RNA–Protein interactions for RNA: ENST00000439185.1

UPP2-IT1-201, UPP2 intronic transcript 1, humanhuman

TSL 3 BASIC

Gene UPP2-IT1, Length 357 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPP2-IT1-201ENST00000439185 SIPA1L3O60292 1781 aaPredicted RBP-0.8□□□□□ -2.54
UPP2-IT1-201ENST00000439185 PLCE1Q9P212 2302 aa-0.81□□□□□ -2.54
UPP2-IT1-201ENST00000439185 EDDM3BP56851 147 aa-0.81□□□□□ -2.54
UPP2-IT1-201ENST00000439185 KRTAP20-2Q3LI61 65 aa-0.81□□□□□ -2.54
UPP2-IT1-201ENST00000439185 NDUFA12Q9UI09 145 aa-0.81□□□□□ -2.54
UPP2-IT1-201ENST00000439185 MUC22E2RYF6 1773 aaPredicted RBP-0.81□□□□□ -2.54
UPP2-IT1-201ENST00000439185 MYH13Q9UKX3 1938 aa-0.81□□□□□ -2.54
UPP2-IT1-201ENST00000439185 SPTBN1Q01082 2364 aaKnown RBP-0.82□□□□□ -2.54
UPP2-IT1-201ENST00000439185 TRBV10-3A0A0K0K1G6 114 aa-0.82□□□□□ -2.54
UPP2-IT1-201ENST00000439185 SPANXCQ9NY87 97 aa-0.82□□□□□ -2.54
UPP2-IT1-201ENST00000439185 MAP1BP46821 2468 aaKnown RBP-0.83□□□□□ -2.54
UPP2-IT1-201ENST00000439185 TRBV20-1A0A075B6N2 111 aa-0.83□□□□□ -2.54
UPP2-IT1-201ENST00000439185 PIN1P1O15428 100 aa-0.83□□□□□ -2.54
UPP2-IT1-201ENST00000439185 Q5VSD8 79 aa-0.83□□□□□ -2.54
UPP2-IT1-201ENST00000439185 WFDC6Q9BQY6 131 aa-0.83□□□□□ -2.54
UPP2-IT1-201ENST00000439185 FAT1Q14517 4588 aa-0.83□□□□□ -2.54
UPP2-IT1-201ENST00000439185 HERC2O95714 4834 aa-0.84□□□□□ -2.54
UPP2-IT1-201ENST00000439185 APC2O95996 2303 aa-0.84□□□□□ -2.54
UPP2-IT1-201ENST00000439185 NF1P21359 2839 aa-0.84□□□□□ -2.54
UPP2-IT1-201ENST00000439185 TRAV1-2A0A0B4J238 106 aa-0.84□□□□□ -2.54
UPP2-IT1-201ENST00000439185 S100A5P33763 92 aa-0.84□□□□□ -2.54
UPP2-IT1-201ENST00000439185 CCDC153Q494R4 210 aa-0.84□□□□□ -2.54
UPP2-IT1-201ENST00000439185 LRP1BQ9NZR2 4599 aa-0.84□□□□□ -2.54
UPP2-IT1-201ENST00000439185 IBTKQ9P2D0 1353 aaPredicted RBP-0.84□□□□□ -2.54
UPP2-IT1-201ENST00000439185 PPRC1Q5VV67 1664 aaKnown RBP-0.84□□□□□ -2.54
UPP2-IT1-201ENST00000439185 LAMA5O15230 3695 aa-0.85□□□□□ -2.55
UPP2-IT1-201ENST00000439185 PRM1P04553 51 aa-0.85□□□□□ -2.55
UPP2-IT1-201ENST00000439185 NBEAP1P0C6P0 100 aa-0.85□□□□□ -2.55
UPP2-IT1-201ENST00000439185 KRTAP19-8Q3LI54 63 aa-0.85□□□□□ -2.55
UPP2-IT1-201ENST00000439185 SPANXN1Q5VSR9 72 aa-0.85□□□□□ -2.55
UPP2-IT1-201ENST00000439185 Q5VV11 94 aa-0.85□□□□□ -2.55
UPP2-IT1-201ENST00000439185 VSTM2AQ8TAG5 236 aa-0.85□□□□□ -2.55
UPP2-IT1-201ENST00000439185 COL6A3P12111 3177 aa-0.85□□□□□ -2.55
UPP2-IT1-201ENST00000439185 CREBBPQ92793 2442 aa-0.85□□□□□ -2.55
UPP2-IT1-201ENST00000439185 NCS1P62166 190 aa-0.86□□□□□ -2.55
UPP2-IT1-201ENST00000439185 ZMYM4Q5VZL5 1548 aa-0.86□□□□□ -2.55
UPP2-IT1-201ENST00000439185 MAP1AP78559 2803 aaPredicted RBP-0.86□□□□□ -2.55
UPP2-IT1-201ENST00000439185 BSNQ9UPA5 3926 aa-0.86□□□□□ -2.55
UPP2-IT1-201ENST00000439185 ALMS1Q8TCU4 4167 aa-0.86□□□□□ -2.55
UPP2-IT1-201ENST00000439185 SYNJ1O43426 1573 aa-0.87□□□□□ -2.55
UPP2-IT1-201ENST00000439185 CLPSL1A2RUU4 121 aa-0.87□□□□□ -2.55
UPP2-IT1-201ENST00000439185 DBIP07108 87 aaKnown RBP-0.87□□□□□ -2.55
UPP2-IT1-201ENST00000439185 MORN2Q502X0 79 aa-0.87□□□□□ -2.55
UPP2-IT1-201ENST00000439185 C9orf116Q5BN46 136 aaPredicted RBP-0.87□□□□□ -2.55
UPP2-IT1-201ENST00000439185 SPANXA1Q9NS26 97 aa-0.87□□□□□ -2.55
UPP2-IT1-201ENST00000439185 RPRMQ9NS64 109 aa-0.87□□□□□ -2.55
UPP2-IT1-201ENST00000439185 PCLOQ9Y6V0 5065 aa-0.87□□□□□ -2.55
UPP2-IT1-201ENST00000439185 IFT172Q9UG01 1749 aa-0.87□□□□□ -2.55
UPP2-IT1-201ENST00000439185 PIRTP0C851 137 aa-0.88□□□□□ -2.55
UPP2-IT1-201ENST00000439185 UBE2D1P51668 147 aa-0.88□□□□□ -2.55
UPP2-IT1-201ENST00000439185 C10orf82Q8WW14 230 aa-0.88□□□□□ -2.55
UPP2-IT1-201ENST00000439185 SELENOSQ9BQE4 189 aa-0.88□□□□□ -2.55
UPP2-IT1-201ENST00000439185 SAR1AQ9NR31 198 aa-0.88□□□□□ -2.55
UPP2-IT1-201ENST00000439185 CDK5RAP2Q96SN8 1893 aa-0.88□□□□□ -2.55
UPP2-IT1-201ENST00000439185 TRAV22A0A0B4J277 110 aa-0.89□□□□□ -2.55
UPP2-IT1-201ENST00000439185 GNG14A0A1W2PPG7 69 aa-0.89□□□□□ -2.55
UPP2-IT1-201ENST00000439185 MIC13Q5XKP0 118 aa-0.89□□□□□ -2.55
UPP2-IT1-201ENST00000439185 NBEAL1Q6ZS30 2694 aa-0.89□□□□□ -2.55
UPP2-IT1-201ENST00000439185 FAT2Q9NYQ8 4349 aa-0.89□□□□□ -2.55
UPP2-IT1-201ENST00000439185 CSPG4Q6UVK1 2322 aa-0.89□□□□□ -2.55
UPP2-IT1-201ENST00000439185 STAB2Q8WWQ8 2551 aa-0.9□□□□□ -2.55
UPP2-IT1-201ENST00000439185 WNK1Q9H4A3 2382 aa-0.9□□□□□ -2.55
UPP2-IT1-201ENST00000439185 IFNA17P01571 189 aa-0.9□□□□□ -2.55
UPP2-IT1-201ENST00000439185 SPAG11BQ08648 103 aa-0.9□□□□□ -2.55
UPP2-IT1-201ENST00000439185 MMGT1Q8N4V1 131 aa-0.9□□□□□ -2.55
UPP2-IT1-201ENST00000439185 ACANP16112 2415 aa-0.9□□□□□ -2.55
UPP2-IT1-201ENST00000439185 USF3Q68DE3 2245 aa-0.91□□□□□ -2.55
UPP2-IT1-201ENST00000439185 APOC4-APOC2K7ER74 178 aa-0.91□□□□□ -2.56
UPP2-IT1-201ENST00000439185 SPRR1AP35321 89 aa-0.91□□□□□ -2.56
UPP2-IT1-201ENST00000439185 RPL7L1Q6DKI1 246 aaKnown RBP-0.91□□□□□ -2.56
UPP2-IT1-201ENST00000439185 Q8IZM0 81 aa-0.91□□□□□ -2.56
UPP2-IT1-201ENST00000439185 SETXQ7Z333 2677 aaKnown RBP-0.91□□□□□ -2.56
UPP2-IT1-201ENST00000439185 NEBP20929 6669 aa-0.91□□□□□ -2.56
UPP2-IT1-201ENST00000439185 ZNF609O15014 1411 aa-0.91□□□□□ -2.56
UPP2-IT1-201ENST00000439185 WNK3Q9BYP7 1800 aa-0.92□□□□□ -2.56
UPP2-IT1-201ENST00000439185 A6NIN4 97 aa-0.92□□□□□ -2.56
UPP2-IT1-201ENST00000439185 H0YJX3 145 aa-0.92□□□□□ -2.56
UPP2-IT1-201ENST00000439185 MT4P47944 62 aa-0.92□□□□□ -2.56
UPP2-IT1-201ENST00000439185 BAGE3Q86Y29 109 aa-0.92□□□□□ -2.56
UPP2-IT1-201ENST00000439185 SPCS1Q9Y6A9 102 aa-0.92□□□□□ -2.56
UPP2-IT1-201ENST00000439185 MYH6P13533 1939 aa-0.93□□□□□ -2.56
UPP2-IT1-201ENST00000439185 PLXNB2O15031 1838 aa-0.93□□□□□ -2.56
UPP2-IT1-201ENST00000439185 M0R129 80 aa-0.93□□□□□ -2.56
UPP2-IT1-201ENST00000439185 SMIM6P0DI80 62 aa-0.93□□□□□ -2.56
UPP2-IT1-201ENST00000439185 UBE2G1P62253 170 aa-0.93□□□□□ -2.56
UPP2-IT1-201ENST00000439185 CFAP126Q5VTH2 177 aa-0.93□□□□□ -2.56
UPP2-IT1-201ENST00000439185 OVOS2A0A0J9YW53 1432 aa-0.93□□□□□ -2.56
UPP2-IT1-201ENST00000439185 DAPK1P53355 1430 aa-0.93□□□□□ -2.56
UPP2-IT1-201ENST00000439185 OVOS2Q6IE36 1432 aa-0.93□□□□□ -2.56
UPP2-IT1-201ENST00000439185 GVINP1Q7Z2Y8 2422 aa-0.93□□□□□ -2.56
UPP2-IT1-201ENST00000439185 ADGRB1O14514 1584 aa-0.93□□□□□ -2.56
UPP2-IT1-201ENST00000439185 LRRC37A3O60309 1634 aa-0.93□□□□□ -2.56
UPP2-IT1-201ENST00000439185 KDM3BQ7LBC6 1761 aa-0.93□□□□□ -2.56
UPP2-IT1-201ENST00000439185 EP300Q09472 2414 aaPredicted RBP-0.94□□□□□ -2.56
UPP2-IT1-201ENST00000439185 FAM236AA0A1B0GUQ0 79 aa-0.94□□□□□ -2.56
UPP2-IT1-201ENST00000439185 FAM236BA0A1B0GV22 79 aa-0.94□□□□□ -2.56
UPP2-IT1-201ENST00000439185 FAM92AA1XBS5 289 aa-0.94□□□□□ -2.56
UPP2-IT1-201ENST00000439185 IGLC6P0CF74 106 aa-0.94□□□□□ -2.56
UPP2-IT1-201ENST00000439185 NEFHP12036 1026 aa-0.94□□□□□ -2.56
UPP2-IT1-201ENST00000439185 ZNF818PQ6ZRF7 136 aa-0.94□□□□□ -2.56
Retrieved 100 of 20,778 RNA–protein pairs in 1401.6 ms