RNA–Protein interactions for RNA: ENST00000455111.1

GPC1-206, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-206ENST00000455111 DEFB104AQ8WTQ1 72 aa10.36□□□□□ -0.75
GPC1-206ENST00000455111 VAX2Q9UIW0 290 aa10.36□□□□□ -0.75
GPC1-206ENST00000455111 PRSS1P07477 247 aa10.35□□□□□ -0.75
GPC1-206ENST00000455111 GZMBP10144 247 aa10.35□□□□□ -0.75
GPC1-206ENST00000455111 SSTP61278 116 aa10.35□□□□□ -0.75
GPC1-206ENST00000455111 PRR34Q9NV39 138 aa10.35□□□□□ -0.75
GPC1-206ENST00000455111 USP17L23D6RBM5 183 aa10.34□□□□□ -0.75
GPC1-206ENST00000455111 TMEM262E9PQX1 116 aa10.34□□□□□ -0.75
GPC1-206ENST00000455111 Q0VG73 95 aa10.34□□□□□ -0.75
GPC1-206ENST00000455111 ELOBQ15370 118 aa10.34□□□□□ -0.75
GPC1-206ENST00000455111 RGS21Q2M5E4 152 aa10.34□□□□□ -0.75
GPC1-206ENST00000455111 ZNF471Q9BX82 626 aaPredicted RBP10.34□□□□□ -0.75
GPC1-206ENST00000455111 BCL2L11O43521 198 aa10.33□□□□□ -0.76
GPC1-206ENST00000455111 ANGP03950 147 aaKnown RBP10.33□□□□□ -0.76
GPC1-206ENST00000455111 IGLC6P0CF74 106 aa10.33□□□□□ -0.76
GPC1-206ENST00000455111 RBX1P62877 108 aa10.33□□□□□ -0.76
GPC1-206ENST00000455111 CLPSL2Q6UWE3 100 aa10.33□□□□□ -0.76
GPC1-206ENST00000455111 TMUB2Q71RG4 321 aa10.33□□□□□ -0.76
GPC1-206ENST00000455111 DAZAP1Q96EP5 407 aaKnown RBP10.33□□□□□ -0.76
GPC1-206ENST00000455111 C1orf43Q9BWL3 253 aa10.33□□□□□ -0.76
GPC1-206ENST00000455111 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.33□□□□□ -0.76
GPC1-206ENST00000455111 HMSDA8MTL9 139 aa10.32□□□□□ -0.76
GPC1-206ENST00000455111 S100A9P06702 114 aaKnown RBP10.32□□□□□ -0.76
GPC1-206ENST00000455111 RPL35P42766 123 aaKnown RBP10.32□□□□□ -0.76
GPC1-206ENST00000455111 GAGE6Q13070 117 aa10.32□□□□□ -0.76
GPC1-206ENST00000455111 C11orf52Q96A22 123 aa10.32□□□□□ -0.76
GPC1-206ENST00000455111 GFRA4Q9GZZ7 299 aa10.32□□□□□ -0.76
GPC1-206ENST00000455111 C19orf71A6NCJ1 209 aa10.31□□□□□ -0.76
GPC1-206ENST00000455111 UMAD1C9J7I0 102 aa10.31□□□□□ -0.76
GPC1-206ENST00000455111 M0QY20 66 aa10.31□□□□□ -0.76
GPC1-206ENST00000455111 HLA-DQA1P01909 254 aa10.31□□□□□ -0.76
GPC1-206ENST00000455111 SPANXN1Q5VSR9 72 aa10.31□□□□□ -0.76
GPC1-206ENST00000455111 CHCHD5Q9BSY4 110 aa10.31□□□□□ -0.76
GPC1-206ENST00000455111 H2AFB1P0C5Y9 115 aa10.3□□□□□ -0.76
GPC1-206ENST00000455111 LINC00269Q8N2A0 174 aa10.3□□□□□ -0.76
GPC1-206ENST00000455111 C20orf203Q8NBC4 194 aa10.3□□□□□ -0.76
GPC1-206ENST00000455111 TRBV20OR9-2A0A075B6H5 130 aa10.29□□□□□ -0.76
GPC1-206ENST00000455111 RAB19A4D1S5 217 aa10.29□□□□□ -0.76
GPC1-206ENST00000455111 F5H697 171 aa10.29□□□□□ -0.76
GPC1-206ENST00000455111 CRPP02741 224 aa10.29□□□□□ -0.76
GPC1-206ENST00000455111 SLPIP03973 132 aa10.29□□□□□ -0.76
GPC1-206ENST00000455111 MIAQ16674 131 aa10.29□□□□□ -0.76
GPC1-206ENST00000455111 IQCJQ1A5X6 159 aa10.29□□□□□ -0.76
GPC1-206ENST00000455111 SUMO4Q6EEV6 95 aa10.29□□□□□ -0.76
GPC1-206ENST00000455111 C9orf163Q8N9P6 203 aa10.29□□□□□ -0.76
GPC1-206ENST00000455111 PFDN1O60925 122 aa10.28□□□□□ -0.76
GPC1-206ENST00000455111 CENPWQ5EE01 88 aa10.28□□□□□ -0.76
GPC1-206ENST00000455111 KCNIP4Q6PIL6 250 aa10.28□□□□□ -0.76
GPC1-206ENST00000455111 IGLV4-60A0A075B6I1 120 aa10.27□□□□□ -0.77
GPC1-206ENST00000455111 A0A0D9SG52 128 aa10.27□□□□□ -0.77
GPC1-206ENST00000455111 C14orf177Q52M58 125 aa10.27□□□□□ -0.77
GPC1-206ENST00000455111 SDIM1Q6ZPB5 146 aa10.27□□□□□ -0.77
GPC1-206ENST00000455111 AP1S3Q96PC3 154 aa10.27□□□□□ -0.77
GPC1-206ENST00000455111 GNG13Q9P2W3 67 aa10.27□□□□□ -0.77
GPC1-206ENST00000455111 IGLV10-54A0A075B6I4 117 aa10.26□□□□□ -0.77
GPC1-206ENST00000455111 TRAV1-1A0A0B4J248 108 aa10.25□□□□□ -0.77
GPC1-206ENST00000455111 KANTRA0A1W2PQU2 76 aa10.25□□□□□ -0.77
GPC1-206ENST00000455111 OXTP01178 125 aa10.25□□□□□ -0.77
GPC1-206ENST00000455111 MGPP08493 103 aa10.25□□□□□ -0.77
GPC1-206ENST00000455111 DGAT2L7PQ6IED9 249 aa10.25□□□□□ -0.77
GPC1-206ENST00000455111 FER1L6-AS1Q8NA97 138 aa10.25□□□□□ -0.77
GPC1-206ENST00000455111 TRBV25-1A0A075B6N4 114 aa10.24□□□□□ -0.77
GPC1-206ENST00000455111 MT1HL1P0DM35 61 aa10.24□□□□□ -0.77
GPC1-206ENST00000455111 NKX2-5P52952 324 aaPredicted RBP10.24□□□□□ -0.77
GPC1-206ENST00000455111 RPL37AP61513 92 aaKnown RBP10.24□□□□□ -0.77
GPC1-206ENST00000455111 REG3AQ06141 175 aa10.24□□□□□ -0.77
GPC1-206ENST00000455111 CIRBPQ14011 172 aaKnown RBP10.24□□□□□ -0.77
GPC1-206ENST00000455111 OR2D3Q8NGH3 330 aa10.24□□□□□ -0.77
GPC1-206ENST00000455111 TPPP3Q9BW30 176 aa10.24□□□□□ -0.77
GPC1-206ENST00000455111 TNXBP22105 4242 aa10.24□□□□□ -0.77
GPC1-206ENST00000455111 IGHV1-24A0A0C4DH33 117 aa10.23□□□□□ -0.77
GPC1-206ENST00000455111 TMEM97Q5BJF2 176 aa10.23□□□□□ -0.77
GPC1-206ENST00000455111 LYZL1Q6UWQ5 148 aa10.23□□□□□ -0.77
GPC1-206ENST00000455111 MANBALQ9NQG1 85 aa10.23□□□□□ -0.77
GPC1-206ENST00000455111 SMIM17P0DL12 118 aa10.22□□□□□ -0.77
GPC1-206ENST00000455111 CHTF8P0CG12 524 aa10.21□□□□□ -0.77
GPC1-206ENST00000455111 PKIAP61925 76 aa10.21□□□□□ -0.77
GPC1-206ENST00000455111 CNBPP62633 177 aaKnown RBP10.21□□□□□ -0.77
GPC1-206ENST00000455111 A0A1B0GUV1 79 aa10.2□□□□□ -0.78
GPC1-206ENST00000455111 NTF3P20783 257 aa10.2□□□□□ -0.78
GPC1-206ENST00000455111 SULT1A2P50226 295 aa10.2□□□□□ -0.78
GPC1-206ENST00000455111 RAB5CP51148 216 aa10.2□□□□□ -0.78
GPC1-206ENST00000455111 CACNG7P62955 275 aa10.2□□□□□ -0.78
GPC1-206ENST00000455111 RASL11AQ6T310 242 aa10.2□□□□□ -0.78
GPC1-206ENST00000455111 K7EN84 100 aa10.19□□□□□ -0.78
GPC1-206ENST00000455111 CTRLP40313 264 aa10.19□□□□□ -0.78
GPC1-206ENST00000455111 FOXA3P55318 350 aaPredicted RBP10.19□□□□□ -0.78
GPC1-206ENST00000455111 RPS20P60866 119 aaKnown RBP10.19□□□□□ -0.78
GPC1-206ENST00000455111 MEF2BQ02080 365 aaPredicted RBP10.19□□□□□ -0.78
GPC1-206ENST00000455111 C15orf56Q8N910 161 aa10.19□□□□□ -0.78
GPC1-206ENST00000455111 NUDT10Q8NFP7 164 aa10.19□□□□□ -0.78
GPC1-206ENST00000455111 NUDT11Q96G61 164 aa10.19□□□□□ -0.78
GPC1-206ENST00000455111 PGLYRP4Q96LB8 373 aa10.19□□□□□ -0.78
GPC1-206ENST00000455111 TRAV26-2A0A0B4J265 109 aa10.18□□□□□ -0.78
GPC1-206ENST00000455111 GNG4P50150 75 aa10.18□□□□□ -0.78
GPC1-206ENST00000455111 SERTAD4-AS1Q5TG53 156 aa10.18□□□□□ -0.78
GPC1-206ENST00000455111 C9orf62Q8N4C0 152 aa10.18□□□□□ -0.78
GPC1-206ENST00000455111 GATD1Q8NB37 220 aa10.18□□□□□ -0.78
GPC1-206ENST00000455111 TMEM243Q9BU79 118 aa10.18□□□□□ -0.78
GPC1-206ENST00000455111 CNFNQ9BYD5 112 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms