RNA–Protein interactions for RNA: ENST00000448340.5

HLCS-205, Transcript of holocarboxylase synthetase, humanhuman

TSL 1 (best)

Gene HLCS, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-205ENST00000448340 TMEM242Q9NWH2 141 aa12.19□□□□□ -0.46
HLCS-205ENST00000448340 LINC00588Q9Y4M8 146 aa12.19□□□□□ -0.46
HLCS-205ENST00000448340 C7orf77A4D0Y5 90 aa12.18□□□□□ -0.46
HLCS-205ENST00000448340 M0QY20 66 aa12.18□□□□□ -0.46
HLCS-205ENST00000448340 APOC3P02656 99 aa12.18□□□□□ -0.46
HLCS-205ENST00000448340 RPL36AP83881 106 aaKnown RBP12.18□□□□□ -0.46
HLCS-205ENST00000448340 SUMO4Q6EEV6 95 aa12.18□□□□□ -0.46
HLCS-205ENST00000448340 RPL36ALQ969Q0 106 aaKnown RBP12.18□□□□□ -0.46
HLCS-205ENST00000448340 TRBV7-3A0A075B6L6 115 aa12.17□□□□□ -0.46
HLCS-205ENST00000448340 A0A087WWC5 75 aa12.17□□□□□ -0.46
HLCS-205ENST00000448340 S100A8P05109 93 aa12.17□□□□□ -0.46
HLCS-205ENST00000448340 TIRAPP58753 221 aa12.17□□□□□ -0.46
HLCS-205ENST00000448340 ATP5L2Q7Z4Y8 100 aa12.17□□□□□ -0.46
HLCS-205ENST00000448340 SVBPQ8N300 66 aa12.17□□□□□ -0.46
HLCS-205ENST00000448340 NEXN-AS1Q8NBZ9 246 aa12.17□□□□□ -0.46
HLCS-205ENST00000448340 ATP6V0E2Q8NHE4 81 aa12.17□□□□□ -0.46
HLCS-205ENST00000448340 ZNRF2Q8NHG8 242 aa12.17□□□□□ -0.46
HLCS-205ENST00000448340 FAT2Q9NYQ8 4349 aa12.17□□□□□ -0.46
HLCS-205ENST00000448340 A0A1B0GXF2 115 aa12.16□□□□□ -0.46
HLCS-205ENST00000448340 SNAPINO95295 136 aa12.16□□□□□ -0.46
HLCS-205ENST00000448340 CAMPP49913 170 aa12.16□□□□□ -0.46
HLCS-205ENST00000448340 MRPL54Q6P161 138 aaKnown RBP12.16□□□□□ -0.46
HLCS-205ENST00000448340 RASL11AQ6T310 242 aa12.16□□□□□ -0.46
HLCS-205ENST00000448340 FRZBQ92765 325 aa12.16□□□□□ -0.46
HLCS-205ENST00000448340 MRPS16Q9Y3D3 137 aaKnown RBP12.16□□□□□ -0.46
HLCS-205ENST00000448340 UBE2D3P61077 147 aa12.15□□□□□ -0.46
HLCS-205ENST00000448340 UBE2D2P62837 147 aa12.15□□□□□ -0.46
HLCS-205ENST00000448340 HBBP68871 147 aa12.15□□□□□ -0.46
HLCS-205ENST00000448340 KCNIP4Q6PIL6 250 aa12.15□□□□□ -0.46
HLCS-205ENST00000448340 BTF3L4Q96K17 158 aa12.15□□□□□ -0.46
HLCS-205ENST00000448340 DNAJC30Q96LL9 226 aa12.15□□□□□ -0.46
HLCS-205ENST00000448340 UPK3BQ9BT76 320 aa12.15□□□□□ -0.46
HLCS-205ENST00000448340 GTSF1LQ9H1H1 148 aa12.15□□□□□ -0.46
HLCS-205ENST00000448340 RPS10P5Q9NQ39 176 aa12.15□□□□□ -0.46
HLCS-205ENST00000448340 DNAH2Q9P225 4427 aa12.14□□□□□ -0.47
HLCS-205ENST00000448340 RAB4AP20338 218 aa12.14□□□□□ -0.47
HLCS-205ENST00000448340 GATD1Q8NB37 220 aa12.14□□□□□ -0.47
HLCS-205ENST00000448340 RNF185Q96GF1 192 aa12.14□□□□□ -0.47
HLCS-205ENST00000448340 NIT2Q9NQR4 276 aa12.14□□□□□ -0.47
HLCS-205ENST00000448340 PKHD1P08F94 4074 aa12.14□□□□□ -0.47
HLCS-205ENST00000448340 AMN1Q8IY45 258 aa12.13□□□□□ -0.47
HLCS-205ENST00000448340 TNFRSF18Q9Y5U5 241 aa12.13□□□□□ -0.47
HLCS-205ENST00000448340 TRAV9-1A0A075B6T8 112 aa12.12□□□□□ -0.47
HLCS-205ENST00000448340 TRAV26-2A0A0B4J265 109 aa12.12□□□□□ -0.47
HLCS-205ENST00000448340 S100PP25815 95 aa12.12□□□□□ -0.47
HLCS-205ENST00000448340 FAM104BQ5XKR9 115 aa12.12□□□□□ -0.47
HLCS-205ENST00000448340 MRAP2Q96G30 205 aa12.12□□□□□ -0.47
HLCS-205ENST00000448340 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.11□□□□□ -0.47
HLCS-205ENST00000448340 Q9H8V8 135 aa12.11□□□□□ -0.47
HLCS-205ENST00000448340 LELP1Q5T871 98 aa12.1□□□□□ -0.47
HLCS-205ENST00000448340 DAZ4Q86SG3 579 aaKnown RBP12.1□□□□□ -0.47
HLCS-205ENST00000448340 DAZ3Q9NR90 486 aaKnown RBP12.1□□□□□ -0.47
HLCS-205ENST00000448340 DNAH17Q9UFH2 4485 aa12.08□□□□□ -0.48
HLCS-205ENST00000448340 TRAV8-6A0A0B4J262 113 aa12.08□□□□□ -0.48
HLCS-205ENST00000448340 MRPL51Q4U2R6 128 aaKnown RBP12.08□□□□□ -0.48
HLCS-205ENST00000448340 RPL39LQ96EH5 51 aaKnown RBP12.08□□□□□ -0.48
HLCS-205ENST00000448340 URGCP-MRPS24S4R325 110 aa12.08□□□□□ -0.48
HLCS-205ENST00000448340 DYNC1H1Q14204 4646 aaKnown RBP12.07□□□□□ -0.48
HLCS-205ENST00000448340 DNAH11Q96DT5 4516 aa12.07□□□□□ -0.48
HLCS-205ENST00000448340 IGHV3-38A0A0C4DH36 116 aa12.07□□□□□ -0.48
HLCS-205ENST00000448340 TRBV6-5A0A0K0K1A5 114 aa12.07□□□□□ -0.48
HLCS-205ENST00000448340 SIVA1O15304 175 aa12.07□□□□□ -0.48
HLCS-205ENST00000448340 PPP1R17O96001 155 aa12.07□□□□□ -0.48
HLCS-205ENST00000448340 TMEM97Q5BJF2 176 aa12.07□□□□□ -0.48
HLCS-205ENST00000448340 OR10J3Q5JRS4 329 aa12.07□□□□□ -0.48
HLCS-205ENST00000448340 ABCA13Q86UQ4 5058 aa12.06□□□□□ -0.48
HLCS-205ENST00000448340 IGLV2-18A0A075B6J9 118 aa12.06□□□□□ -0.48
HLCS-205ENST00000448340 GAS8-AS1O95177 125 aa12.06□□□□□ -0.48
HLCS-205ENST00000448340 A0A1B0GVY2 172 aa12.05□□□□□ -0.48
HLCS-205ENST00000448340 CKS2P33552 79 aa12.05□□□□□ -0.48
HLCS-205ENST00000448340 RPS10P46783 165 aaKnown RBP12.05□□□□□ -0.48
HLCS-205ENST00000448340 WFDC10BQ8IUB3 73 aa12.05□□□□□ -0.48
HLCS-205ENST00000448340 TRBV6-8A0A0A6YYG3 113 aa12.04□□□□□ -0.48
HLCS-205ENST00000448340 SMKR1H3BMG3 65 aa12.04□□□□□ -0.48
HLCS-205ENST00000448340 NCR2O95944 276 aa12.04□□□□□ -0.48
HLCS-205ENST00000448340 PPBPP02775 128 aa12.04□□□□□ -0.48
HLCS-205ENST00000448340 ATRAIDQ6UW56 229 aa12.04□□□□□ -0.48
HLCS-205ENST00000448340 ST20Q9HBF5 79 aa12.04□□□□□ -0.48
HLCS-205ENST00000448340 NBDYA0A0U1RRE5 68 aa12.03□□□□□ -0.48
HLCS-205ENST00000448340 SDHAF1A6NFY7 115 aa12.03□□□□□ -0.48
HLCS-205ENST00000448340 DNAH10OSP0CZ25 163 aa12.03□□□□□ -0.48
HLCS-205ENST00000448340 COX19Q49B96 90 aa12.03□□□□□ -0.48
HLCS-205ENST00000448340 NRACQ8N912 160 aa12.03□□□□□ -0.48
HLCS-205ENST00000448340 TRBV24-1A0A075B6N3 115 aa12.02□□□□□ -0.49
HLCS-205ENST00000448340 D6R8Y8 96 aa12.02□□□□□ -0.49
HLCS-205ENST00000448340 K7EP13 123 aa12.02□□□□□ -0.49
HLCS-205ENST00000448340 M0R2N4 97 aa12.02□□□□□ -0.49
HLCS-205ENST00000448340 TTC32Q5I0X7 151 aa12.02□□□□□ -0.49
HLCS-205ENST00000448340 Q6ZR54 194 aa12.02□□□□□ -0.49
HLCS-205ENST00000448340 TMEM136Q6ZRR5 245 aa12.02□□□□□ -0.49
HLCS-205ENST00000448340 NTM-AS1Q6ZSK4 140 aa12.02□□□□□ -0.49
HLCS-205ENST00000448340 POLR2KP53803 58 aaKnown RBP12.01□□□□□ -0.49
HLCS-205ENST00000448340 COTL1Q14019 142 aa12.01□□□□□ -0.49
HLCS-205ENST00000448340 ELOBQ15370 118 aa12.01□□□□□ -0.49
HLCS-205ENST00000448340 LINC01556Q5JQF7 62 aa12.01□□□□□ -0.49
HLCS-205ENST00000448340 ORMDL3Q8N138 153 aa12.01□□□□□ -0.49
HLCS-205ENST00000448340 TMEM70Q9BUB7 260 aa12.01□□□□□ -0.49
HLCS-205ENST00000448340 GNB1LQ9BYB4 327 aa12.01□□□□□ -0.49
HLCS-205ENST00000448340 TRBV25-1A0A075B6N4 114 aa12□□□□□ -0.49
HLCS-205ENST00000448340 TRAV9-2A0A087WT02 112 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms