RNA–Protein interactions for RNA: ENST00000435706.6

TOP2B-204, Transcript of DNA topoisomerase II beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TOP2B, Length 5,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2B-204ENST00000435706 U3KQK5 164 aa17.12■□□□□ 0.33
TOP2B-204ENST00000435706 IGHV4-28A0A0C4DH34 117 aa17.12■□□□□ 0.33
TOP2B-204ENST00000435706 IGHV4-38-2P0DP08 117 aa17.11■□□□□ 0.33
TOP2B-204ENST00000435706 GYPEP15421 78 aa17.11■□□□□ 0.33
TOP2B-204ENST00000435706 NCOA6Q14686 2063 aaPredicted RBP17.11■□□□□ 0.33
TOP2B-204ENST00000435706 NCR3O14931 201 aa17.11■□□□□ 0.33
TOP2B-204ENST00000435706 LINC00574Q9H8X3 128 aa17.11■□□□□ 0.33
TOP2B-204ENST00000435706 Q96MF0 132 aa17.1■□□□□ 0.33
TOP2B-204ENST00000435706 DEFB121Q5J5C9 76 aa17.1■□□□□ 0.33
TOP2B-204ENST00000435706 TMEM256-PLSCR3K7ERE1 68 aa17.1■□□□□ 0.33
TOP2B-204ENST00000435706 WFDC9Q8NEX5 89 aa17.1■□□□□ 0.33
TOP2B-204ENST00000435706 TNRC6BQ9UPQ9 1833 aaKnown RBP17.09■□□□□ 0.33
TOP2B-204ENST00000435706 SP5Q6BEB4 398 aaPredicted RBP17.09■□□□□ 0.33
TOP2B-204ENST00000435706 PRB2P02812 416 aaPredicted RBP17.08■□□□□ 0.33
TOP2B-204ENST00000435706 UNQ9165/PRO28630Q6UXU0 137 aa17.08■□□□□ 0.33
TOP2B-204ENST00000435706 SEM1Q6ZVN7 128 aa17.08■□□□□ 0.33
TOP2B-204ENST00000435706 CRIP1P50238 77 aa17.08■□□□□ 0.33
TOP2B-204ENST00000435706 SPATA25Q9BR10 227 aa17.08■□□□□ 0.33
TOP2B-204ENST00000435706 ZNF106Q9H2Y7 1883 aaKnown RBP17.08■□□□□ 0.32
TOP2B-204ENST00000435706 MYCNOSP40205 109 aa17.07■□□□□ 0.32
TOP2B-204ENST00000435706 C3orf22Q8N5N4 141 aa17.07■□□□□ 0.32
TOP2B-204ENST00000435706 TRAV23DV6A0A075B6W5 121 aa17.07■□□□□ 0.32
TOP2B-204ENST00000435706 CAMK2N2Q96S95 79 aa17.07■□□□□ 0.32
TOP2B-204ENST00000435706 HIST2H2BDQ6DRA6 164 aa17.06■□□□□ 0.32
TOP2B-204ENST00000435706 IGKV2D-24A0A075B6R9 120 aa17.06■□□□□ 0.32
TOP2B-204ENST00000435706 RMI2Q96E14 147 aa17.06■□□□□ 0.32
TOP2B-204ENST00000435706 CCL24O00175 119 aa17.06■□□□□ 0.32
TOP2B-204ENST00000435706 P0DMU3 169 aa17.06■□□□□ 0.32
TOP2B-204ENST00000435706 FAM231AP0DMU4 169 aa17.06■□□□□ 0.32
TOP2B-204ENST00000435706 FAM231CP0DMU5 169 aa17.06■□□□□ 0.32
TOP2B-204ENST00000435706 IGHV4-61A0A0C4DH41 118 aa17.06■□□□□ 0.32
TOP2B-204ENST00000435706 SDIM1Q6ZPB5 146 aa17.06■□□□□ 0.32
TOP2B-204ENST00000435706 RNF185Q96GF1 192 aa17.06■□□□□ 0.32
TOP2B-204ENST00000435706 ETDCA0A1B0GVM5 59 aa17.05■□□□□ 0.32
TOP2B-204ENST00000435706 BRK1Q8WUW1 75 aa17.05■□□□□ 0.32
TOP2B-204ENST00000435706 IGHV4OR15-8A0A075B7B6 117 aa17.05■□□□□ 0.32
TOP2B-204ENST00000435706 A0A087WW49 117 aa17.05■□□□□ 0.32
TOP2B-204ENST00000435706 GPHB5Q86YW7 130 aa17.05■□□□□ 0.32
TOP2B-204ENST00000435706 MP68P56378 58 aa17.05■□□□□ 0.32
TOP2B-204ENST00000435706 TRIAP1O43715 76 aa17.05■□□□□ 0.32
TOP2B-204ENST00000435706 A0A0J9YX75 114 aa17.04■□□□□ 0.32
TOP2B-204ENST00000435706 TMEM223A0PJW6 202 aa17.04■□□□□ 0.32
TOP2B-204ENST00000435706 UBE2BP63146 152 aa17.04■□□□□ 0.32
TOP2B-204ENST00000435706 NDUFS5O43920 106 aa17.04■□□□□ 0.32
TOP2B-204ENST00000435706 LINC00310P59036 64 aa17.04■□□□□ 0.32
TOP2B-204ENST00000435706 TRBV12-3P01733 135 aa17.03■□□□□ 0.32
TOP2B-204ENST00000435706 PIP4P1Q86T03 277 aa17.03■□□□□ 0.32
TOP2B-204ENST00000435706 CCDC140Q96MF4 163 aa17.03■□□□□ 0.32
TOP2B-204ENST00000435706 PLCE1Q9P212 2302 aa17.03■□□□□ 0.32
TOP2B-204ENST00000435706 ZNF22P17026 224 aaPredicted RBP17.03■□□□□ 0.32
TOP2B-204ENST00000435706 ZFP36P26651 326 aaKnown RBP17.03■□□□□ 0.32
TOP2B-204ENST00000435706 UPK3BQ9BT76 320 aa17.02■□□□□ 0.32
TOP2B-204ENST00000435706 TRBV30A0A0K0K1B3 111 aa17.02■□□□□ 0.32
TOP2B-204ENST00000435706 IGHV3-33P01772 117 aa17.02■□□□□ 0.32
TOP2B-204ENST00000435706 CFAP126Q5VTH2 177 aa17.02■□□□□ 0.32
TOP2B-204ENST00000435706 NACAE9PAV3 2078 aa17.02■□□□□ 0.32
TOP2B-204ENST00000435706 CXCL5P42830 114 aa17.02■□□□□ 0.31
TOP2B-204ENST00000435706 C20orf197Q8N268 126 aa17.01■□□□□ 0.31
TOP2B-204ENST00000435706 Q8N976 141 aa17.01■□□□□ 0.31
TOP2B-204ENST00000435706 MRPS12O15235 138 aaKnown RBP17■□□□□ 0.31
TOP2B-204ENST00000435706 FREM1Q5H8C1 2179 aa17■□□□□ 0.31
TOP2B-204ENST00000435706 IGLV2-11P01706 119 aa17■□□□□ 0.31
TOP2B-204ENST00000435706 RPL18AQ02543 176 aaKnown RBP16.99■□□□□ 0.31
TOP2B-204ENST00000435706 PDE6GP18545 87 aa16.99■□□□□ 0.31
TOP2B-204ENST00000435706 DIRC1Q969H9 104 aa16.99■□□□□ 0.31
TOP2B-204ENST00000435706 ZGRF1Q86YA3 2104 aa16.98■□□□□ 0.31
TOP2B-204ENST00000435706 XGP55808 180 aa16.98■□□□□ 0.31
TOP2B-204ENST00000435706 HIGD2BQ4VC39 106 aa16.97■□□□□ 0.31
TOP2B-204ENST00000435706 SIRPDQ9H106 197 aa16.97■□□□□ 0.31
TOP2B-204ENST00000435706 FAM236DA0A1B0GTK5 79 aa16.97■□□□□ 0.31
TOP2B-204ENST00000435706 FAM236CP0DP71 79 aa16.97■□□□□ 0.31
TOP2B-204ENST00000435706 IGLV4-3A0A075B6K6 122 aa16.97■□□□□ 0.31
TOP2B-204ENST00000435706 WISP2O76076 250 aa16.96■□□□□ 0.31
TOP2B-204ENST00000435706 IGHV3-30P01768 117 aa16.96■□□□□ 0.31
TOP2B-204ENST00000435706 IGHV3-30-5P0DP03 117 aa16.96■□□□□ 0.31
TOP2B-204ENST00000435706 SPRY4Q9C004 299 aa16.96■□□□□ 0.31
TOP2B-204ENST00000435706 INSL3P51460 131 aa16.96■□□□□ 0.31
TOP2B-204ENST00000435706 CDKN2A-AS1Q9UH64 79 aa16.96■□□□□ 0.3
TOP2B-204ENST00000435706 HHLA3Q9XRX5 114 aa16.96■□□□□ 0.3
TOP2B-204ENST00000435706 NDUFA1O15239 70 aa16.95■□□□□ 0.3
TOP2B-204ENST00000435706 KIAA1549LQ6ZVL6 1849 aa16.95■□□□□ 0.3
TOP2B-204ENST00000435706 IGF1P05019 195 aa16.95■□□□□ 0.3
TOP2B-204ENST00000435706 IGHV4-30-2A0A087WSY4 118 aa16.95■□□□□ 0.3
TOP2B-204ENST00000435706 DSCAML1Q8TD84 2053 aa16.94■□□□□ 0.3
TOP2B-204ENST00000435706 TRBV10-1A0A0K0K1A3 114 aa16.94■□□□□ 0.3
TOP2B-204ENST00000435706 CCDC179H3BU77 68 aa16.94■□□□□ 0.3
TOP2B-204ENST00000435706 LINC00308Q8TCZ7 52 aa16.94■□□□□ 0.3
TOP2B-204ENST00000435706 SPAG11BQ08648 103 aa16.94■□□□□ 0.3
TOP2B-204ENST00000435706 KIF26AQ9ULI4 1882 aaPredicted RBP16.93■□□□□ 0.3
TOP2B-204ENST00000435706 NDUFA7O95182 113 aa16.93■□□□□ 0.3
TOP2B-204ENST00000435706 CLUHP3Q96NS8 147 aa16.92■□□□□ 0.3
TOP2B-204ENST00000435706 ODF3BA8MYP8 253 aa16.92■□□□□ 0.3
TOP2B-204ENST00000435706 LINC00467Q9BRT7 94 aa16.92■□□□□ 0.3
TOP2B-204ENST00000435706 C20orf173Q96LM9 149 aa16.92■□□□□ 0.3
TOP2B-204ENST00000435706 A0A1W2PNU3 283 aaPredicted RBP16.91■□□□□ 0.3
TOP2B-204ENST00000435706 ATP5EP2Q5VTU8 51 aa16.91■□□□□ 0.3
TOP2B-204ENST00000435706 TMEM89A2RUT3 159 aa16.91■□□□□ 0.3
TOP2B-204ENST00000435706 UFSP1Q6NVU6 142 aa16.91■□□□□ 0.3
TOP2B-204ENST00000435706 ESM1Q9NQ30 184 aa16.91■□□□□ 0.3
TOP2B-204ENST00000435706 SMAD5-AS1Q9Y6J3 95 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 107.1 ms