RNA–Protein interactions for RNA: ENST00000437564.5

MCF2-205, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene MCF2, Length 1,988 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-205ENST00000437564 SPANXN1Q5VSR9 72 aa4.71□□□□□ -1.66
MCF2-205ENST00000437564 ENHOQ6UWT2 76 aa4.71□□□□□ -1.66
MCF2-205ENST00000437564 LINC00337Q8N6G1 96 aa4.71□□□□□ -1.66
MCF2-205ENST00000437564 LINC01560Q8TB33 94 aa4.71□□□□□ -1.66
MCF2-205ENST00000437564 IGHV1-45A0A0A0MS14 117 aa4.7□□□□□ -1.66
MCF2-205ENST00000437564 PRYO14603 147 aa4.7□□□□□ -1.66
MCF2-205ENST00000437564 ZNF833PQ6ZTB9 187 aa4.7□□□□□ -1.66
MCF2-205ENST00000437564 ITLN2Q8WWU7 325 aaPredicted RBP4.7□□□□□ -1.66
MCF2-205ENST00000437564 LITAFQ99732 161 aa4.7□□□□□ -1.66
MCF2-205ENST00000437564 TNRC6BQ9UPQ9 1833 aaKnown RBP4.7□□□□□ -1.66
MCF2-205ENST00000437564 TRAV12-3A0A0B4J271 114 aa4.69□□□□□ -1.66
MCF2-205ENST00000437564 C16orf90A8MZG2 172 aa4.69□□□□□ -1.66
MCF2-205ENST00000437564 GNRH2O43555 120 aa4.69□□□□□ -1.66
MCF2-205ENST00000437564 NDUFA12Q9UI09 145 aa4.69□□□□□ -1.66
MCF2-205ENST00000437564 C5orf67F2Z3F1 127 aa4.69□□□□□ -1.66
MCF2-205ENST00000437564 LHBP01229 141 aa4.69□□□□□ -1.66
MCF2-205ENST00000437564 SAA1P0DJI8 122 aaPredicted RBP4.69□□□□□ -1.66
MCF2-205ENST00000437564 PDE6HQ13956 83 aa4.69□□□□□ -1.66
MCF2-205ENST00000437564 ASB16-AS1Q495Z4 193 aa4.69□□□□□ -1.66
MCF2-205ENST00000437564 LY6G5CQ5SRR4 150 aa4.69□□□□□ -1.66
MCF2-205ENST00000437564 C17orf82Q86X59 251 aaPredicted RBP4.69□□□□□ -1.66
MCF2-205ENST00000437564 FAM30AQ9NZY2 134 aa4.69□□□□□ -1.66
MCF2-205ENST00000437564 A0A087X002 238 aa4.68□□□□□ -1.66
MCF2-205ENST00000437564 IGHV3OR16-9A0A0B4J2B5 98 aa4.68□□□□□ -1.66
MCF2-205ENST00000437564 HCG22E2RYF7 251 aa4.68□□□□□ -1.66
MCF2-205ENST00000437564 JMJD7-PLA2G4BH0Y9G9 81 aa4.68□□□□□ -1.66
MCF2-205ENST00000437564 PSPHP1O15172 72 aa4.68□□□□□ -1.66
MCF2-205ENST00000437564 FAM27BQ5VT28 67 aa4.68□□□□□ -1.66
MCF2-205ENST00000437564 Q6ZS52 159 aa4.68□□□□□ -1.66
MCF2-205ENST00000437564 LIMD2Q9BT23 127 aa4.68□□□□□ -1.66
MCF2-205ENST00000437564 C14orf132Q9NPU4 83 aa4.68□□□□□ -1.66
MCF2-205ENST00000437564 CACNA1DQ01668 2161 aa4.68□□□□□ -1.66
MCF2-205ENST00000437564 INTS1Q8N201 2190 aaKnown RBP4.68□□□□□ -1.66
MCF2-205ENST00000437564 IGHV4-4A0A075B6R2 117 aa4.67□□□□□ -1.66
MCF2-205ENST00000437564 IGLV3-19P01714 112 aa4.67□□□□□ -1.66
MCF2-205ENST00000437564 PRM2P04554 102 aa4.67□□□□□ -1.66
MCF2-205ENST00000437564 RNASE1P07998 156 aaKnown RBP4.67□□□□□ -1.66
MCF2-205ENST00000437564 SUMO2P61956 95 aaKnown RBP4.67□□□□□ -1.66
MCF2-205ENST00000437564 SPTSSBQ8NFR3 76 aa4.67□□□□□ -1.66
MCF2-205ENST00000437564 KRTAP4-9Q9BYQ8 210 aa4.67□□□□□ -1.66
MCF2-205ENST00000437564 ZNF503-AS2A6NEH8 195 aa4.67□□□□□ -1.66
MCF2-205ENST00000437564 GAS8-AS1O95177 125 aa4.67□□□□□ -1.66
MCF2-205ENST00000437564 NNATQ16517 81 aa4.67□□□□□ -1.66
MCF2-205ENST00000437564 TET2Q6N021 2002 aaPredicted RBP4.67□□□□□ -1.66
MCF2-205ENST00000437564 PRRC2AP48634 2157 aaKnown RBP4.67□□□□□ -1.66
MCF2-205ENST00000437564 MED12Q93074 2177 aa4.67□□□□□ -1.66
MCF2-205ENST00000437564 IGHV1-69P01742 117 aa4.66□□□□□ -1.66
MCF2-205ENST00000437564 ERHP84090 104 aaKnown RBP4.66□□□□□ -1.66
MCF2-205ENST00000437564 C15orf32Q32M92 178 aa4.66□□□□□ -1.66
MCF2-205ENST00000437564 CLLU1OSQ5K130 101 aa4.66□□□□□ -1.66
MCF2-205ENST00000437564 Q5VV11 94 aa4.66□□□□□ -1.66
MCF2-205ENST00000437564 CCL4L1Q8NHW4 92 aa4.66□□□□□ -1.66
MCF2-205ENST00000437564 COX14Q96I36 57 aa4.66□□□□□ -1.66
MCF2-205ENST00000437564 ARRDC1-AS1Q9H2J1 176 aa4.66□□□□□ -1.66
MCF2-205ENST00000437564 MRPL36Q9P0J6 103 aaKnown RBP4.66□□□□□ -1.66
MCF2-205ENST00000437564 KIF25-AS1Q9Y6Z4 181 aa4.66□□□□□ -1.66
MCF2-205ENST00000437564 H0YGX0 51 aa4.65□□□□□ -1.66
MCF2-205ENST00000437564 IGHV3-9P01782 118 aa4.65□□□□□ -1.66
MCF2-205ENST00000437564 KRTAP5-3Q6L8H2 238 aa4.65□□□□□ -1.66
MCF2-205ENST00000437564 C11orf72Q8NBR9 251 aa4.65□□□□□ -1.66
MCF2-205ENST00000437564 IGKV1D-37A0A075B6S9 117 aa4.65□□□□□ -1.67
MCF2-205ENST00000437564 TRBV6-8A0A0A6YYG3 113 aa4.65□□□□□ -1.67
MCF2-205ENST00000437564 C12orf77C9JDV5 145 aa4.65□□□□□ -1.67
MCF2-205ENST00000437564 TRGV3P03979 118 aa4.65□□□□□ -1.67
MCF2-205ENST00000437564 PRR3P79522 188 aaKnown RBP4.65□□□□□ -1.67
MCF2-205ENST00000437564 NREPQ16612 68 aa4.65□□□□□ -1.67
MCF2-205ENST00000437564 KLK15Q9H2R5 256 aa4.65□□□□□ -1.67
MCF2-205ENST00000437564 CDC42SE1Q9NRR8 79 aa4.65□□□□□ -1.67
MCF2-205ENST00000437564 MSRB1Q9NZV6 116 aa4.65□□□□□ -1.67
MCF2-205ENST00000437564 UNC13CQ8NB66 2214 aa4.64□□□□□ -1.67
MCF2-205ENST00000437564 DSCAMO60469 2012 aa4.64□□□□□ -1.67
MCF2-205ENST00000437564 CHKB-CPT1BH3BT56 60 aa4.64□□□□□ -1.67
MCF2-205ENST00000437564 PROP1O75360 226 aa4.64□□□□□ -1.67
MCF2-205ENST00000437564 CLPSP04118 112 aa4.64□□□□□ -1.67
MCF2-205ENST00000437564 IGKV1-16P04430 117 aa4.64□□□□□ -1.67
MCF2-205ENST00000437564 PATE4P0C8F1 98 aa4.64□□□□□ -1.67
MCF2-205ENST00000437564 C6orf99Q4VX62 202 aa4.64□□□□□ -1.67
MCF2-205ENST00000437564 PCNX2A6NKB5 2137 aa4.64□□□□□ -1.67
MCF2-205ENST00000437564 C3orf84H3BNL1 204 aa4.64□□□□□ -1.67
MCF2-205ENST00000437564 PSCAO43653 123 aa4.64□□□□□ -1.67
MCF2-205ENST00000437564 Q75L30 129 aa4.64□□□□□ -1.67
MCF2-205ENST00000437564 C8orf49Q96NF6 230 aa4.64□□□□□ -1.67
MCF2-205ENST00000437564 TRAV10A0A0B4J240 114 aa4.63□□□□□ -1.67
MCF2-205ENST00000437564 TSHBP01222 138 aa4.63□□□□□ -1.67
MCF2-205ENST00000437564 FBXL19-AS1Q494R0 122 aa4.63□□□□□ -1.67
MCF2-205ENST00000437564 C1orf64Q8NEQ6 169 aa4.63□□□□□ -1.67
MCF2-205ENST00000437564 WFDC9Q8NEX5 89 aa4.63□□□□□ -1.67
MCF2-205ENST00000437564 KRTAP4-2Q9BYR5 136 aa4.63□□□□□ -1.67
MCF2-205ENST00000437564 Q9HAA7 133 aa4.63□□□□□ -1.67
MCF2-205ENST00000437564 FREM1Q5H8C1 2179 aa4.62□□□□□ -1.67
MCF2-205ENST00000437564 CTSGP08311 255 aa4.62□□□□□ -1.67
MCF2-205ENST00000437564 USF3Q68DE3 2245 aa4.62□□□□□ -1.67
MCF2-205ENST00000437564 C10orf142B7Z368 130 aa4.62□□□□□ -1.67
MCF2-205ENST00000437564 H0YGG7 62 aa4.62□□□□□ -1.67
MCF2-205ENST00000437564 IGHV3-30-3P0DP02 117 aa4.62□□□□□ -1.67
MCF2-205ENST00000437564 SPINK2P20155 84 aa4.62□□□□□ -1.67
MCF2-205ENST00000437564 C9orf116Q5BN46 136 aaPredicted RBP4.62□□□□□ -1.67
MCF2-205ENST00000437564 SCXQ7RTU7 201 aa4.62□□□□□ -1.67
MCF2-205ENST00000437564 NOTCH2NLQ7Z3S9 236 aa4.62□□□□□ -1.67
MCF2-205ENST00000437564 ZNF625Q96I27 306 aaPredicted RBP4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms