RNA–Protein interactions for RNA: ENST00000442975.6

CDKN3-204, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best) BASIC

Gene CDKN3, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-204ENST00000442975 TM2D2Q9BX73 214 aa14.07□□□□□ -0.16
CDKN3-204ENST00000442975 RNASE7Q9H1E1 156 aaKnown RBP14.07□□□□□ -0.16
CDKN3-204ENST00000442975 RPP21Q9H633 154 aaKnown RBP14.07□□□□□ -0.16
CDKN3-204ENST00000442975 KIF25-AS1Q9Y6Z4 181 aa14.07□□□□□ -0.16
CDKN3-204ENST00000442975 TRAV8-3A0A0A6YYJ7 113 aa14.06□□□□□ -0.16
CDKN3-204ENST00000442975 LRCOL1A6NCL2 159 aa14.06□□□□□ -0.16
CDKN3-204ENST00000442975 LYZL1Q6UWQ5 148 aa14.06□□□□□ -0.16
CDKN3-204ENST00000442975 KRTAP17-1Q9BYP8 105 aa14.06□□□□□ -0.16
CDKN3-204ENST00000442975 TRBV6-8A0A0A6YYG3 113 aa14.05□□□□□ -0.16
CDKN3-204ENST00000442975 TMEM262E9PQX1 116 aa14.05□□□□□ -0.16
CDKN3-204ENST00000442975 F2Z2F3 143 aa14.05□□□□□ -0.16
CDKN3-204ENST00000442975 TMEM250H0YL14 139 aa14.05□□□□□ -0.16
CDKN3-204ENST00000442975 OCC1Q8TAD7 63 aa14.05□□□□□ -0.16
CDKN3-204ENST00000442975 KLK12Q9UKR0 248 aa14.05□□□□□ -0.16
CDKN3-204ENST00000442975 SUMO4Q6EEV6 95 aa14.04□□□□□ -0.16
CDKN3-204ENST00000442975 LYPD6BQ8NI32 183 aa14.04□□□□□ -0.16
CDKN3-204ENST00000442975 EIF5A2Q9GZV4 153 aaKnown RBP14.04□□□□□ -0.16
CDKN3-204ENST00000442975 IGLV5-52A0A0A0MRZ9 124 aa14.03□□□□□ -0.16
CDKN3-204ENST00000442975 TRGC1P0CF51 173 aa14.03□□□□□ -0.16
CDKN3-204ENST00000442975 CTRLP40313 264 aa14.03□□□□□ -0.16
CDKN3-204ENST00000442975 Q8N814 137 aa14.03□□□□□ -0.16
CDKN3-204ENST00000442975 UBE2WQ96B02 151 aa14.03□□□□□ -0.16
CDKN3-204ENST00000442975 CHCHD5Q9BSY4 110 aa14.03□□□□□ -0.16
CDKN3-204ENST00000442975 H7C1H1 209 aa14.02□□□□□ -0.17
CDKN3-204ENST00000442975 LECT2O14960 151 aa14.02□□□□□ -0.17
CDKN3-204ENST00000442975 DNAJC30Q96LL9 226 aa14.02□□□□□ -0.17
CDKN3-204ENST00000442975 CHCHD7Q9BUK0 85 aa14.02□□□□□ -0.17
CDKN3-204ENST00000442975 IGKV2D-24A0A075B6R9 120 aa14.01□□□□□ -0.17
CDKN3-204ENST00000442975 NTF3P20783 257 aa14.01□□□□□ -0.17
CDKN3-204ENST00000442975 KRTAP10-1P60331 282 aa14.01□□□□□ -0.17
CDKN3-204ENST00000442975 ELOBQ15370 118 aa14.01□□□□□ -0.17
CDKN3-204ENST00000442975 TWIST1Q15672 202 aa14.01□□□□□ -0.17
CDKN3-204ENST00000442975 RMI2Q96E14 147 aa14.01□□□□□ -0.17
CDKN3-204ENST00000442975 M0QY20 66 aa14□□□□□ -0.17
CDKN3-204ENST00000442975 GCSHP23434 173 aa14□□□□□ -0.17
CDKN3-204ENST00000442975 WFDC2Q14508 124 aa14□□□□□ -0.17
CDKN3-204ENST00000442975 NTN5Q8WTR8 489 aaPredicted RBP14□□□□□ -0.17
CDKN3-204ENST00000442975 SMIM7Q9BQ49 75 aa14□□□□□ -0.17
CDKN3-204ENST00000442975 KRTAP4-5Q9BYR2 181 aa14□□□□□ -0.17
CDKN3-204ENST00000442975 DPH3P1Q9H4G8 78 aa14□□□□□ -0.17
CDKN3-204ENST00000442975 MPV17L2Q567V2 206 aa13.99□□□□□ -0.17
CDKN3-204ENST00000442975 C15orf54Q8N8G6 183 aa13.99□□□□□ -0.17
CDKN3-204ENST00000442975 GATCO43716 136 aaKnown RBP13.98□□□□□ -0.17
CDKN3-204ENST00000442975 CRPP02741 224 aa13.98□□□□□ -0.17
CDKN3-204ENST00000442975 TMEM97Q5BJF2 176 aa13.98□□□□□ -0.17
CDKN3-204ENST00000442975 FAM210AQ96ND0 272 aa13.98□□□□□ -0.17
CDKN3-204ENST00000442975 COX11Q9Y6N1 276 aa13.98□□□□□ -0.17
CDKN3-204ENST00000442975 RASL11AQ6T310 242 aa13.97□□□□□ -0.17
CDKN3-204ENST00000442975 GTSF1Q8WW33 167 aa13.97□□□□□ -0.17
CDKN3-204ENST00000442975 TRBV25-1A0A075B6N4 114 aa13.96□□□□□ -0.17
CDKN3-204ENST00000442975 ANGP03950 147 aaKnown RBP13.96□□□□□ -0.17
CDKN3-204ENST00000442975 PKIAP61925 76 aa13.96□□□□□ -0.17
CDKN3-204ENST00000442975 GAGE6Q13070 117 aa13.96□□□□□ -0.17
CDKN3-204ENST00000442975 WDR73Q6P4I2 378 aa13.96□□□□□ -0.17
CDKN3-204ENST00000442975 NTM-AS1Q6ZSK4 140 aa13.96□□□□□ -0.17
CDKN3-204ENST00000442975 Q8N1X5 172 aa13.96□□□□□ -0.17
CDKN3-204ENST00000442975 Q8N976 141 aa13.96□□□□□ -0.17
CDKN3-204ENST00000442975 BAALCQ8WXS3 180 aa13.96□□□□□ -0.17
CDKN3-204ENST00000442975 CNFNQ9BYD5 112 aa13.96□□□□□ -0.17
CDKN3-204ENST00000442975 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.94□□□□□ -0.18
CDKN3-204ENST00000442975 IGHV1-24A0A0C4DH33 117 aa13.94□□□□□ -0.18
CDKN3-204ENST00000442975 ZNF727A8MUV8 499 aa13.94□□□□□ -0.18
CDKN3-204ENST00000442975 FAM231DQ6ZW35 169 aa13.94□□□□□ -0.18
CDKN3-204ENST00000442975 SMIM15Q7Z3B0 74 aa13.94□□□□□ -0.18
CDKN3-204ENST00000442975 PGLYRP4Q96LB8 373 aa13.94□□□□□ -0.18
CDKN3-204ENST00000442975 TRAV26-2A0A0B4J265 109 aa13.93□□□□□ -0.18
CDKN3-204ENST00000442975 A8MWL6 223 aa13.93□□□□□ -0.18
CDKN3-204ENST00000442975 Q0VG73 95 aa13.93□□□□□ -0.18
CDKN3-204ENST00000442975 CLPSL2Q6UWE3 100 aa13.93□□□□□ -0.18
CDKN3-204ENST00000442975 LINC01551Q86U37 167 aa13.93□□□□□ -0.18
CDKN3-204ENST00000442975 C1orf43Q9BWL3 253 aa13.93□□□□□ -0.18
CDKN3-204ENST00000442975 SRP19P09132 144 aaKnown RBP13.92□□□□□ -0.18
CDKN3-204ENST00000442975 HAMPP81172 84 aa13.92□□□□□ -0.18
CDKN3-204ENST00000442975 IQCJQ1A5X6 159 aa13.92□□□□□ -0.18
CDKN3-204ENST00000442975 ATRAIDQ6UW56 229 aa13.92□□□□□ -0.18
CDKN3-204ENST00000442975 DEFB104AQ8WTQ1 72 aa13.92□□□□□ -0.18
CDKN3-204ENST00000442975 NIT2Q9NQR4 276 aa13.92□□□□□ -0.18
CDKN3-204ENST00000442975 FAT1Q14517 4588 aa13.91□□□□□ -0.18
CDKN3-204ENST00000442975 XGP55808 180 aa13.91□□□□□ -0.18
CDKN3-204ENST00000442975 RBX1P62877 108 aa13.91□□□□□ -0.18
CDKN3-204ENST00000442975 CT83Q5H943 113 aa13.91□□□□□ -0.18
CDKN3-204ENST00000442975 ENHOQ6UWT2 76 aa13.91□□□□□ -0.18
CDKN3-204ENST00000442975 BORCS7Q96B45 105 aa13.91□□□□□ -0.18
CDKN3-204ENST00000442975 NDUFS6O75380 124 aaKnown RBP13.9□□□□□ -0.18
CDKN3-204ENST00000442975 FOXA3P55318 350 aaPredicted RBP13.9□□□□□ -0.18
CDKN3-204ENST00000442975 TMEM243Q9BU79 118 aa13.9□□□□□ -0.18
CDKN3-204ENST00000442975 GATD1Q8NB37 220 aa13.89□□□□□ -0.19
CDKN3-204ENST00000442975 HLA-DQA1P01909 254 aa13.88□□□□□ -0.19
CDKN3-204ENST00000442975 COTL1Q14019 142 aa13.88□□□□□ -0.19
CDKN3-204ENST00000442975 TEX261Q6UWH6 196 aa13.88□□□□□ -0.19
CDKN3-204ENST00000442975 AMTP48728 403 aa13.87□□□□□ -0.19
CDKN3-204ENST00000442975 MIAQ16674 131 aa13.87□□□□□ -0.19
CDKN3-204ENST00000442975 LINC00269Q8N2A0 174 aa13.87□□□□□ -0.19
CDKN3-204ENST00000442975 TSKUQ8WUA8 353 aa13.87□□□□□ -0.19
CDKN3-204ENST00000442975 RPL39LQ96EH5 51 aaKnown RBP13.87□□□□□ -0.19
CDKN3-204ENST00000442975 DNAH8Q96JB1 4490 aa13.87□□□□□ -0.19
CDKN3-204ENST00000442975 HIGD1CA8MV81 97 aa13.86□□□□□ -0.19
CDKN3-204ENST00000442975 UBE2L6O14933 153 aa13.86□□□□□ -0.19
CDKN3-204ENST00000442975 TMEM70Q9BUB7 260 aa13.86□□□□□ -0.19
CDKN3-204ENST00000442975 OSTCQ9NRP0 149 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 102.1 ms