RNA–Protein interactions for RNA: ENST00000455359.5

HMGXB4-204, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 1,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-204ENST00000455359 GAGE5Q13069 117 aa9.89□□□□□ -0.83
HMGXB4-204ENST00000455359 ESRGQ1W209 222 aa9.89□□□□□ -0.83
HMGXB4-204ENST00000455359 GAGE13Q4V321 117 aa9.89□□□□□ -0.83
HMGXB4-204ENST00000455359 LYPD5Q6UWN5 251 aa9.89□□□□□ -0.83
HMGXB4-204ENST00000455359 UBE2DNLQ8IWF7 75 aa9.89□□□□□ -0.83
HMGXB4-204ENST00000455359 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.89□□□□□ -0.83
HMGXB4-204ENST00000455359 ATP6V0E2Q8NHE4 81 aa9.89□□□□□ -0.83
HMGXB4-204ENST00000455359 UPK3BQ9BT76 320 aa9.89□□□□□ -0.83
HMGXB4-204ENST00000455359 RAB4AP20338 218 aa9.88□□□□□ -0.83
HMGXB4-204ENST00000455359 UBE2D3P61077 147 aa9.88□□□□□ -0.83
HMGXB4-204ENST00000455359 UBE2D2P62837 147 aa9.88□□□□□ -0.83
HMGXB4-204ENST00000455359 FAM104BQ5XKR9 115 aa9.88□□□□□ -0.83
HMGXB4-204ENST00000455359 DAZ4Q86SG3 579 aaKnown RBP9.88□□□□□ -0.83
HMGXB4-204ENST00000455359 NEXN-AS1Q8NBZ9 246 aa9.88□□□□□ -0.83
HMGXB4-204ENST00000455359 ZNRF2Q8NHG8 242 aa9.88□□□□□ -0.83
HMGXB4-204ENST00000455359 RNF185Q96GF1 192 aa9.88□□□□□ -0.83
HMGXB4-204ENST00000455359 GTSF1LQ9H1H1 148 aa9.88□□□□□ -0.83
HMGXB4-204ENST00000455359 NIT2Q9NQR4 276 aa9.88□□□□□ -0.83
HMGXB4-204ENST00000455359 DAZ3Q9NR90 486 aaKnown RBP9.88□□□□□ -0.83
HMGXB4-204ENST00000455359 MRPS16Q9Y3D3 137 aaKnown RBP9.88□□□□□ -0.83
HMGXB4-204ENST00000455359 TNFRSF18Q9Y5U5 241 aa9.88□□□□□ -0.83
HMGXB4-204ENST00000455359 NACAE9PAV3 2078 aa9.88□□□□□ -0.83
HMGXB4-204ENST00000455359 LY6G6CO95867 125 aa9.87□□□□□ -0.83
HMGXB4-204ENST00000455359 COX19Q49B96 90 aa9.87□□□□□ -0.83
HMGXB4-204ENST00000455359 TMEM97Q5BJF2 176 aa9.87□□□□□ -0.83
HMGXB4-204ENST00000455359 AMN1Q8IY45 258 aa9.87□□□□□ -0.83
HMGXB4-204ENST00000455359 LINC00588Q9Y4M8 146 aa9.87□□□□□ -0.83
HMGXB4-204ENST00000455359 TRBV6-5A0A0K0K1A5 114 aa9.86□□□□□ -0.83
HMGXB4-204ENST00000455359 PPBPP02775 128 aa9.86□□□□□ -0.83
HMGXB4-204ENST00000455359 Q9UF83 564 aa9.86□□□□□ -0.83
HMGXB4-204ENST00000455359 ALMS1Q8TCU4 4167 aa9.86□□□□□ -0.83
HMGXB4-204ENST00000455359 LELP1Q5T871 98 aa9.85□□□□□ -0.83
HMGXB4-204ENST00000455359 DNAH1Q9P2D7 4330 aa9.85□□□□□ -0.83
HMGXB4-204ENST00000455359 VPS13DQ5THJ4 4388 aa9.85□□□□□ -0.83
HMGXB4-204ENST00000455359 TRAV26-2A0A0B4J265 109 aa9.84□□□□□ -0.83
HMGXB4-204ENST00000455359 URGCP-MRPS24S4R325 110 aa9.84□□□□□ -0.83
HMGXB4-204ENST00000455359 KMT2CQ8NEZ4 4911 aaKnown RBP9.84□□□□□ -0.83
HMGXB4-204ENST00000455359 TRAV8-6A0A0B4J262 113 aa9.83□□□□□ -0.84
HMGXB4-204ENST00000455359 MRPL51Q4U2R6 128 aaKnown RBP9.83□□□□□ -0.84
HMGXB4-204ENST00000455359 TRBV24-1A0A075B6N3 115 aa9.82□□□□□ -0.84
HMGXB4-204ENST00000455359 K7EP13 123 aa9.82□□□□□ -0.84
HMGXB4-204ENST00000455359 PHOX2AO14813 284 aa9.82□□□□□ -0.84
HMGXB4-204ENST00000455359 CKS2P33552 79 aa9.82□□□□□ -0.84
HMGXB4-204ENST00000455359 OR10J3Q5JRS4 329 aa9.82□□□□□ -0.84
HMGXB4-204ENST00000455359 GNB1LQ9BYB4 327 aa9.82□□□□□ -0.84
HMGXB4-204ENST00000455359 SMCO4Q9NRQ5 59 aa9.82□□□□□ -0.84
HMGXB4-204ENST00000455359 SACSQ9NZJ4 4579 aa9.82□□□□□ -0.84
HMGXB4-204ENST00000455359 MT-ND6P03923 174 aa9.82□□□□□ -0.84
HMGXB4-204ENST00000455359 ATRAIDQ6UW56 229 aa9.82□□□□□ -0.84
HMGXB4-204ENST00000455359 TMEM136Q6ZRR5 245 aa9.82□□□□□ -0.84
HMGXB4-204ENST00000455359 ORMDL3Q8N138 153 aa9.82□□□□□ -0.84
HMGXB4-204ENST00000455359 C20orf78Q9BR46 151 aa9.82□□□□□ -0.84
HMGXB4-204ENST00000455359 ST20Q9HBF5 79 aa9.82□□□□□ -0.84
HMGXB4-204ENST00000455359 LAMTOR2Q9Y2Q5 125 aa9.82□□□□□ -0.84
HMGXB4-204ENST00000455359 TRBV6-8A0A0A6YYG3 113 aa9.81□□□□□ -0.84
HMGXB4-204ENST00000455359 HLA-DQA1P01909 254 aa9.81□□□□□ -0.84
HMGXB4-204ENST00000455359 ELOBQ15370 118 aa9.81□□□□□ -0.84
HMGXB4-204ENST00000455359 NRACQ8N912 160 aa9.81□□□□□ -0.84
HMGXB4-204ENST00000455359 RPL39LQ96EH5 51 aaKnown RBP9.81□□□□□ -0.84
HMGXB4-204ENST00000455359 Q9H8V8 135 aa9.81□□□□□ -0.84
HMGXB4-204ENST00000455359 LYSTQ99698 3801 aa9.8□□□□□ -0.84
HMGXB4-204ENST00000455359 SDHAF1A6NFY7 115 aa9.8□□□□□ -0.84
HMGXB4-204ENST00000455359 SIVA1O15304 175 aa9.8□□□□□ -0.84
HMGXB4-204ENST00000455359 NCR2O95944 276 aa9.8□□□□□ -0.84
HMGXB4-204ENST00000455359 PKIAP61925 76 aa9.8□□□□□ -0.84
HMGXB4-204ENST00000455359 RPL32P62910 135 aaKnown RBP9.8□□□□□ -0.84
HMGXB4-204ENST00000455359 TRBV27A0A0K0K1C4 114 aa9.79□□□□□ -0.84
HMGXB4-204ENST00000455359 D6R8Y8 96 aa9.79□□□□□ -0.84
HMGXB4-204ENST00000455359 I3L3M4 83 aa9.79□□□□□ -0.84
HMGXB4-204ENST00000455359 VCYO14598 125 aa9.79□□□□□ -0.84
HMGXB4-204ENST00000455359 GAS8-AS1O95177 125 aa9.79□□□□□ -0.84
HMGXB4-204ENST00000455359 APCSP02743 223 aa9.79□□□□□ -0.84
HMGXB4-204ENST00000455359 DNAH10OSP0CZ25 163 aa9.79□□□□□ -0.84
HMGXB4-204ENST00000455359 BTF3P20290 206 aaKnown RBP9.79□□□□□ -0.84
HMGXB4-204ENST00000455359 RPS10P46783 165 aaKnown RBP9.79□□□□□ -0.84
HMGXB4-204ENST00000455359 POLR2KP53803 58 aaKnown RBP9.79□□□□□ -0.84
HMGXB4-204ENST00000455359 SUMO2P61956 95 aaKnown RBP9.79□□□□□ -0.84
HMGXB4-204ENST00000455359 COTL1Q14019 142 aa9.79□□□□□ -0.84
HMGXB4-204ENST00000455359 IQCJQ1A5X6 159 aa9.79□□□□□ -0.84
HMGXB4-204ENST00000455359 TTC32Q5I0X7 151 aa9.79□□□□□ -0.84
HMGXB4-204ENST00000455359 TMEM70Q9BUB7 260 aa9.79□□□□□ -0.84
HMGXB4-204ENST00000455359 TRBV25-1A0A075B6N4 114 aa9.78□□□□□ -0.84
HMGXB4-204ENST00000455359 TRAV9-2A0A087WT02 112 aa9.78□□□□□ -0.84
HMGXB4-204ENST00000455359 IGHV3-38A0A0C4DH36 116 aa9.78□□□□□ -0.84
HMGXB4-204ENST00000455359 SMKR1H3BMG3 65 aa9.78□□□□□ -0.84
HMGXB4-204ENST00000455359 TNFRSF6BO95407 300 aa9.78□□□□□ -0.84
HMGXB4-204ENST00000455359 LINC01556Q5JQF7 62 aa9.78□□□□□ -0.84
HMGXB4-204ENST00000455359 YPEL4Q96NS1 127 aa9.78□□□□□ -0.84
HMGXB4-204ENST00000455359 CHCHD7Q9BUK0 85 aa9.78□□□□□ -0.84
HMGXB4-204ENST00000455359 TGIF2-C20orf24A0A0A6YYL0 155 aa9.77□□□□□ -0.85
HMGXB4-204ENST00000455359 IGHV1-24A0A0C4DH33 117 aa9.77□□□□□ -0.85
HMGXB4-204ENST00000455359 NBDYA0A0U1RRE5 68 aa9.77□□□□□ -0.85
HMGXB4-204ENST00000455359 TCAPO15273 167 aa9.77□□□□□ -0.85
HMGXB4-204ENST00000455359 PMCHP20382 165 aa9.77□□□□□ -0.85
HMGXB4-204ENST00000455359 WFDC10BQ8IUB3 73 aa9.77□□□□□ -0.85
HMGXB4-204ENST00000455359 C10orf126Q8N4M7 172 aa9.77□□□□□ -0.85
HMGXB4-204ENST00000455359 PRELID3AQ96N28 172 aa9.77□□□□□ -0.85
HMGXB4-204ENST00000455359 PRSS47A8MTI9 375 aa9.76□□□□□ -0.85
HMGXB4-204ENST00000455359 S100A1P23297 94 aa9.76□□□□□ -0.85
HMGXB4-204ENST00000455359 KIR2DL4Q99706 377 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms