RNA–Protein interactions for RNA: ENST00000435455.5

SMPD4-207, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-207ENST00000435455 FAM74A3Q4VXF1 159 aa10.94□□□□□ -0.66
SMPD4-207ENST00000435455 SPATA12Q7Z6I5 190 aa10.94□□□□□ -0.66
SMPD4-207ENST00000435455 LINC01551Q86U37 167 aa10.94□□□□□ -0.66
SMPD4-207ENST00000435455 URGCP-MRPS24S4R325 110 aa10.94□□□□□ -0.66
SMPD4-207ENST00000435455 DYNC1H1Q14204 4646 aaKnown RBP10.94□□□□□ -0.66
SMPD4-207ENST00000435455 PEA15Q15121 130 aa10.93□□□□□ -0.66
SMPD4-207ENST00000435455 TWIST1Q15672 202 aa10.93□□□□□ -0.66
SMPD4-207ENST00000435455 TMEM97Q5BJF2 176 aa10.93□□□□□ -0.66
SMPD4-207ENST00000435455 NIT1Q86X76 327 aa10.93□□□□□ -0.66
SMPD4-207ENST00000435455 DNAJC30Q96LL9 226 aa10.93□□□□□ -0.66
SMPD4-207ENST00000435455 CHCHD7Q9BUK0 85 aa10.93□□□□□ -0.66
SMPD4-207ENST00000435455 SMDT1Q9H4I9 107 aa10.93□□□□□ -0.66
SMPD4-207ENST00000435455 Q9HAA7 133 aa10.93□□□□□ -0.66
SMPD4-207ENST00000435455 TRBV6-8A0A0A6YYG3 113 aa10.92□□□□□ -0.66
SMPD4-207ENST00000435455 M0QY20 66 aa10.92□□□□□ -0.66
SMPD4-207ENST00000435455 PSCAO43653 123 aa10.92□□□□□ -0.66
SMPD4-207ENST00000435455 TMEM241Q24JQ0 296 aa10.92□□□□□ -0.66
SMPD4-207ENST00000435455 SUMO4Q6EEV6 95 aa10.92□□□□□ -0.66
SMPD4-207ENST00000435455 KCNIP4Q6PIL6 250 aa10.92□□□□□ -0.66
SMPD4-207ENST00000435455 SMIM15Q7Z3B0 74 aa10.92□□□□□ -0.66
SMPD4-207ENST00000435455 DAZ4Q86SG3 579 aaKnown RBP10.92□□□□□ -0.66
SMPD4-207ENST00000435455 GTSF1Q8WW33 167 aa10.92□□□□□ -0.66
SMPD4-207ENST00000435455 DAZ3Q9NR90 486 aaKnown RBP10.92□□□□□ -0.66
SMPD4-207ENST00000435455 OSTCQ9NRP0 149 aa10.92□□□□□ -0.66
SMPD4-207ENST00000435455 A0A087WX48 190 aa10.91□□□□□ -0.66
SMPD4-207ENST00000435455 TRAV8-3A0A0A6YYJ7 113 aa10.91□□□□□ -0.66
SMPD4-207ENST00000435455 RASL11AQ6T310 242 aa10.91□□□□□ -0.66
SMPD4-207ENST00000435455 Q8N3U1 123 aa10.91□□□□□ -0.66
SMPD4-207ENST00000435455 KIAA1109Q2LD37 5005 aa10.9□□□□□ -0.66
SMPD4-207ENST00000435455 A0A087WTM6 91 aa10.9□□□□□ -0.66
SMPD4-207ENST00000435455 FOXA3P55318 350 aaPredicted RBP10.9□□□□□ -0.66
SMPD4-207ENST00000435455 KRTAP10-2P60368 255 aa10.9□□□□□ -0.66
SMPD4-207ENST00000435455 PKIAP61925 76 aa10.9□□□□□ -0.66
SMPD4-207ENST00000435455 ELOBQ15370 118 aa10.9□□□□□ -0.66
SMPD4-207ENST00000435455 C15orf54Q8N8G6 183 aa10.9□□□□□ -0.66
SMPD4-207ENST00000435455 PGLYRP4Q96LB8 373 aa10.9□□□□□ -0.66
SMPD4-207ENST00000435455 TM2D2Q9BX73 214 aa10.9□□□□□ -0.66
SMPD4-207ENST00000435455 FAM231BA6NCW3 169 aa10.89□□□□□ -0.67
SMPD4-207ENST00000435455 TSKUQ8WUA8 353 aa10.89□□□□□ -0.67
SMPD4-207ENST00000435455 BORCS7Q96B45 105 aa10.89□□□□□ -0.67
SMPD4-207ENST00000435455 GFRA4Q9GZZ7 299 aa10.89□□□□□ -0.67
SMPD4-207ENST00000435455 NIT2Q9NQR4 276 aa10.89□□□□□ -0.67
SMPD4-207ENST00000435455 PGPEP1Q9NXJ5 209 aa10.89□□□□□ -0.67
SMPD4-207ENST00000435455 HERC2O95714 4834 aa10.89□□□□□ -0.67
SMPD4-207ENST00000435455 C9JQL5 133 aa10.88□□□□□ -0.67
SMPD4-207ENST00000435455 NAT8Q9UHE5 227 aa10.88□□□□□ -0.67
SMPD4-207ENST00000435455 TMEM262E9PQX1 116 aa10.87□□□□□ -0.67
SMPD4-207ENST00000435455 RPL23P62829 140 aaKnown RBP10.87□□□□□ -0.67
SMPD4-207ENST00000435455 SRSF3P84103 164 aaKnown RBP10.87□□□□□ -0.67
SMPD4-207ENST00000435455 CDPF1Q6NVV7 123 aa10.87□□□□□ -0.67
SMPD4-207ENST00000435455 FRZBQ92765 325 aa10.87□□□□□ -0.67
SMPD4-207ENST00000435455 ISOC2Q96AB3 205 aa10.87□□□□□ -0.67
SMPD4-207ENST00000435455 RMI2Q96E14 147 aa10.87□□□□□ -0.67
SMPD4-207ENST00000435455 CHCHD5Q9BSY4 110 aa10.87□□□□□ -0.67
SMPD4-207ENST00000435455 COX11Q9Y6N1 276 aa10.87□□□□□ -0.67
SMPD4-207ENST00000435455 TRBV25-1A0A075B6N4 114 aa10.86□□□□□ -0.67
SMPD4-207ENST00000435455 A0A1B0GUT8 65 aa10.86□□□□□ -0.67
SMPD4-207ENST00000435455 HIGD1CA8MV81 97 aa10.86□□□□□ -0.67
SMPD4-207ENST00000435455 RAB14P61106 215 aa10.86□□□□□ -0.67
SMPD4-207ENST00000435455 ADIRFQ15847 76 aa10.86□□□□□ -0.67
SMPD4-207ENST00000435455 NTM-AS1Q6ZSK4 140 aa10.86□□□□□ -0.67
SMPD4-207ENST00000435455 KLK12Q9UKR0 248 aa10.86□□□□□ -0.67
SMPD4-207ENST00000435455 V9GYV3 84 aa10.86□□□□□ -0.67
SMPD4-207ENST00000435455 IGHV1-24A0A0C4DH33 117 aa10.85□□□□□ -0.67
SMPD4-207ENST00000435455 IQCJQ1A5X6 159 aa10.85□□□□□ -0.67
SMPD4-207ENST00000435455 GATD1Q8NB37 220 aa10.85□□□□□ -0.67
SMPD4-207ENST00000435455 LRCOL1A6NCL2 159 aa10.84□□□□□ -0.67
SMPD4-207ENST00000435455 Q0VG73 95 aa10.84□□□□□ -0.67
SMPD4-207ENST00000435455 UBE2WQ96B02 151 aa10.84□□□□□ -0.67
SMPD4-207ENST00000435455 CDK2AP2O75956 126 aa10.83□□□□□ -0.68
SMPD4-207ENST00000435455 MPV17L2Q567V2 206 aa10.83□□□□□ -0.68
SMPD4-207ENST00000435455 LRP1BQ9NZR2 4599 aa10.83□□□□□ -0.68
SMPD4-207ENST00000435455 TRAV26-2A0A0B4J265 109 aa10.82□□□□□ -0.68
SMPD4-207ENST00000435455 ANGP03950 147 aaKnown RBP10.82□□□□□ -0.68
SMPD4-207ENST00000435455 COTL1Q14019 142 aa10.82□□□□□ -0.68
SMPD4-207ENST00000435455 ATRAIDQ6UW56 229 aa10.82□□□□□ -0.68
SMPD4-207ENST00000435455 TMEM191AQ9H0A3 160 aa10.82□□□□□ -0.68
SMPD4-207ENST00000435455 DNAH5Q8TE73 4624 aa10.81□□□□□ -0.68
SMPD4-207ENST00000435455 CRPP02741 224 aa10.81□□□□□ -0.68
SMPD4-207ENST00000435455 RIGQ13278 110 aa10.81□□□□□ -0.68
SMPD4-207ENST00000435455 NUP35Q8NFH5 326 aa10.81□□□□□ -0.68
SMPD4-207ENST00000435455 NTN5Q8WTR8 489 aaPredicted RBP10.81□□□□□ -0.68
SMPD4-207ENST00000435455 TMEM243Q9BU79 118 aa10.81□□□□□ -0.68
SMPD4-207ENST00000435455 NAT8BQ9UHF3 227 aa10.81□□□□□ -0.68
SMPD4-207ENST00000435455 IGKV2D-24A0A075B6R9 120 aa10.8□□□□□ -0.68
SMPD4-207ENST00000435455 RBX1P62877 108 aa10.8□□□□□ -0.68
SMPD4-207ENST00000435455 GAGE6Q13070 117 aa10.8□□□□□ -0.68
SMPD4-207ENST00000435455 RPL39LQ96EH5 51 aaKnown RBP10.8□□□□□ -0.68
SMPD4-207ENST00000435455 RYR1P21817 5038 aa10.8□□□□□ -0.68
SMPD4-207ENST00000435455 Q8N814 137 aa10.79□□□□□ -0.68
SMPD4-207ENST00000435455 Q8N976 141 aa10.79□□□□□ -0.68
SMPD4-207ENST00000435455 C1orf43Q9BWL3 253 aa10.79□□□□□ -0.68
SMPD4-207ENST00000435455 SMIM27A0A1W2PRY6 76 aa10.78□□□□□ -0.68
SMPD4-207ENST00000435455 FUSP35637 526 aaKnown RBP eCLIP10.78□□□□□ -0.68
SMPD4-207ENST00000435455 AMTP48728 403 aa10.78□□□□□ -0.68
SMPD4-207ENST00000435455 ENHOQ6UWT2 76 aa10.78□□□□□ -0.68
SMPD4-207ENST00000435455 IGLV5-52A0A0A0MRZ9 124 aa10.77□□□□□ -0.69
SMPD4-207ENST00000435455 TRBV6-5A0A0K0K1A5 114 aa10.77□□□□□ -0.69
SMPD4-207ENST00000435455 SDHAF1A6NFY7 115 aa10.77□□□□□ -0.69
SMPD4-207ENST00000435455 NCR2O95944 276 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms