RNA–Protein interactions for RNA: ENST00000443563.5

HDAC6-211, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-211ENST00000443563 LINC00315P59091 139 aa7.41□□□□□ -1.22
HDAC6-211ENST00000443563 TMEM97Q5BJF2 176 aa7.41□□□□□ -1.22
HDAC6-211ENST00000443563 WFDC10BQ8IUB3 73 aa7.41□□□□□ -1.22
HDAC6-211ENST00000443563 C6orf223Q8N319 242 aa7.41□□□□□ -1.22
HDAC6-211ENST00000443563 NEXN-AS1Q8NBZ9 246 aa7.41□□□□□ -1.22
HDAC6-211ENST00000443563 NAT8BQ9UHF3 227 aa7.41□□□□□ -1.22
HDAC6-211ENST00000443563 HECTD4Q9Y4D8 3996 aa7.4□□□□□ -1.22
HDAC6-211ENST00000443563 PKD1P98161 4303 aa7.4□□□□□ -1.22
HDAC6-211ENST00000443563 IGHV3-38A0A0C4DH36 116 aa7.4□□□□□ -1.22
HDAC6-211ENST00000443563 UBE2D3P61077 147 aa7.4□□□□□ -1.22
HDAC6-211ENST00000443563 UBE2D2P62837 147 aa7.4□□□□□ -1.22
HDAC6-211ENST00000443563 RIGQ13278 110 aa7.4□□□□□ -1.22
HDAC6-211ENST00000443563 RASL11AQ6T310 242 aa7.4□□□□□ -1.22
HDAC6-211ENST00000443563 DAZ4Q86SG3 579 aaKnown RBP7.4□□□□□ -1.22
HDAC6-211ENST00000443563 C10orf126Q8N4M7 172 aa7.4□□□□□ -1.22
HDAC6-211ENST00000443563 FRZBQ92765 325 aa7.4□□□□□ -1.22
HDAC6-211ENST00000443563 DAZ3Q9NR90 486 aaKnown RBP7.4□□□□□ -1.22
HDAC6-211ENST00000443563 Q9UF83 564 aa7.4□□□□□ -1.22
HDAC6-211ENST00000443563 TNFRSF18Q9Y5U5 241 aa7.4□□□□□ -1.22
HDAC6-211ENST00000443563 M0QY20 66 aa7.39□□□□□ -1.23
HDAC6-211ENST00000443563 LINC01556Q5JQF7 62 aa7.39□□□□□ -1.23
HDAC6-211ENST00000443563 SUMO4Q6EEV6 95 aa7.39□□□□□ -1.23
HDAC6-211ENST00000443563 NUP35Q8NFH5 326 aa7.39□□□□□ -1.23
HDAC6-211ENST00000443563 A0A1B0GW15 77 aa7.38□□□□□ -1.23
HDAC6-211ENST00000443563 SMIM27A0A1W2PRY6 76 aa7.38□□□□□ -1.23
HDAC6-211ENST00000443563 MT-ND4LP03901 98 aa7.38□□□□□ -1.23
HDAC6-211ENST00000443563 KCNIP4Q6PIL6 250 aa7.38□□□□□ -1.23
HDAC6-211ENST00000443563 NFE4Q86UQ8 179 aa7.38□□□□□ -1.23
HDAC6-211ENST00000443563 TMEM191AQ9H0A3 160 aa7.38□□□□□ -1.23
HDAC6-211ENST00000443563 NIT2Q9NQR4 276 aa7.38□□□□□ -1.23
HDAC6-211ENST00000443563 TMEM218A2RU14 115 aa7.37□□□□□ -1.23
HDAC6-211ENST00000443563 PRSS29PA6NIE9 313 aa7.37□□□□□ -1.23
HDAC6-211ENST00000443563 F8W036 122 aa7.37□□□□□ -1.23
HDAC6-211ENST00000443563 RTL8CO15255 209 aa7.37□□□□□ -1.23
HDAC6-211ENST00000443563 PKIAP61925 76 aa7.37□□□□□ -1.23
HDAC6-211ENST00000443563 COMMD7Q86VX2 200 aa7.37□□□□□ -1.23
HDAC6-211ENST00000443563 ANAPC16Q96DE5 110 aa7.37□□□□□ -1.23
HDAC6-211ENST00000443563 KRTAP1-5Q9BYS1 174 aa7.37□□□□□ -1.23
HDAC6-211ENST00000443563 URGCP-MRPS24S4R325 110 aa7.37□□□□□ -1.23
HDAC6-211ENST00000443563 EPPK1P58107 5090 aaKnown RBP7.37□□□□□ -1.23
HDAC6-211ENST00000443563 TRBV6-8A0A0A6YYG3 113 aa7.36□□□□□ -1.23
HDAC6-211ENST00000443563 LINC00862A6NCI5 91 aa7.36□□□□□ -1.23
HDAC6-211ENST00000443563 S100A8P05109 93 aa7.36□□□□□ -1.23
HDAC6-211ENST00000443563 CHCHD7Q9BUK0 85 aa7.36□□□□□ -1.23
HDAC6-211ENST00000443563 A0A087WX48 190 aa7.35□□□□□ -1.23
HDAC6-211ENST00000443563 ELOBQ15370 118 aa7.35□□□□□ -1.23
HDAC6-211ENST00000443563 GATD1Q8NB37 220 aa7.35□□□□□ -1.23
HDAC6-211ENST00000443563 SEC11CQ9BY50 192 aa7.35□□□□□ -1.23
HDAC6-211ENST00000443563 TRBV25-1A0A075B6N4 114 aa7.34□□□□□ -1.23
HDAC6-211ENST00000443563 IBA57-AS1B1ANH7 110 aa7.34□□□□□ -1.23
HDAC6-211ENST00000443563 PPP1R17O96001 155 aa7.34□□□□□ -1.23
HDAC6-211ENST00000443563 IGHV3-30P01768 117 aa7.34□□□□□ -1.23
HDAC6-211ENST00000443563 IGHV3-33P01772 117 aa7.34□□□□□ -1.23
HDAC6-211ENST00000443563 IGHV3-30-3P0DP02 117 aa7.34□□□□□ -1.23
HDAC6-211ENST00000443563 IGHV3-30-5P0DP03 117 aa7.34□□□□□ -1.23
HDAC6-211ENST00000443563 LAGE3Q14657 143 aa7.34□□□□□ -1.23
HDAC6-211ENST00000443563 ATP5L2Q7Z4Y8 100 aa7.34□□□□□ -1.23
HDAC6-211ENST00000443563 NIT1Q86X76 327 aa7.34□□□□□ -1.23
HDAC6-211ENST00000443563 MRAP2Q96G30 205 aa7.34□□□□□ -1.23
HDAC6-211ENST00000443563 DNAH11Q96DT5 4516 aa7.34□□□□□ -1.23
HDAC6-211ENST00000443563 TRAV26-2A0A0B4J265 109 aa7.33□□□□□ -1.24
HDAC6-211ENST00000443563 IGHV1-24A0A0C4DH33 117 aa7.33□□□□□ -1.24
HDAC6-211ENST00000443563 TMEM262E9PQX1 116 aa7.33□□□□□ -1.24
HDAC6-211ENST00000443563 RAB4AP20338 218 aa7.33□□□□□ -1.24
HDAC6-211ENST00000443563 HBBP68871 147 aa7.33□□□□□ -1.24
HDAC6-211ENST00000443563 CHCHD5Q9BSY4 110 aa7.33□□□□□ -1.24
HDAC6-211ENST00000443563 CTDSP1Q9GZU7 261 aa7.33□□□□□ -1.24
HDAC6-211ENST00000443563 TRAV8-3A0A0A6YYJ7 113 aa7.32□□□□□ -1.24
HDAC6-211ENST00000443563 TRBV6-5A0A0K0K1A5 114 aa7.32□□□□□ -1.24
HDAC6-211ENST00000443563 ADCYAP1P18509 176 aa7.32□□□□□ -1.24
HDAC6-211ENST00000443563 CAMPP49913 170 aa7.32□□□□□ -1.24
HDAC6-211ENST00000443563 COTL1Q14019 142 aa7.32□□□□□ -1.24
HDAC6-211ENST00000443563 IQCJQ1A5X6 159 aa7.32□□□□□ -1.24
HDAC6-211ENST00000443563 AMN1Q8IY45 258 aa7.32□□□□□ -1.24
HDAC6-211ENST00000443563 EREGO14944 169 aa7.31□□□□□ -1.24
HDAC6-211ENST00000443563 NCR2O95944 276 aa7.31□□□□□ -1.24
HDAC6-211ENST00000443563 FAM104BQ5XKR9 115 aa7.31□□□□□ -1.24
HDAC6-211ENST00000443563 MRPL54Q6P161 138 aaKnown RBP7.31□□□□□ -1.24
HDAC6-211ENST00000443563 NTM-AS1Q6ZSK4 140 aa7.31□□□□□ -1.24
HDAC6-211ENST00000443563 RPL39LQ96EH5 51 aaKnown RBP7.31□□□□□ -1.24
HDAC6-211ENST00000443563 RNF185Q96GF1 192 aa7.31□□□□□ -1.24
HDAC6-211ENST00000443563 IMMP2LQ96T52 175 aa7.31□□□□□ -1.24
HDAC6-211ENST00000443563 ST20Q9HBF5 79 aa7.31□□□□□ -1.24
HDAC6-211ENST00000443563 PKHD1P08F94 4074 aa7.3□□□□□ -1.24
HDAC6-211ENST00000443563 A0A1B0GXF2 115 aa7.3□□□□□ -1.24
HDAC6-211ENST00000443563 SDHAF1A6NFY7 115 aa7.3□□□□□ -1.24
HDAC6-211ENST00000443563 UBE2L6O14933 153 aa7.3□□□□□ -1.24
HDAC6-211ENST00000443563 PSCAO43653 123 aa7.3□□□□□ -1.24
HDAC6-211ENST00000443563 PMCHP20382 165 aa7.3□□□□□ -1.24
HDAC6-211ENST00000443563 TNP2Q05952 138 aa7.3□□□□□ -1.24
HDAC6-211ENST00000443563 Q6ZRN7 208 aaPredicted RBP7.3□□□□□ -1.24
HDAC6-211ENST00000443563 RMI2Q96E14 147 aa7.3□□□□□ -1.24
HDAC6-211ENST00000443563 BTF3L4Q96K17 158 aa7.3□□□□□ -1.24
HDAC6-211ENST00000443563 TMEM243Q9BU79 118 aa7.3□□□□□ -1.24
HDAC6-211ENST00000443563 TM2D2Q9BX73 214 aa7.3□□□□□ -1.24
HDAC6-211ENST00000443563 COX11Q9Y6N1 276 aa7.3□□□□□ -1.24
HDAC6-211ENST00000443563 A0A1B0GVY2 172 aa7.29□□□□□ -1.24
HDAC6-211ENST00000443563 I3L3M4 83 aa7.29□□□□□ -1.24
HDAC6-211ENST00000443563 CKS2P33552 79 aa7.29□□□□□ -1.24
HDAC6-211ENST00000443563 AMTP48728 403 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms