RNA–Protein interactions for RNA: ENST00000435997.2

SPTLC1P4-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 4, humanhuman

BASIC

Gene SPTLC1P4, Length 260 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P4-201ENST00000435997 VAX2Q9UIW0 290 aa7.05□□□□□ -1.28
SPTLC1P4-201ENST00000435997 FXYD6-FXYD2A0A087WZ82 144 aa7.04□□□□□ -1.28
SPTLC1P4-201ENST00000435997 PKIAP61925 76 aa7.04□□□□□ -1.28
SPTLC1P4-201ENST00000435997 NTM-AS1Q6ZSK4 140 aa7.04□□□□□ -1.28
SPTLC1P4-201ENST00000435997 C9orf163Q8N9P6 203 aa7.04□□□□□ -1.28
SPTLC1P4-201ENST00000435997 MLST8Q9BVC4 326 aa7.04□□□□□ -1.28
SPTLC1P4-201ENST00000435997 CYTL1Q9NRR1 136 aa7.04□□□□□ -1.28
SPTLC1P4-201ENST00000435997 PLA2G2DQ9UNK4 145 aa7.04□□□□□ -1.28
SPTLC1P4-201ENST00000435997 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.04□□□□□ -1.28
SPTLC1P4-201ENST00000435997 TMEM262E9PQX1 116 aa7.03□□□□□ -1.28
SPTLC1P4-201ENST00000435997 PANO1I0J062 215 aa7.03□□□□□ -1.28
SPTLC1P4-201ENST00000435997 HLA-DQA1P01909 254 aa7.03□□□□□ -1.28
SPTLC1P4-201ENST00000435997 ANGP03950 147 aaKnown RBP7.03□□□□□ -1.28
SPTLC1P4-201ENST00000435997 OR5AL1P0C617 328 aa7.03□□□□□ -1.28
SPTLC1P4-201ENST00000435997 MT1HL1P0DM35 61 aa7.03□□□□□ -1.28
SPTLC1P4-201ENST00000435997 AKR1C3P42330 323 aa7.03□□□□□ -1.28
SPTLC1P4-201ENST00000435997 RPL19P84098 196 aaKnown RBP7.03□□□□□ -1.28
SPTLC1P4-201ENST00000435997 CIRBPQ14011 172 aaKnown RBP7.03□□□□□ -1.28
SPTLC1P4-201ENST00000435997 ZNF56Q15929 161 aa7.03□□□□□ -1.28
SPTLC1P4-201ENST00000435997 DGAT2L7PQ6IED9 249 aa7.03□□□□□ -1.28
SPTLC1P4-201ENST00000435997 KIF25-AS1Q9Y6Z4 181 aa7.02□□□□□ -1.29
SPTLC1P4-201ENST00000435997 CNBPP62633 177 aaKnown RBP7.01□□□□□ -1.29
SPTLC1P4-201ENST00000435997 RBX1P62877 108 aa7.01□□□□□ -1.29
SPTLC1P4-201ENST00000435997 IQCJQ1A5X6 159 aa7.01□□□□□ -1.29
SPTLC1P4-201ENST00000435997 TMEM97Q5BJF2 176 aa7.01□□□□□ -1.29
SPTLC1P4-201ENST00000435997 CST9LP1Q5W188 147 aa7.01□□□□□ -1.29
SPTLC1P4-201ENST00000435997 SDIM1Q6ZPB5 146 aa7.01□□□□□ -1.29
SPTLC1P4-201ENST00000435997 CHCHD5Q9BSY4 110 aa7.01□□□□□ -1.29
SPTLC1P4-201ENST00000435997 ZNF471Q9BX82 626 aaPredicted RBP7.01□□□□□ -1.29
SPTLC1P4-201ENST00000435997 SCO2A0A1W2PP80 73 aa7□□□□□ -1.29
SPTLC1P4-201ENST00000435997 PAGE4O60829 102 aa7□□□□□ -1.29
SPTLC1P4-201ENST00000435997 CLPSL2Q6UWE3 100 aa7□□□□□ -1.29
SPTLC1P4-201ENST00000435997 STOML3Q8TAV4 291 aa7□□□□□ -1.29
SPTLC1P4-201ENST00000435997 KRTAP4-12Q9BQ66 201 aa7□□□□□ -1.29
SPTLC1P4-201ENST00000435997 PKHD1L1Q86WI1 4243 aa7□□□□□ -1.29
SPTLC1P4-201ENST00000435997 ARPC5O15511 151 aa6.99□□□□□ -1.29
SPTLC1P4-201ENST00000435997 S100A9P06702 114 aaKnown RBP6.99□□□□□ -1.29
SPTLC1P4-201ENST00000435997 LINC00269Q8N2A0 174 aa6.99□□□□□ -1.29
SPTLC1P4-201ENST00000435997 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.99□□□□□ -1.29
SPTLC1P4-201ENST00000435997 CLRN3Q8NCR9 226 aa6.99□□□□□ -1.29
SPTLC1P4-201ENST00000435997 AP1S3Q96PC3 154 aa6.99□□□□□ -1.29
SPTLC1P4-201ENST00000435997 TRBV25-1A0A075B6N4 114 aa6.98□□□□□ -1.29
SPTLC1P4-201ENST00000435997 MUC21A0A0G2JKD1 596 aa6.98□□□□□ -1.29
SPTLC1P4-201ENST00000435997 MUC21A0A140T8X8 626 aa6.98□□□□□ -1.29
SPTLC1P4-201ENST00000435997 M0QY20 66 aa6.98□□□□□ -1.29
SPTLC1P4-201ENST00000435997 GAGE6Q13070 117 aa6.98□□□□□ -1.29
SPTLC1P4-201ENST00000435997 SPANXN1Q5VSR9 72 aa6.98□□□□□ -1.29
SPTLC1P4-201ENST00000435997 Q6ZRU5 148 aa6.98□□□□□ -1.29
SPTLC1P4-201ENST00000435997 BAGE2Q86Y30 109 aa6.98□□□□□ -1.29
SPTLC1P4-201ENST00000435997 C20orf203Q8NBC4 194 aa6.98□□□□□ -1.29
SPTLC1P4-201ENST00000435997 MBD3L1Q8WWY6 194 aa6.98□□□□□ -1.29
SPTLC1P4-201ENST00000435997 DERL1Q9BUN8 251 aa6.98□□□□□ -1.29
SPTLC1P4-201ENST00000435997 UBR4Q5T4S7 5183 aa6.97□□□□□ -1.29
SPTLC1P4-201ENST00000435997 SLPIP03973 132 aa6.97□□□□□ -1.29
SPTLC1P4-201ENST00000435997 IGLC6P0CF74 106 aa6.97□□□□□ -1.29
SPTLC1P4-201ENST00000435997 REG3AQ06141 175 aa6.97□□□□□ -1.29
SPTLC1P4-201ENST00000435997 ZNF345Q14585 488 aa6.97□□□□□ -1.29
SPTLC1P4-201ENST00000435997 IGHV1-24A0A0C4DH33 117 aa6.96□□□□□ -1.3
SPTLC1P4-201ENST00000435997 A0A1B0GUV1 79 aa6.96□□□□□ -1.3
SPTLC1P4-201ENST00000435997 UMAD1C9J7I0 102 aa6.96□□□□□ -1.3
SPTLC1P4-201ENST00000435997 F5H697 171 aa6.96□□□□□ -1.3
SPTLC1P4-201ENST00000435997 SPACA4Q8TDM5 124 aa6.96□□□□□ -1.3
SPTLC1P4-201ENST00000435997 SFT2D1Q8WV19 159 aa6.96□□□□□ -1.3
SPTLC1P4-201ENST00000435997 C11orf52Q96A22 123 aa6.96□□□□□ -1.3
SPTLC1P4-201ENST00000435997 KRTAP9-9Q9BYP9 154 aa6.96□□□□□ -1.3
SPTLC1P4-201ENST00000435997 KRTAP9-4Q9BYQ2 154 aa6.96□□□□□ -1.3
SPTLC1P4-201ENST00000435997 GFRA4Q9GZZ7 299 aa6.96□□□□□ -1.3
SPTLC1P4-201ENST00000435997 IGLV4-60A0A075B6I1 120 aa6.95□□□□□ -1.3
SPTLC1P4-201ENST00000435997 IGLV10-54A0A075B6I4 117 aa6.95□□□□□ -1.3
SPTLC1P4-201ENST00000435997 TRAV8-4A0A0B4J246 113 aa6.95□□□□□ -1.3
SPTLC1P4-201ENST00000435997 A0A0D9SG52 128 aa6.95□□□□□ -1.3
SPTLC1P4-201ENST00000435997 PFDN1O60925 122 aa6.95□□□□□ -1.3
SPTLC1P4-201ENST00000435997 P01737 135 aa6.95□□□□□ -1.3
SPTLC1P4-201ENST00000435997 RPL35P42766 123 aaKnown RBP6.95□□□□□ -1.3
SPTLC1P4-201ENST00000435997 SUMO4Q6EEV6 95 aa6.95□□□□□ -1.3
SPTLC1P4-201ENST00000435997 KCNRGQ8N5I3 272 aa6.95□□□□□ -1.3
SPTLC1P4-201ENST00000435997 FAM213BQ8TBF2 198 aa6.95□□□□□ -1.3
SPTLC1P4-201ENST00000435997 RNF185Q96GF1 192 aa6.95□□□□□ -1.3
SPTLC1P4-201ENST00000435997 PGLYRP4Q96LB8 373 aa6.95□□□□□ -1.3
SPTLC1P4-201ENST00000435997 A0A087WYN8 130 aa6.94□□□□□ -1.3
SPTLC1P4-201ENST00000435997 KRTAP4-8A0A0G2JLE6 195 aa6.94□□□□□ -1.3
SPTLC1P4-201ENST00000435997 hDV102S1A0JD36 115 aa6.94□□□□□ -1.3
SPTLC1P4-201ENST00000435997 SMIM17P0DL12 118 aa6.94□□□□□ -1.3
SPTLC1P4-201ENST00000435997 TMUB2Q71RG4 321 aa6.94□□□□□ -1.3
SPTLC1P4-201ENST00000435997 BATF3Q9NR55 127 aa6.94□□□□□ -1.3
SPTLC1P4-201ENST00000435997 A0A1B0GV50 99 aa6.93□□□□□ -1.3
SPTLC1P4-201ENST00000435997 C19orf71A6NCJ1 209 aa6.93□□□□□ -1.3
SPTLC1P4-201ENST00000435997 SMLR1H3BR10 107 aa6.93□□□□□ -1.3
SPTLC1P4-201ENST00000435997 H7C1H1 209 aa6.93□□□□□ -1.3
SPTLC1P4-201ENST00000435997 CHTF8P0CG12 524 aa6.93□□□□□ -1.3
SPTLC1P4-201ENST00000435997 GZMBP10144 247 aa6.93□□□□□ -1.3
SPTLC1P4-201ENST00000435997 C15orf56Q8N910 161 aa6.93□□□□□ -1.3
SPTLC1P4-201ENST00000435997 FER1L6-AS1Q8NA97 138 aa6.93□□□□□ -1.3
SPTLC1P4-201ENST00000435997 TMEM243Q9BU79 118 aa6.93□□□□□ -1.3
SPTLC1P4-201ENST00000435997 PLAC8Q9NZF1 115 aa6.93□□□□□ -1.3
SPTLC1P4-201ENST00000435997 IGHV3-64A0A075B6Q5 118 aa6.92□□□□□ -1.3
SPTLC1P4-201ENST00000435997 MGPP08493 103 aa6.92□□□□□ -1.3
SPTLC1P4-201ENST00000435997 NKX2-5P52952 324 aaPredicted RBP6.92□□□□□ -1.3
SPTLC1P4-201ENST00000435997 SSTP61278 116 aa6.92□□□□□ -1.3
SPTLC1P4-201ENST00000435997 CENPWQ5EE01 88 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms