RNA–Protein interactions for RNA: ENST00000439974.3

ITGB1-207, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-207ENST00000439974 TWIST1Q15672 202 aa10.85□□□□□ -0.67
ITGB1-207ENST00000439974 OR10J3Q5JRS4 329 aa10.85□□□□□ -0.67
ITGB1-207ENST00000439974 ISOC2Q96AB3 205 aa10.85□□□□□ -0.67
ITGB1-207ENST00000439974 GTSF1LQ9H1H1 148 aa10.85□□□□□ -0.67
ITGB1-207ENST00000439974 NAT8Q9UHE5 227 aa10.85□□□□□ -0.67
ITGB1-207ENST00000439974 IGHV3-38A0A0C4DH36 116 aa10.84□□□□□ -0.67
ITGB1-207ENST00000439974 DNAH10OSP0CZ25 163 aa10.84□□□□□ -0.67
ITGB1-207ENST00000439974 FAM74A3Q4VXF1 159 aa10.84□□□□□ -0.67
ITGB1-207ENST00000439974 Q8N3U1 123 aa10.84□□□□□ -0.67
ITGB1-207ENST00000439974 NEXN-AS1Q8NBZ9 246 aa10.84□□□□□ -0.67
ITGB1-207ENST00000439974 A0A087WTM6 91 aa10.83□□□□□ -0.68
ITGB1-207ENST00000439974 A8MWL6 223 aa10.83□□□□□ -0.68
ITGB1-207ENST00000439974 FUSP35637 526 aaKnown RBP eCLIP10.83□□□□□ -0.68
ITGB1-207ENST00000439974 CLLU1Q5K131 121 aa10.83□□□□□ -0.68
ITGB1-207ENST00000439974 SUMO4Q6EEV6 95 aa10.83□□□□□ -0.68
ITGB1-207ENST00000439974 OSTCQ9NRP0 149 aa10.83□□□□□ -0.68
ITGB1-207ENST00000439974 V9GYV3 84 aa10.83□□□□□ -0.68
ITGB1-207ENST00000439974 IGHV3-30P01768 117 aa10.82□□□□□ -0.68
ITGB1-207ENST00000439974 IGHV3-33P01772 117 aa10.82□□□□□ -0.68
ITGB1-207ENST00000439974 IGHV3-30-3P0DP02 117 aa10.82□□□□□ -0.68
ITGB1-207ENST00000439974 IGHV3-30-5P0DP03 117 aa10.82□□□□□ -0.68
ITGB1-207ENST00000439974 TIRAPP58753 221 aa10.82□□□□□ -0.68
ITGB1-207ENST00000439974 RPL36AP83881 106 aaKnown RBP10.82□□□□□ -0.68
ITGB1-207ENST00000439974 LELP1Q5T871 98 aa10.82□□□□□ -0.68
ITGB1-207ENST00000439974 C10orf126Q8N4M7 172 aa10.82□□□□□ -0.68
ITGB1-207ENST00000439974 RPL36ALQ969Q0 106 aaKnown RBP10.82□□□□□ -0.68
ITGB1-207ENST00000439974 TRAV8-6A0A0B4J262 113 aa10.81□□□□□ -0.68
ITGB1-207ENST00000439974 TRBV10-1A0A0K0K1A3 114 aa10.81□□□□□ -0.68
ITGB1-207ENST00000439974 HIGD1CA8MV81 97 aa10.81□□□□□ -0.68
ITGB1-207ENST00000439974 TRGC1P0CF51 173 aa10.81□□□□□ -0.68
ITGB1-207ENST00000439974 UBE2D3P61077 147 aa10.81□□□□□ -0.68
ITGB1-207ENST00000439974 UBE2D2P62837 147 aa10.81□□□□□ -0.68
ITGB1-207ENST00000439974 CT83Q5H943 113 aa10.81□□□□□ -0.68
ITGB1-207ENST00000439974 C15orf54Q8N8G6 183 aa10.81□□□□□ -0.68
ITGB1-207ENST00000439974 OR10G8Q8NGN5 311 aa10.81□□□□□ -0.68
ITGB1-207ENST00000439974 DEFB104AQ8WTQ1 72 aa10.81□□□□□ -0.68
ITGB1-207ENST00000439974 TSKUQ8WUA8 353 aa10.81□□□□□ -0.68
ITGB1-207ENST00000439974 SMDT1Q9H4I9 107 aa10.81□□□□□ -0.68
ITGB1-207ENST00000439974 TRBV7-3A0A075B6L6 115 aa10.8□□□□□ -0.68
ITGB1-207ENST00000439974 TRAV26-2A0A0B4J265 109 aa10.8□□□□□ -0.68
ITGB1-207ENST00000439974 WDR73Q6P4I2 378 aa10.8□□□□□ -0.68
ITGB1-207ENST00000439974 CNFNQ9BYD5 112 aa10.8□□□□□ -0.68
ITGB1-207ENST00000439974 DPH3P1Q9H4G8 78 aa10.8□□□□□ -0.68
ITGB1-207ENST00000439974 EPM2AB3EWF7 344 aa10.79□□□□□ -0.68
ITGB1-207ENST00000439974 M0QY20 66 aa10.79□□□□□ -0.68
ITGB1-207ENST00000439974 HERC1Q15751 4861 aa10.79□□□□□ -0.68
ITGB1-207ENST00000439974 DNAH8Q96JB1 4490 aa10.78□□□□□ -0.68
ITGB1-207ENST00000439974 XGP55808 180 aa10.77□□□□□ -0.69
ITGB1-207ENST00000439974 LINC01556Q5JQF7 62 aa10.77□□□□□ -0.69
ITGB1-207ENST00000439974 NUP35Q8NFH5 326 aa10.77□□□□□ -0.69
ITGB1-207ENST00000439974 KRTAP10-1P60331 282 aa10.76□□□□□ -0.69
ITGB1-207ENST00000439974 GATD1Q8NB37 220 aa10.76□□□□□ -0.69
ITGB1-207ENST00000439974 BORCS7Q96B45 105 aa10.76□□□□□ -0.69
ITGB1-207ENST00000439974 GFRA4Q9GZZ7 299 aa10.76□□□□□ -0.69
ITGB1-207ENST00000439974 VPS13BQ7Z7G8 4022 aa10.76□□□□□ -0.69
ITGB1-207ENST00000439974 A0A1B0GUT8 65 aa10.75□□□□□ -0.69
ITGB1-207ENST00000439974 PSCAO43653 123 aa10.75□□□□□ -0.69
ITGB1-207ENST00000439974 GAS8-AS1O95177 125 aa10.75□□□□□ -0.69
ITGB1-207ENST00000439974 RASL11AQ6T310 242 aa10.75□□□□□ -0.69
ITGB1-207ENST00000439974 SMIM15Q7Z3B0 74 aa10.75□□□□□ -0.69
ITGB1-207ENST00000439974 DAZ4Q86SG3 579 aaKnown RBP10.75□□□□□ -0.69
ITGB1-207ENST00000439974 RPL39LQ96EH5 51 aaKnown RBP10.75□□□□□ -0.69
ITGB1-207ENST00000439974 Q9HAA7 133 aa10.75□□□□□ -0.69
ITGB1-207ENST00000439974 DAZ3Q9NR90 486 aaKnown RBP10.75□□□□□ -0.69
ITGB1-207ENST00000439974 A0A087WWC5 75 aa10.74□□□□□ -0.69
ITGB1-207ENST00000439974 GCSHP23434 173 aa10.74□□□□□ -0.69
ITGB1-207ENST00000439974 NTM-AS1Q6ZSK4 140 aa10.74□□□□□ -0.69
ITGB1-207ENST00000439974 SMIM27A0A1W2PRY6 76 aa10.73□□□□□ -0.69
ITGB1-207ENST00000439974 IBA57-AS1B1ANH7 110 aa10.73□□□□□ -0.69
ITGB1-207ENST00000439974 H7C1H1 209 aa10.73□□□□□ -0.69
ITGB1-207ENST00000439974 COMMD7Q86VX2 200 aa10.73□□□□□ -0.69
ITGB1-207ENST00000439974 DNAJC30Q96LL9 226 aa10.73□□□□□ -0.69
ITGB1-207ENST00000439974 NAT8BQ9UHF3 227 aa10.73□□□□□ -0.69
ITGB1-207ENST00000439974 TRBV6-8A0A0A6YYG3 113 aa10.72□□□□□ -0.69
ITGB1-207ENST00000439974 LRCOL1A6NCL2 159 aa10.72□□□□□ -0.69
ITGB1-207ENST00000439974 FAM231BA6NCW3 169 aa10.72□□□□□ -0.69
ITGB1-207ENST00000439974 ADCYAP1P18509 176 aa10.72□□□□□ -0.69
ITGB1-207ENST00000439974 NIT1Q86X76 327 aa10.72□□□□□ -0.69
ITGB1-207ENST00000439974 AMN1Q8IY45 258 aa10.72□□□□□ -0.69
ITGB1-207ENST00000439974 FRZBQ92765 325 aa10.72□□□□□ -0.69
ITGB1-207ENST00000439974 NIT2Q9NQR4 276 aa10.72□□□□□ -0.69
ITGB1-207ENST00000439974 IGLV5-52A0A0A0MRZ9 124 aa10.71□□□□□ -0.69
ITGB1-207ENST00000439974 TMEM262E9PQX1 116 aa10.71□□□□□ -0.69
ITGB1-207ENST00000439974 SMKR1H3BMG3 65 aa10.71□□□□□ -0.69
ITGB1-207ENST00000439974 CAMPP49913 170 aa10.71□□□□□ -0.69
ITGB1-207ENST00000439974 RIGQ13278 110 aa10.71□□□□□ -0.69
ITGB1-207ENST00000439974 Q5VSD8 79 aa10.71□□□□□ -0.69
ITGB1-207ENST00000439974 MRPL54Q6P161 138 aaKnown RBP10.71□□□□□ -0.69
ITGB1-207ENST00000439974 NTN5Q8WTR8 489 aaPredicted RBP10.71□□□□□ -0.69
ITGB1-207ENST00000439974 RNF185Q96GF1 192 aa10.71□□□□□ -0.69
ITGB1-207ENST00000439974 CHCHD5Q9BSY4 110 aa10.71□□□□□ -0.69
ITGB1-207ENST00000439974 NCR2O95944 276 aa10.7□□□□□ -0.7
ITGB1-207ENST00000439974 INAFM2P0DMQ5 153 aa10.7□□□□□ -0.7
ITGB1-207ENST00000439974 GAGE6Q13070 117 aa10.7□□□□□ -0.7
ITGB1-207ENST00000439974 TMEM191AQ9H0A3 160 aa10.7□□□□□ -0.7
ITGB1-207ENST00000439974 TMEM218A2RU14 115 aa10.69□□□□□ -0.7
ITGB1-207ENST00000439974 RAB4AP20338 218 aa10.69□□□□□ -0.7
ITGB1-207ENST00000439974 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.69□□□□□ -0.7
ITGB1-207ENST00000439974 KLK12Q9UKR0 248 aa10.69□□□□□ -0.7
ITGB1-207ENST00000439974 URGCP-MRPS24S4R325 110 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms