RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 SPART-AS1P0CW21 52 aa5.96□□□□□ -1.46
NEDD9-204ENST00000448183 IGKV1D-37A0A075B6S9 117 aa5.96□□□□□ -1.46
NEDD9-204ENST00000448183 KIAA1671Q9BY89 1806 aa5.96□□□□□ -1.46
NEDD9-204ENST00000448183 NDUFA1O15239 70 aa5.96□□□□□ -1.46
NEDD9-204ENST00000448183 DENND4CQ5VZ89 1909 aa5.96□□□□□ -1.46
NEDD9-204ENST00000448183 FANCD2OSQ96PS1 177 aa5.95□□□□□ -1.46
NEDD9-204ENST00000448183 PKIGQ9Y2B9 76 aa5.95□□□□□ -1.46
NEDD9-204ENST00000448183 IGHV4OR15-8A0A075B7B6 117 aa5.95□□□□□ -1.46
NEDD9-204ENST00000448183 A0A087WW49 117 aa5.95□□□□□ -1.46
NEDD9-204ENST00000448183 TCL1BO95988 128 aa5.95□□□□□ -1.46
NEDD9-204ENST00000448183 TMEM256-PLSCR3K7ERE1 68 aa5.95□□□□□ -1.46
NEDD9-204ENST00000448183 DEFB1P60022 68 aa5.95□□□□□ -1.46
NEDD9-204ENST00000448183 Q6ZUT4 128 aa5.95□□□□□ -1.46
NEDD9-204ENST00000448183 Q8N7P7 452 aa5.95□□□□□ -1.46
NEDD9-204ENST00000448183 IGHV4-30-2A0A087WSY4 118 aa5.95□□□□□ -1.46
NEDD9-204ENST00000448183 PDE6GP18545 87 aa5.95□□□□□ -1.46
NEDD9-204ENST00000448183 LINC00322Q6ZN03 302 aaPredicted RBP5.95□□□□□ -1.46
NEDD9-204ENST00000448183 MUC6Q6W4X9 2439 aa5.94□□□□□ -1.46
NEDD9-204ENST00000448183 MIAQ16674 131 aa5.94□□□□□ -1.46
NEDD9-204ENST00000448183 DIRC1Q969H9 104 aa5.94□□□□□ -1.46
NEDD9-204ENST00000448183 SPAG11BQ08648 103 aa5.94□□□□□ -1.46
NEDD9-204ENST00000448183 HIGD2BQ4VC39 106 aa5.94□□□□□ -1.46
NEDD9-204ENST00000448183 C9orf66Q5T8R8 295 aa5.94□□□□□ -1.46
NEDD9-204ENST00000448183 GDF5OSQ5U4N7 250 aa5.94□□□□□ -1.46
NEDD9-204ENST00000448183 MLST8Q9BVC4 326 aa5.94□□□□□ -1.46
NEDD9-204ENST00000448183 MDFICQ9P1T7 246 aa5.94□□□□□ -1.46
NEDD9-204ENST00000448183 A0A0J9YX75 114 aa5.94□□□□□ -1.46
NEDD9-204ENST00000448183 TMEM89A2RUT3 159 aa5.94□□□□□ -1.46
NEDD9-204ENST00000448183 NCR3O14931 201 aa5.94□□□□□ -1.46
NEDD9-204ENST00000448183 IGHV3-30P01768 117 aa5.94□□□□□ -1.46
NEDD9-204ENST00000448183 IGHV3-33P01772 117 aa5.94□□□□□ -1.46
NEDD9-204ENST00000448183 IGHV3-30-5P0DP03 117 aa5.94□□□□□ -1.46
NEDD9-204ENST00000448183 HHLA3Q9XRX5 114 aa5.94□□□□□ -1.46
NEDD9-204ENST00000448183 TRBV10-1A0A0K0K1A3 114 aa5.94□□□□□ -1.46
NEDD9-204ENST00000448183 PROP1O75360 226 aa5.94□□□□□ -1.46
NEDD9-204ENST00000448183 ZNF80P51504 273 aaPredicted RBP5.94□□□□□ -1.46
NEDD9-204ENST00000448183 TIRAPP58753 221 aa5.94□□□□□ -1.46
NEDD9-204ENST00000448183 ZMAT4Q9H898 229 aa5.94□□□□□ -1.46
NEDD9-204ENST00000448183 PRB2P02812 416 aaPredicted RBP5.93□□□□□ -1.46
NEDD9-204ENST00000448183 C10orf105Q8TEF2 133 aa5.93□□□□□ -1.46
NEDD9-204ENST00000448183 MBD6Q96DN6 1003 aa5.93□□□□□ -1.46
NEDD9-204ENST00000448183 TM2D2Q9BX73 214 aa5.93□□□□□ -1.46
NEDD9-204ENST00000448183 IGLC6P0CF74 106 aa5.93□□□□□ -1.46
NEDD9-204ENST00000448183 RNF183Q96D59 192 aa5.93□□□□□ -1.46
NEDD9-204ENST00000448183 UNQ9165/PRO28630Q6UXU0 137 aa5.93□□□□□ -1.46
NEDD9-204ENST00000448183 HIVEP2P31629 2446 aa5.93□□□□□ -1.46
NEDD9-204ENST00000448183 A0A0J9YXY3 114 aa5.93□□□□□ -1.46
NEDD9-204ENST00000448183 CHKB-CPT1BH3BT56 60 aa5.93□□□□□ -1.46
NEDD9-204ENST00000448183 MSMPQ1L6U9 139 aa5.93□□□□□ -1.46
NEDD9-204ENST00000448183 SEM1Q6ZVN7 128 aa5.93□□□□□ -1.46
NEDD9-204ENST00000448183 NFE4Q86UQ8 179 aa5.93□□□□□ -1.46
NEDD9-204ENST00000448183 ZNF295-AS1Q8N0V1 137 aa5.93□□□□□ -1.46
NEDD9-204ENST00000448183 CCL18P55774 89 aa5.92□□□□□ -1.46
NEDD9-204ENST00000448183 BRWD1-AS2P59051 145 aa5.92□□□□□ -1.46
NEDD9-204ENST00000448183 C14orf132Q9NPU4 83 aa5.92□□□□□ -1.46
NEDD9-204ENST00000448183 ESM1Q9NQ30 184 aa5.92□□□□□ -1.46
NEDD9-204ENST00000448183 ZFP36P26651 326 aaKnown RBP5.92□□□□□ -1.46
NEDD9-204ENST00000448183 NDUFV3P56181 108 aaKnown RBP5.92□□□□□ -1.46
NEDD9-204ENST00000448183 HIST2H2BDQ6DRA6 164 aa5.92□□□□□ -1.46
NEDD9-204ENST00000448183 IGF2-ASQ6U949 168 aa5.92□□□□□ -1.46
NEDD9-204ENST00000448183 CUL9Q8IWT3 2517 aa5.92□□□□□ -1.46
NEDD9-204ENST00000448183 MT-ATP8P03928 68 aa5.92□□□□□ -1.46
NEDD9-204ENST00000448183 DENND4AQ7Z401 1863 aa5.92□□□□□ -1.46
NEDD9-204ENST00000448183 CLPSL1A2RUU4 121 aa5.92□□□□□ -1.46
NEDD9-204ENST00000448183 SPANXB1Q9NS25 103 aaPredicted RBP5.92□□□□□ -1.46
NEDD9-204ENST00000448183 NUP210Q8TEM1 1887 aaPredicted RBP5.91□□□□□ -1.46
NEDD9-204ENST00000448183 OBSL1O75147 1896 aa5.91□□□□□ -1.46
NEDD9-204ENST00000448183 CEMP1Q6PRD7 247 aaPredicted RBP5.91□□□□□ -1.46
NEDD9-204ENST00000448183 Q6ZPA2 131 aa5.91□□□□□ -1.46
NEDD9-204ENST00000448183 LINC00574Q9H8X3 128 aa5.91□□□□□ -1.46
NEDD9-204ENST00000448183 IGKV2D-26A0A0A0MRZ7 120 aa5.91□□□□□ -1.46
NEDD9-204ENST00000448183 J3QKU1 62 aa5.91□□□□□ -1.46
NEDD9-204ENST00000448183 TRBV12-3P01733 135 aa5.91□□□□□ -1.46
NEDD9-204ENST00000448183 SIRPDQ9H106 197 aa5.91□□□□□ -1.46
NEDD9-204ENST00000448183 PLA2G5P39877 138 aa5.91□□□□□ -1.46
NEDD9-204ENST00000448183 DEFB113Q30KQ7 82 aa5.91□□□□□ -1.46
NEDD9-204ENST00000448183 TMEM263Q8WUH6 116 aaKnown RBP5.91□□□□□ -1.46
NEDD9-204ENST00000448183 PLXNB3Q9ULL4 1909 aa5.91□□□□□ -1.46
NEDD9-204ENST00000448183 UQCRQO14949 82 aa5.91□□□□□ -1.46
NEDD9-204ENST00000448183 NEXN-AS1Q8NBZ9 246 aa5.91□□□□□ -1.46
NEDD9-204ENST00000448183 KLK12Q9UKR0 248 aa5.91□□□□□ -1.46
NEDD9-204ENST00000448183 TEX49A0A1B0GTD5 131 aa5.9□□□□□ -1.46
NEDD9-204ENST00000448183 YPEL4Q96NS1 127 aa5.9□□□□□ -1.46
NEDD9-204ENST00000448183 PRO0255Q9UI72 69 aa5.9□□□□□ -1.46
NEDD9-204ENST00000448183 TRAV23DV6A0A075B6W5 121 aa5.9□□□□□ -1.47
NEDD9-204ENST00000448183 DOPEY1Q5JWR5 2465 aa5.9□□□□□ -1.47
NEDD9-204ENST00000448183 COX7BP24311 80 aa5.89□□□□□ -1.47
NEDD9-204ENST00000448183 CCDC140Q96MF4 163 aa5.89□□□□□ -1.47
NEDD9-204ENST00000448183 TP73-AS1Q9UF72 201 aa5.89□□□□□ -1.47
NEDD9-204ENST00000448183 TP53TG3Q9ULZ0 132 aa5.89□□□□□ -1.47
NEDD9-204ENST00000448183 SPRY4Q9C004 299 aa5.89□□□□□ -1.47
NEDD9-204ENST00000448183 ADORA2A-AS1P86434 159 aa5.89□□□□□ -1.47
NEDD9-204ENST00000448183 C20orf197Q8N268 126 aa5.89□□□□□ -1.47
NEDD9-204ENST00000448183 MYCNOSP40205 109 aa5.89□□□□□ -1.47
NEDD9-204ENST00000448183 ODF3Q96PU9 254 aa5.89□□□□□ -1.47
NEDD9-204ENST00000448183 UPK3BQ9BT76 320 aa5.89□□□□□ -1.47
NEDD9-204ENST00000448183 MED12LQ86YW9 2145 aa5.89□□□□□ -1.47
NEDD9-204ENST00000448183 UBE2AP49459 152 aa5.88□□□□□ -1.47
NEDD9-204ENST00000448183 DAZAP2Q15038 168 aaPredicted RBP5.88□□□□□ -1.47
NEDD9-204ENST00000448183 SPATA25Q9BR10 227 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms