RNA–Protein interactions for RNA: ENST00000429427.1

SSR4P1-202, Transcript of signal sequence receptor subunit 4 pseudogene 1, humanhuman

TSL 5 BASIC

Gene SSR4P1, Length 967 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P1-202ENST00000429427 NTM-AS1Q6ZSK4 140 aa12.03□□□□□ -0.48
SSR4P1-202ENST00000429427 MAPKAPK5-AS1Q8N8E1 139 aa12.03□□□□□ -0.48
SSR4P1-202ENST00000429427 RPP21Q9H633 154 aaKnown RBP12.03□□□□□ -0.48
SSR4P1-202ENST00000429427 BIN3Q9NQY0 253 aa12.03□□□□□ -0.48
SSR4P1-202ENST00000429427 TRBV6-8A0A0A6YYG3 113 aa12.02□□□□□ -0.49
SSR4P1-202ENST00000429427 KRTAP10-1P60331 282 aa12.02□□□□□ -0.49
SSR4P1-202ENST00000429427 CACNG7P62955 275 aa12.02□□□□□ -0.49
SSR4P1-202ENST00000429427 SUMO4Q6EEV6 95 aa12.02□□□□□ -0.49
SSR4P1-202ENST00000429427 CDPF1Q6NVV7 123 aa12.02□□□□□ -0.49
SSR4P1-202ENST00000429427 GTSF1Q8WW33 167 aa12.02□□□□□ -0.49
SSR4P1-202ENST00000429427 CNFNQ9BYD5 112 aa12.02□□□□□ -0.49
SSR4P1-202ENST00000429427 FAT1Q14517 4588 aa12.01□□□□□ -0.49
SSR4P1-202ENST00000429427 XKRY2A2RUG3 117 aa12.01□□□□□ -0.49
SSR4P1-202ENST00000429427 F2Z2F3 143 aa12.01□□□□□ -0.49
SSR4P1-202ENST00000429427 PSCAO43653 123 aa12.01□□□□□ -0.49
SSR4P1-202ENST00000429427 NTF3P20783 257 aa12.01□□□□□ -0.49
SSR4P1-202ENST00000429427 FAM210AQ96ND0 272 aa12.01□□□□□ -0.49
SSR4P1-202ENST00000429427 DNAH8Q96JB1 4490 aa12□□□□□ -0.49
SSR4P1-202ENST00000429427 MGPP08493 103 aa12□□□□□ -0.49
SSR4P1-202ENST00000429427 SMIM17P0DL12 118 aa12□□□□□ -0.49
SSR4P1-202ENST00000429427 KLK12Q9UKR0 248 aa12□□□□□ -0.49
SSR4P1-202ENST00000429427 CEBPGP53567 150 aa11.99□□□□□ -0.49
SSR4P1-202ENST00000429427 Q8N814 137 aa11.99□□□□□ -0.49
SSR4P1-202ENST00000429427 TRAV8-3A0A0A6YYJ7 113 aa11.98□□□□□ -0.49
SSR4P1-202ENST00000429427 SRP19P09132 144 aaKnown RBP11.98□□□□□ -0.49
SSR4P1-202ENST00000429427 MPV17L2Q567V2 206 aa11.98□□□□□ -0.49
SSR4P1-202ENST00000429427 WDR73Q6P4I2 378 aa11.98□□□□□ -0.49
SSR4P1-202ENST00000429427 CHCHD7Q9BUK0 85 aa11.98□□□□□ -0.49
SSR4P1-202ENST00000429427 XGP55808 180 aa11.97□□□□□ -0.49
SSR4P1-202ENST00000429427 FAM231DQ6ZW35 169 aa11.97□□□□□ -0.49
SSR4P1-202ENST00000429427 EIF5A2Q9GZV4 153 aaKnown RBP11.97□□□□□ -0.49
SSR4P1-202ENST00000429427 URGCP-MRPS24S4R325 110 aa11.97□□□□□ -0.49
SSR4P1-202ENST00000429427 A0A087WX48 190 aa11.96□□□□□ -0.49
SSR4P1-202ENST00000429427 C9JQL5 133 aa11.96□□□□□ -0.49
SSR4P1-202ENST00000429427 LECT2O14960 151 aa11.96□□□□□ -0.49
SSR4P1-202ENST00000429427 NDUFS6O75380 124 aaKnown RBP11.96□□□□□ -0.49
SSR4P1-202ENST00000429427 FOXA3P55318 350 aaPredicted RBP11.96□□□□□ -0.49
SSR4P1-202ENST00000429427 LINC01551Q86U37 167 aa11.96□□□□□ -0.49
SSR4P1-202ENST00000429427 SMIM7Q9BQ49 75 aa11.96□□□□□ -0.49
SSR4P1-202ENST00000429427 TM2D2Q9BX73 214 aa11.96□□□□□ -0.49
SSR4P1-202ENST00000429427 DPH3P1Q9H4G8 78 aa11.96□□□□□ -0.49
SSR4P1-202ENST00000429427 TRGC1P0CF51 173 aa11.95□□□□□ -0.5
SSR4P1-202ENST00000429427 TWIST1Q15672 202 aa11.95□□□□□ -0.5
SSR4P1-202ENST00000429427 ATRAIDQ6UW56 229 aa11.95□□□□□ -0.5
SSR4P1-202ENST00000429427 ENHOQ6UWT2 76 aa11.95□□□□□ -0.5
SSR4P1-202ENST00000429427 Q8N1X5 172 aa11.95□□□□□ -0.5
SSR4P1-202ENST00000429427 Q8N976 141 aa11.95□□□□□ -0.5
SSR4P1-202ENST00000429427 UBE2WQ96B02 151 aa11.95□□□□□ -0.5
SSR4P1-202ENST00000429427 GATCO43716 136 aaKnown RBP11.94□□□□□ -0.5
SSR4P1-202ENST00000429427 GCSHP23434 173 aa11.94□□□□□ -0.5
SSR4P1-202ENST00000429427 RASL11AQ6T310 242 aa11.94□□□□□ -0.5
SSR4P1-202ENST00000429427 IGLV5-52A0A0A0MRZ9 124 aa11.93□□□□□ -0.5
SSR4P1-202ENST00000429427 TRAV26-2A0A0B4J265 109 aa11.93□□□□□ -0.5
SSR4P1-202ENST00000429427 TMEM262E9PQX1 116 aa11.93□□□□□ -0.5
SSR4P1-202ENST00000429427 H7C1H1 209 aa11.93□□□□□ -0.5
SSR4P1-202ENST00000429427 SRSF3P84103 164 aaKnown RBP11.93□□□□□ -0.5
SSR4P1-202ENST00000429427 IQCJQ1A5X6 159 aa11.93□□□□□ -0.5
SSR4P1-202ENST00000429427 TEX261Q6UWH6 196 aa11.93□□□□□ -0.5
SSR4P1-202ENST00000429427 GATD1Q8NB37 220 aa11.93□□□□□ -0.5
SSR4P1-202ENST00000429427 DEFB104AQ8WTQ1 72 aa11.93□□□□□ -0.5
SSR4P1-202ENST00000429427 NTN5Q8WTR8 489 aaPredicted RBP11.93□□□□□ -0.5
SSR4P1-202ENST00000429427 BAALCQ8WXS3 180 aa11.93□□□□□ -0.5
SSR4P1-202ENST00000429427 CHCHD5Q9BSY4 110 aa11.93□□□□□ -0.5
SSR4P1-202ENST00000429427 CT83Q5H943 113 aa11.92□□□□□ -0.5
SSR4P1-202ENST00000429427 C15orf54Q8N8G6 183 aa11.92□□□□□ -0.5
SSR4P1-202ENST00000429427 PGLYRP4Q96LB8 373 aa11.92□□□□□ -0.5
SSR4P1-202ENST00000429427 IGKV2D-24A0A075B6R9 120 aa11.91□□□□□ -0.5
SSR4P1-202ENST00000429427 ZNF727A8MUV8 499 aa11.91□□□□□ -0.5
SSR4P1-202ENST00000429427 RBX1P62877 108 aa11.91□□□□□ -0.5
SSR4P1-202ENST00000429427 GAGE6Q13070 117 aa11.91□□□□□ -0.5
SSR4P1-202ENST00000429427 NIT2Q9NQR4 276 aa11.91□□□□□ -0.5
SSR4P1-202ENST00000429427 TRBV25-1A0A075B6N4 114 aa11.9□□□□□ -0.5
SSR4P1-202ENST00000429427 A8MWL6 223 aa11.9□□□□□ -0.5
SSR4P1-202ENST00000429427 HAMPP81172 84 aa11.9□□□□□ -0.5
SSR4P1-202ENST00000429427 ELOBQ15370 118 aa11.9□□□□□ -0.5
SSR4P1-202ENST00000429427 TMEM97Q5BJF2 176 aa11.9□□□□□ -0.5
SSR4P1-202ENST00000429427 ANGP03950 147 aaKnown RBP11.89□□□□□ -0.51
SSR4P1-202ENST00000429427 KCNIP4Q6PIL6 250 aa11.89□□□□□ -0.51
SSR4P1-202ENST00000429427 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.89□□□□□ -0.51
SSR4P1-202ENST00000429427 RPL39LQ96EH5 51 aaKnown RBP11.89□□□□□ -0.51
SSR4P1-202ENST00000429427 PRR34Q9NV39 138 aa11.89□□□□□ -0.51
SSR4P1-202ENST00000429427 COX11Q9Y6N1 276 aa11.89□□□□□ -0.51
SSR4P1-202ENST00000429427 IGHV1-24A0A0C4DH33 117 aa11.88□□□□□ -0.51
SSR4P1-202ENST00000429427 GAS8-AS1O95177 125 aa11.88□□□□□ -0.51
SSR4P1-202ENST00000429427 TSKUQ8WUA8 353 aa11.88□□□□□ -0.51
SSR4P1-202ENST00000429427 RMI2Q96E14 147 aa11.88□□□□□ -0.51
SSR4P1-202ENST00000429427 OSTCQ9NRP0 149 aa11.88□□□□□ -0.51
SSR4P1-202ENST00000429427 FAM30AQ9NZY2 134 aa11.88□□□□□ -0.51
SSR4P1-202ENST00000429427 V9GYV3 84 aa11.88□□□□□ -0.51
SSR4P1-202ENST00000429427 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.87□□□□□ -0.51
SSR4P1-202ENST00000429427 HIGD1CA8MV81 97 aa11.87□□□□□ -0.51
SSR4P1-202ENST00000429427 Q0VG73 95 aa11.87□□□□□ -0.51
SSR4P1-202ENST00000429427 KRTAP26-1Q6PEX3 210 aa11.87□□□□□ -0.51
SSR4P1-202ENST00000429427 CLPSL2Q6UWE3 100 aa11.87□□□□□ -0.51
SSR4P1-202ENST00000429427 ISOC2Q96AB3 205 aa11.87□□□□□ -0.51
SSR4P1-202ENST00000429427 GFRA4Q9GZZ7 299 aa11.87□□□□□ -0.51
SSR4P1-202ENST00000429427 RPL23P62829 140 aaKnown RBP11.86□□□□□ -0.51
SSR4P1-202ENST00000429427 LINC00269Q8N2A0 174 aa11.86□□□□□ -0.51
SSR4P1-202ENST00000429427 C20orf203Q8NBC4 194 aa11.86□□□□□ -0.51
SSR4P1-202ENST00000429427 VPS13BQ7Z7G8 4022 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms