RNA–Protein interactions for RNA: ENST00000433394.1

USP54-206, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-206ENST00000433394 CHCHD2Q9Y6H1 151 aaPredicted RBP2.71□□□□□ -1.98
USP54-206ENST00000433394 ALPK2Q86TB3 2170 aa2.7□□□□□ -1.98
USP54-206ENST00000433394 TRAV27A0A087WT01 109 aa2.7□□□□□ -1.98
USP54-206ENST00000433394 TRAV13-1A0A0B4J241 112 aa2.7□□□□□ -1.98
USP54-206ENST00000433394 OR2T8A6NH00 312 aa2.7□□□□□ -1.98
USP54-206ENST00000433394 CPSF4LA6NMK7 179 aaKnown RBP2.7□□□□□ -1.98
USP54-206ENST00000433394 LST1O00453 97 aa2.7□□□□□ -1.98
USP54-206ENST00000433394 TAX1BP3O14907 124 aa2.7□□□□□ -1.98
USP54-206ENST00000433394 MT-ND6P03923 174 aa2.7□□□□□ -1.98
USP54-206ENST00000433394 CTSDP07339 412 aaPredicted RBP2.7□□□□□ -1.98
USP54-206ENST00000433394 FREM3P0C091 2139 aa2.7□□□□□ -1.98
USP54-206ENST00000433394 ASAH2BP0C7U1 165 aa2.7□□□□□ -1.98
USP54-206ENST00000433394 RRN3P1Q2M238 152 aa2.7□□□□□ -1.98
USP54-206ENST00000433394 C12orf73Q69YU5 71 aa2.7□□□□□ -1.98
USP54-206ENST00000433394 FOXI2Q6ZQN5 318 aa2.7□□□□□ -1.98
USP54-206ENST00000433394 CARD19Q96LW7 228 aa2.7□□□□□ -1.98
USP54-206ENST00000433394 ERMAPQ96PL5 475 aaPredicted RBP2.7□□□□□ -1.98
USP54-206ENST00000433394 NAA60Q9H7X0 242 aa2.7□□□□□ -1.98
USP54-206ENST00000433394 OTORQ9NRC9 128 aa2.7□□□□□ -1.98
USP54-206ENST00000433394 CMC2Q9NRP2 79 aa2.7□□□□□ -1.98
USP54-206ENST00000433394 AKAP13Q12802 2813 aa2.7□□□□□ -1.98
USP54-206ENST00000433394 EML6Q6ZMW3 1958 aa2.7□□□□□ -1.98
USP54-206ENST00000433394 DMXL2Q8TDJ6 3036 aa2.7□□□□□ -1.98
USP54-206ENST00000433394 DSPP15924 2871 aaKnown RBP2.7□□□□□ -1.98
USP54-206ENST00000433394 POLEQ07864 2286 aa2.7□□□□□ -1.98
USP54-206ENST00000433394 WDFY3Q8IZQ1 3526 aa2.69□□□□□ -1.98
USP54-206ENST00000433394 PKD1L2Q7Z442 2459 aa2.69□□□□□ -1.98
USP54-206ENST00000433394 CACNA1CQ13936 2221 aa2.69□□□□□ -1.98
USP54-206ENST00000433394 KIAA1549Q9HCM3 1950 aa2.69□□□□□ -1.98
USP54-206ENST00000433394 COL6A6A6NMZ7 2263 aa2.69□□□□□ -1.98
USP54-206ENST00000433394 IGHV3-64A0A075B6Q5 118 aa2.69□□□□□ -1.98
USP54-206ENST00000433394 IGHV1-58A0A0C4DH39 117 aa2.69□□□□□ -1.98
USP54-206ENST00000433394 TRBV7-6A0A0J9YX20 115 aa2.69□□□□□ -1.98
USP54-206ENST00000433394 TMEM262E9PQX1 116 aa2.69□□□□□ -1.98
USP54-206ENST00000433394 H3BMG7 143 aa2.69□□□□□ -1.98
USP54-206ENST00000433394 CCDC179H3BU77 68 aa2.69□□□□□ -1.98
USP54-206ENST00000433394 PDCD5O14737 125 aa2.69□□□□□ -1.98
USP54-206ENST00000433394 RER1O15258 196 aa2.69□□□□□ -1.98
USP54-206ENST00000433394 NAPSAO96009 420 aa2.69□□□□□ -1.98
USP54-206ENST00000433394 PYYP10082 97 aa2.69□□□□□ -1.98
USP54-206ENST00000433394 SRP14P37108 136 aaKnown RBP2.69□□□□□ -1.98
USP54-206ENST00000433394 FOXA3P55318 350 aaPredicted RBP2.69□□□□□ -1.98
USP54-206ENST00000433394 NNATQ16517 81 aa2.69□□□□□ -1.98
USP54-206ENST00000433394 C9orf153Q5TBE3 101 aa2.69□□□□□ -1.98
USP54-206ENST00000433394 AADACL3Q5VUY0 350 aa2.69□□□□□ -1.98
USP54-206ENST00000433394 LCA10Q71F78 164 aa2.69□□□□□ -1.98
USP54-206ENST00000433394 ATOH7Q8N100 152 aa2.69□□□□□ -1.98
USP54-206ENST00000433394 OR4B1Q8NGF8 309 aa2.69□□□□□ -1.98
USP54-206ENST00000433394 AQP10Q96PS8 301 aa2.69□□□□□ -1.98
USP54-206ENST00000433394 SEC11CQ9BY50 192 aa2.69□□□□□ -1.98
USP54-206ENST00000433394 DSCAMO60469 2012 aa2.69□□□□□ -1.98
USP54-206ENST00000433394 EPG5Q9HCE0 2579 aa2.68□□□□□ -1.98
USP54-206ENST00000433394 DCHS1Q96JQ0 3298 aa2.68□□□□□ -1.98
USP54-206ENST00000433394 MGAQ8IWI9 3026 aa2.68□□□□□ -1.98
USP54-206ENST00000433394 CFAP47Q6ZTR5 3102 aa2.68□□□□□ -1.98
USP54-206ENST00000433394 IGKV1D-42A0A075B6H8 117 aa2.68□□□□□ -1.98
USP54-206ENST00000433394 FAM236AA0A1B0GUQ0 79 aa2.68□□□□□ -1.98
USP54-206ENST00000433394 FAM236BA0A1B0GV22 79 aa2.68□□□□□ -1.98
USP54-206ENST00000433394 A8MUN3 132 aa2.68□□□□□ -1.98
USP54-206ENST00000433394 GEMIN2O14893 280 aaKnown RBP2.68□□□□□ -1.98
USP54-206ENST00000433394 HIST1H2BOP23527 126 aa2.68□□□□□ -1.98
USP54-206ENST00000433394 HIST1H2BBP33778 126 aa2.68□□□□□ -1.98
USP54-206ENST00000433394 INSL3P51460 131 aa2.68□□□□□ -1.98
USP54-206ENST00000433394 HIST1H2BDP58876 126 aa2.68□□□□□ -1.98
USP54-206ENST00000433394 LSM3P62310 102 aaKnown RBP2.68□□□□□ -1.98
USP54-206ENST00000433394 HIST1H2BCP62807 126 aa2.68□□□□□ -1.98
USP54-206ENST00000433394 KLRD1Q13241 179 aa2.68□□□□□ -1.98
USP54-206ENST00000433394 SS18Q15532 418 aa2.68□□□□□ -1.98
USP54-206ENST00000433394 HIST2H2BEQ16778 126 aa2.68□□□□□ -1.98
USP54-206ENST00000433394 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.68□□□□□ -1.98
USP54-206ENST00000433394 Q6ZTI0 123 aa2.68□□□□□ -1.98
USP54-206ENST00000433394 HIST1H2BHQ93079 126 aa2.68□□□□□ -1.98
USP54-206ENST00000433394 HIST1H2BNQ99877 126 aa2.68□□□□□ -1.98
USP54-206ENST00000433394 HIST1H2BMQ99879 126 aa2.68□□□□□ -1.98
USP54-206ENST00000433394 MYO18BQ8IUG5 2567 aa2.68□□□□□ -1.98
USP54-206ENST00000433394 ANKHD1Q8IWZ3 2542 aaKnown RBP2.68□□□□□ -1.98
USP54-206ENST00000433394 TNRC6AQ8NDV7 1962 aaKnown RBP2.67□□□□□ -1.98
USP54-206ENST00000433394 BOD1L1Q8NFC6 3051 aa2.67□□□□□ -1.98
USP54-206ENST00000433394 IGLV3-9A0A075B6K5 115 aa2.67□□□□□ -1.98
USP54-206ENST00000433394 TRGV10A0A0A0MS01 117 aa2.67□□□□□ -1.98
USP54-206ENST00000433394 C3orf85A0A1B0GTC6 90 aa2.67□□□□□ -1.98
USP54-206ENST00000433394 ODAMA1E959 279 aa2.67□□□□□ -1.98
USP54-206ENST00000433394 UQCRQO14949 82 aa2.67□□□□□ -1.98
USP54-206ENST00000433394 TRACP01848 142 aa2.67□□□□□ -1.98
USP54-206ENST00000433394 KRTAP10-1P60331 282 aa2.67□□□□□ -1.98
USP54-206ENST00000433394 RPL18Q07020 188 aaKnown RBP2.67□□□□□ -1.98
USP54-206ENST00000433394 Q56UQ5 140 aa2.67□□□□□ -1.98
USP54-206ENST00000433394 LINC01545Q5VT33 79 aa2.67□□□□□ -1.98
USP54-206ENST00000433394 Q6ZS92 163 aa2.67□□□□□ -1.98
USP54-206ENST00000433394 OR8D4Q8NGM9 314 aa2.67□□□□□ -1.98
USP54-206ENST00000433394 OR5AK2Q8NH90 309 aa2.67□□□□□ -1.98
USP54-206ENST00000433394 PFN4Q8NHR9 129 aa2.67□□□□□ -1.98
USP54-206ENST00000433394 DCANP1Q8TF63 244 aa2.67□□□□□ -1.98
USP54-206ENST00000433394 YPEL2Q96QA6 119 aa2.67□□□□□ -1.98
USP54-206ENST00000433394 IMMP2LQ96T52 175 aa2.67□□□□□ -1.98
USP54-206ENST00000433394 WFDC6Q9BQY6 131 aa2.67□□□□□ -1.98
USP54-206ENST00000433394 PROK2Q9HC23 129 aa2.67□□□□□ -1.98
USP54-206ENST00000433394 SLC39A9Q9NUM3 307 aa2.67□□□□□ -1.98
USP54-206ENST00000433394 LOC400499M0QZD8 3231 aa2.67□□□□□ -1.98
USP54-206ENST00000433394 NBASA2RRP1 2371 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms