP1Q13541 118 aaPredicted RBP9.39□□□□□ -0.91
NEDD4L-208ENST00000456173 NOP10Q9NPE3 64 aaKnown RBP9.39□□□□□ -0.91
NEDD4L-208ENST00000456173 BRCA2P51587 3418 aa9.38□□□□□ -0.91
NEDD4L-208ENST00000456173 LINC00308Q8TCZ7 52 aa9.38□□□□□ -0.91
NEDD4L-208ENST00000456173 IGLV10-54A0A075B6I4 117 aa9.38□□□□□ -0.91
NEDD4L-208ENST00000456173 TMEM263Q8WUH6 116 aaKnown RBP9.38□□□□□ -0.91
NEDD4L-208ENST00000456173 CDKN2A-AS1Q9UH64 79 aa9.38□□□□□ -0.91
NEDD4L-208ENST00000456173 RANBP2P49792 3224 aaKnown RBP9.38□□□□□ -0.91
NEDD4L-208ENST00000456173 A0A087WVE0 104 aa9.38□□□□□ -0.91
NEDD4L-208ENST00000456173 SMIM26A0A096LP01 95 aa9.38□□□□□ -0.91
NEDD4L-208ENST00000456173 NDUFS5O43920 106 aa9.38□□□□□ -0.91
NEDD4L-208ENST00000456173 UCNP55089 124 aa9.37□□□□□ -0.91
NEDD4L-208ENST00000456173 ELANEP08246 267 aa9.37□□□□□ -0.91
NEDD4L-208ENST00000456173 LINC01619G3V211 115 aa9.37□□□□□ -0.91
NEDD4L-208ENST00000456173 WT1P19544 449 aaPredicted RBP9.37□□□□□ -0.91
NEDD4L-208ENST00000456173 MED14OSP0DP75 135 aa9.36□□□□□ -0.91
NEDD4L-208ENST00000456173 ATP5EP2Q5VTU8 51 aa9.36□□□□□ -0.91
NEDD4L-208ENST00000456173 HIGD2BQ4VC39 106 aa9.36□□□□□ -0.91
NEDD4L-208ENST00000456173 SOSTDC1Q6X4U4 206 aa9.36□□□□□ -0.91
NEDD4L-208ENST00000456173 RETNQ9HD89 108 aa9.36□□□□□ -0.91
NEDD4L-208ENST00000456173 CMC4P56277 68 aaPredicted RBP9.36□□□□□ -0.91
NEDD4L-208ENST00000456173 IGF1P05019 195 aa9.36□□□□□ -0.91
NEDD4L-208ENST00000456173 UBE2D3P61077 147 aa9.35□□□□□ -0.91
NEDD4L-208ENST00000456173 UBE2D2P62837 147 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms