RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 NEXN-AS1Q8NBZ9 246 aa9.59□□□□□ -0.87
GTF3C3-206ENST00000448539 NAT8BQ9UHF3 227 aa9.59□□□□□ -0.87
GTF3C3-206ENST00000448539 TNFRSF18Q9Y5U5 241 aa9.59□□□□□ -0.87
GTF3C3-206ENST00000448539 IGHV3-38A0A0C4DH36 116 aa9.58□□□□□ -0.88
GTF3C3-206ENST00000448539 PPP1R2P9O14990 202 aa9.58□□□□□ -0.88
GTF3C3-206ENST00000448539 UBE2D3P61077 147 aa9.58□□□□□ -0.88
GTF3C3-206ENST00000448539 UBE2D2P62837 147 aa9.58□□□□□ -0.88
GTF3C3-206ENST00000448539 RIGQ13278 110 aa9.58□□□□□ -0.88
GTF3C3-206ENST00000448539 LINC00336Q6ZUF6 198 aa9.58□□□□□ -0.88
GTF3C3-206ENST00000448539 COMMD7Q86VX2 200 aa9.58□□□□□ -0.88
GTF3C3-206ENST00000448539 C6orf223Q8N319 242 aa9.58□□□□□ -0.88
GTF3C3-206ENST00000448539 M0QY20 66 aa9.57□□□□□ -0.88
GTF3C3-206ENST00000448539 RASL11AQ6T310 242 aa9.57□□□□□ -0.88
GTF3C3-206ENST00000448539 NUP35Q8NFH5 326 aa9.57□□□□□ -0.88
GTF3C3-206ENST00000448539 DNAJC30Q96LL9 226 aa9.57□□□□□ -0.88
GTF3C3-206ENST00000448539 SMIM27A0A1W2PRY6 76 aa9.56□□□□□ -0.88
GTF3C3-206ENST00000448539 K7EP13 123 aa9.56□□□□□ -0.88
GTF3C3-206ENST00000448539 DNAH10OSP0CZ25 163 aa9.56□□□□□ -0.88
GTF3C3-206ENST00000448539 DAZ4Q86SG3 579 aaKnown RBP9.56□□□□□ -0.88
GTF3C3-206ENST00000448539 C10orf126Q8N4M7 172 aa9.56□□□□□ -0.88
GTF3C3-206ENST00000448539 DAZ3Q9NR90 486 aaKnown RBP9.56□□□□□ -0.88
GTF3C3-206ENST00000448539 HECTD4Q9Y4D8 3996 aa9.56□□□□□ -0.88
GTF3C3-206ENST00000448539 TMEM218A2RU14 115 aa9.55□□□□□ -0.88
GTF3C3-206ENST00000448539 F8W036 122 aa9.55□□□□□ -0.88
GTF3C3-206ENST00000448539 MT-ND4LP03901 98 aa9.55□□□□□ -0.88
GTF3C3-206ENST00000448539 BTF3P20290 206 aaKnown RBP9.55□□□□□ -0.88
GTF3C3-206ENST00000448539 LINC01556Q5JQF7 62 aa9.55□□□□□ -0.88
GTF3C3-206ENST00000448539 KRTAP1-5Q9BYS1 174 aa9.55□□□□□ -0.88
GTF3C3-206ENST00000448539 RTL8CO15255 209 aa9.54□□□□□ -0.88
GTF3C3-206ENST00000448539 TMEM97Q5BJF2 176 aa9.54□□□□□ -0.88
GTF3C3-206ENST00000448539 KCNIP4Q6PIL6 250 aa9.54□□□□□ -0.88
GTF3C3-206ENST00000448539 ANAPC16Q96DE5 110 aa9.54□□□□□ -0.88
GTF3C3-206ENST00000448539 NIT2Q9NQR4 276 aa9.54□□□□□ -0.88
GTF3C3-206ENST00000448539 URGCP-MRPS24S4R325 110 aa9.54□□□□□ -0.88
GTF3C3-206ENST00000448539 TRAV26-2A0A0B4J265 109 aa9.53□□□□□ -0.88
GTF3C3-206ENST00000448539 LINC00862A6NCI5 91 aa9.53□□□□□ -0.88
GTF3C3-206ENST00000448539 PRSS29PA6NIE9 313 aa9.53□□□□□ -0.88
GTF3C3-206ENST00000448539 IGHV3-30P01768 117 aa9.53□□□□□ -0.88
GTF3C3-206ENST00000448539 IGHV3-33P01772 117 aa9.53□□□□□ -0.88
GTF3C3-206ENST00000448539 IGHV3-30-3P0DP02 117 aa9.53□□□□□ -0.88
GTF3C3-206ENST00000448539 IGHV3-30-5P0DP03 117 aa9.53□□□□□ -0.88
GTF3C3-206ENST00000448539 FRZBQ92765 325 aa9.53□□□□□ -0.88
GTF3C3-206ENST00000448539 TMEM191AQ9H0A3 160 aa9.53□□□□□ -0.88
GTF3C3-206ENST00000448539 A0A1B0GW15 77 aa9.52□□□□□ -0.89
GTF3C3-206ENST00000448539 S100A8P05109 93 aa9.52□□□□□ -0.89
GTF3C3-206ENST00000448539 GATD1Q8NB37 220 aa9.52□□□□□ -0.89
GTF3C3-206ENST00000448539 TRBV6-8A0A0A6YYG3 113 aa9.51□□□□□ -0.89
GTF3C3-206ENST00000448539 CAMPP49913 170 aa9.51□□□□□ -0.89
GTF3C3-206ENST00000448539 NFE4Q86UQ8 179 aa9.51□□□□□ -0.89
GTF3C3-206ENST00000448539 SEC11CQ9BY50 192 aa9.51□□□□□ -0.89
GTF3C3-206ENST00000448539 DNAH2Q9P225 4427 aa9.51□□□□□ -0.89
GTF3C3-206ENST00000448539 TRBV25-1A0A075B6N4 114 aa9.5□□□□□ -0.89
GTF3C3-206ENST00000448539 A0A087WX48 190 aa9.5□□□□□ -0.89
GTF3C3-206ENST00000448539 TMEM262E9PQX1 116 aa9.5□□□□□ -0.89
GTF3C3-206ENST00000448539 ADCYAP1P18509 176 aa9.5□□□□□ -0.89
GTF3C3-206ENST00000448539 MRPL54Q6P161 138 aaKnown RBP9.5□□□□□ -0.89
GTF3C3-206ENST00000448539 AMN1Q8IY45 258 aa9.5□□□□□ -0.89
GTF3C3-206ENST00000448539 MRAP2Q96G30 205 aa9.5□□□□□ -0.89
GTF3C3-206ENST00000448539 CHCHD5Q9BSY4 110 aa9.5□□□□□ -0.89
GTF3C3-206ENST00000448539 HERC2O95714 4834 aa9.49□□□□□ -0.89
GTF3C3-206ENST00000448539 RAB4AP20338 218 aa9.49□□□□□ -0.89
GTF3C3-206ENST00000448539 PKIAP61925 76 aa9.49□□□□□ -0.89
GTF3C3-206ENST00000448539 HBBP68871 147 aa9.49□□□□□ -0.89
GTF3C3-206ENST00000448539 NIT1Q86X76 327 aa9.49□□□□□ -0.89
GTF3C3-206ENST00000448539 IGHV1-24A0A0C4DH33 117 aa9.48□□□□□ -0.89
GTF3C3-206ENST00000448539 IBA57-AS1B1ANH7 110 aa9.48□□□□□ -0.89
GTF3C3-206ENST00000448539 COTL1Q14019 142 aa9.48□□□□□ -0.89
GTF3C3-206ENST00000448539 ATP5L2Q7Z4Y8 100 aa9.48□□□□□ -0.89
GTF3C3-206ENST00000448539 RPL39LQ96EH5 51 aaKnown RBP9.48□□□□□ -0.89
GTF3C3-206ENST00000448539 RNF185Q96GF1 192 aa9.48□□□□□ -0.89
GTF3C3-206ENST00000448539 CHCHD7Q9BUK0 85 aa9.48□□□□□ -0.89
GTF3C3-206ENST00000448539 FAT2Q9NYQ8 4349 aa9.48□□□□□ -0.89
GTF3C3-206ENST00000448539 PPP1R17O96001 155 aa9.47□□□□□ -0.89
GTF3C3-206ENST00000448539 ELOBQ15370 118 aa9.47□□□□□ -0.89
GTF3C3-206ENST00000448539 NTM-AS1Q6ZSK4 140 aa9.47□□□□□ -0.89
GTF3C3-206ENST00000448539 ST20Q9HBF5 79 aa9.47□□□□□ -0.89
GTF3C3-206ENST00000448539 TNP2Q05952 138 aa9.46□□□□□ -0.9
GTF3C3-206ENST00000448539 LAGE3Q14657 143 aa9.46□□□□□ -0.9
GTF3C3-206ENST00000448539 IQCJQ1A5X6 159 aa9.46□□□□□ -0.9
GTF3C3-206ENST00000448539 FAM104BQ5XKR9 115 aa9.46□□□□□ -0.9
GTF3C3-206ENST00000448539 Q8N3U1 123 aa9.46□□□□□ -0.9
GTF3C3-206ENST00000448539 TMEM243Q9BU79 118 aa9.46□□□□□ -0.9
GTF3C3-206ENST00000448539 CTDSP1Q9GZU7 261 aa9.46□□□□□ -0.9
GTF3C3-206ENST00000448539 Q9HAA7 133 aa9.46□□□□□ -0.9
GTF3C3-206ENST00000448539 DNAH17Q9UFH2 4485 aa9.45□□□□□ -0.9
GTF3C3-206ENST00000448539 A0A1B0GXF2 115 aa9.45□□□□□ -0.9
GTF3C3-206ENST00000448539 SDHAF1A6NFY7 115 aa9.45□□□□□ -0.9
GTF3C3-206ENST00000448539 PSCAO43653 123 aa9.45□□□□□ -0.9
GTF3C3-206ENST00000448539 PMCHP20382 165 aa9.45□□□□□ -0.9
GTF3C3-206ENST00000448539 AMTP48728 403 aa9.45□□□□□ -0.9
GTF3C3-206ENST00000448539 GAGE6Q13070 117 aa9.45□□□□□ -0.9
GTF3C3-206ENST00000448539 DEFB104AQ8WTQ1 72 aa9.45□□□□□ -0.9
GTF3C3-206ENST00000448539 BTF3L4Q96K17 158 aa9.45□□□□□ -0.9
GTF3C3-206ENST00000448539 TRAV8-3A0A0A6YYJ7 113 aa9.44□□□□□ -0.9
GTF3C3-206ENST00000448539 TRBV6-5A0A0K0K1A5 114 aa9.44□□□□□ -0.9
GTF3C3-206ENST00000448539 SMKR1H3BMG3 65 aa9.44□□□□□ -0.9
GTF3C3-206ENST00000448539 I3L3M4 83 aa9.44□□□□□ -0.9
GTF3C3-206ENST00000448539 UBE2L6O14933 153 aa9.44□□□□□ -0.9
GTF3C3-206ENST00000448539 NCR2O95944 276 aa9.44□□□□□ -0.9
GTF3C3-206ENST00000448539 CKS2P33552 79 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 115.2 ms