RNA–Protein interactions for RNA: ENST00000428680.6

CNOT4-206, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 4,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-206ENST00000428680 LAMTOR2Q9Y2Q5 125 aa5.5□□□□□ -1.53
CNOT4-206ENST00000428680 TEP1Q99973 2627 aaKnown RBP5.5□□□□□ -1.53
CNOT4-206ENST00000428680 IGKCP01834 107 aa5.5□□□□□ -1.53
CNOT4-206ENST00000428680 NMBP08949 121 aa5.5□□□□□ -1.53
CNOT4-206ENST00000428680 HERVK_113P63121 156 aa5.5□□□□□ -1.53
CNOT4-206ENST00000428680 FAM19A2Q8N3H0 131 aa5.5□□□□□ -1.53
CNOT4-206ENST00000428680 PMCHL2Q9BQD1 86 aa5.5□□□□□ -1.53
CNOT4-206ENST00000428680 IGHV4-28A0A0C4DH34 117 aa5.49□□□□□ -1.53
CNOT4-206ENST00000428680 CHAC1Q9BUX1 264 aa5.49□□□□□ -1.53
CNOT4-206ENST00000428680 A0A0J9YX75 114 aa5.49□□□□□ -1.53
CNOT4-206ENST00000428680 NANOS2P60321 138 aaKnown RBP5.49□□□□□ -1.53
CNOT4-206ENST00000428680 C1orf147Q96MC9 270 aaPredicted RBP5.49□□□□□ -1.53
CNOT4-206ENST00000428680 MDFIQ99750 246 aa5.49□□□□□ -1.53
CNOT4-206ENST00000428680 SCRT2Q9NQ03 307 aa5.49□□□□□ -1.53
CNOT4-206ENST00000428680 A0A1B0GV72 72 aa5.49□□□□□ -1.53
CNOT4-206ENST00000428680 SNAI2O43623 268 aa5.49□□□□□ -1.53
CNOT4-206ENST00000428680 IGLV3-1P01715 115 aa5.49□□□□□ -1.53
CNOT4-206ENST00000428680 DNAJC30Q96LL9 226 aa5.49□□□□□ -1.53
CNOT4-206ENST00000428680 TRBV7-3A0A075B6L6 115 aa5.49□□□□□ -1.53
CNOT4-206ENST00000428680 SPATA45Q537H7 98 aa5.49□□□□□ -1.53
CNOT4-206ENST00000428680 Q8N1Y9 231 aa5.49□□□□□ -1.53
CNOT4-206ENST00000428680 KRTAP27-1Q3LI81 207 aa5.48□□□□□ -1.53
CNOT4-206ENST00000428680 KPRPQ5T749 579 aaPredicted RBP5.48□□□□□ -1.53
CNOT4-206ENST00000428680 SUMO4Q6EEV6 95 aa5.48□□□□□ -1.53
CNOT4-206ENST00000428680 LYPD6Q86Y78 171 aa5.48□□□□□ -1.53
CNOT4-206ENST00000428680 UNC79Q9P2D8 2635 aa5.48□□□□□ -1.53
CNOT4-206ENST00000428680 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.48□□□□□ -1.53
CNOT4-206ENST00000428680 IGKV2-29A2NJV5 120 aaPredicted RBP5.48□□□□□ -1.53
CNOT4-206ENST00000428680 RNF222A6NCQ9 220 aa5.48□□□□□ -1.53
CNOT4-206ENST00000428680 SPAG11BQ08648 103 aa5.48□□□□□ -1.53
CNOT4-206ENST00000428680 FGF23Q9GZV9 251 aaPredicted RBP5.48□□□□□ -1.53
CNOT4-206ENST00000428680 TMEM213A2RRL7 107 aa5.48□□□□□ -1.53
CNOT4-206ENST00000428680 RBAKDNA6NC62 111 aa5.47□□□□□ -1.53
CNOT4-206ENST00000428680 TEX22C9J3V5 150 aa5.47□□□□□ -1.53
CNOT4-206ENST00000428680 SFTA2Q6UW10 78 aa5.47□□□□□ -1.53
CNOT4-206ENST00000428680 BOD1L2Q8IYS8 172 aa5.47□□□□□ -1.53
CNOT4-206ENST00000428680 C17orf77Q96MU5 243 aa5.47□□□□□ -1.53
CNOT4-206ENST00000428680 A8MWP6 167 aa5.47□□□□□ -1.53
CNOT4-206ENST00000428680 RNASE13Q5GAN3 156 aaKnown RBP5.47□□□□□ -1.53
CNOT4-206ENST00000428680 C1orf134Q5TEV5 83 aa5.47□□□□□ -1.53
CNOT4-206ENST00000428680 TMEM141Q96I45 108 aa5.47□□□□□ -1.53
CNOT4-206ENST00000428680 WFDC1Q9HC57 220 aa5.47□□□□□ -1.53
CNOT4-206ENST00000428680 PRSS46E5RG02 174 aa5.47□□□□□ -1.53
CNOT4-206ENST00000428680 IFITM3Q01628 133 aa5.47□□□□□ -1.53
CNOT4-206ENST00000428680 C9orf85Q96MD7 179 aa5.47□□□□□ -1.53
CNOT4-206ENST00000428680 B9D2Q9BPU9 175 aa5.47□□□□□ -1.53
CNOT4-206ENST00000428680 ZNF580Q9UK33 172 aa5.47□□□□□ -1.53
CNOT4-206ENST00000428680 ARHGAP32A7KAX9 2087 aa5.47□□□□□ -1.53
CNOT4-206ENST00000428680 DMXL1Q9Y485 3027 aa5.46□□□□□ -1.53
CNOT4-206ENST00000428680 Q6ZTI0 123 aa5.46□□□□□ -1.53
CNOT4-206ENST00000428680 DEFB105AQ8NG35 78 aa5.46□□□□□ -1.53
CNOT4-206ENST00000428680 WWC2-AS2Q96NR7 200 aa5.46□□□□□ -1.53
CNOT4-206ENST00000428680 ERG28Q9UKR5 140 aa5.46□□□□□ -1.53
CNOT4-206ENST00000428680 DEFB1P60022 68 aa5.46□□□□□ -1.54
CNOT4-206ENST00000428680 LBHQ53QV2 105 aaPredicted RBP5.46□□□□□ -1.54
CNOT4-206ENST00000428680 LINC00322Q6ZN03 302 aaPredicted RBP5.46□□□□□ -1.54
CNOT4-206ENST00000428680 LINC00518Q8N0U6 118 aa5.46□□□□□ -1.54
CNOT4-206ENST00000428680 NUP35Q8NFH5 326 aa5.46□□□□□ -1.54
CNOT4-206ENST00000428680 UBE2D4Q9Y2X8 147 aa5.46□□□□□ -1.54
CNOT4-206ENST00000428680 G3V4G9 280 aa5.46□□□□□ -1.54
CNOT4-206ENST00000428680 CD300CQ08708 224 aa5.46□□□□□ -1.54
CNOT4-206ENST00000428680 TRAV26-2A0A0B4J265 109 aa5.46□□□□□ -1.54
CNOT4-206ENST00000428680 TRAV4A0A0B4J268 109 aa5.46□□□□□ -1.54
CNOT4-206ENST00000428680 K7EQG2 157 aa5.46□□□□□ -1.54
CNOT4-206ENST00000428680 C9orf153Q5TBE3 101 aa5.46□□□□□ -1.54
CNOT4-206ENST00000428680 UQCR10Q9UDW1 63 aa5.46□□□□□ -1.54
CNOT4-206ENST00000428680 BRI3O95415 125 aa5.45□□□□□ -1.54
CNOT4-206ENST00000428680 PSMB8P28062 276 aa5.45□□□□□ -1.54
CNOT4-206ENST00000428680 WFDC10AQ9H1F0 79 aa5.45□□□□□ -1.54
CNOT4-206ENST00000428680 LECT2O14960 151 aa5.45□□□□□ -1.54
CNOT4-206ENST00000428680 ATXN8Q156A1 80 aa5.45□□□□□ -1.54
CNOT4-206ENST00000428680 HIGD2BQ4VC39 106 aa5.45□□□□□ -1.54
CNOT4-206ENST00000428680 LYPD6BQ8NI32 183 aa5.45□□□□□ -1.54
CNOT4-206ENST00000428680 CHCHD1Q96BP2 118 aaKnown RBP5.45□□□□□ -1.54
CNOT4-206ENST00000428680 TRBV10-1A0A0K0K1A3 114 aa5.45□□□□□ -1.54
CNOT4-206ENST00000428680 OVOL2Q9BRP0 275 aa5.45□□□□□ -1.54
CNOT4-206ENST00000428680 HIGD2AQ9BW72 106 aa5.45□□□□□ -1.54
CNOT4-206ENST00000428680 GNB1LQ9BYB4 327 aa5.45□□□□□ -1.54
CNOT4-206ENST00000428680 GTSF1LQ9H1H1 148 aa5.45□□□□□ -1.54
CNOT4-206ENST00000428680 RETNQ9HD89 108 aa5.45□□□□□ -1.54
CNOT4-206ENST00000428680 NDUFA12Q9UI09 145 aa5.45□□□□□ -1.54
CNOT4-206ENST00000428680 NDUFS5O43920 106 aa5.44□□□□□ -1.54
CNOT4-206ENST00000428680 LINC01551Q86U37 167 aa5.44□□□□□ -1.54
CNOT4-206ENST00000428680 TRAV1-1A0A0B4J248 108 aa5.44□□□□□ -1.54
CNOT4-206ENST00000428680 FAM231BA6NCW3 169 aa5.44□□□□□ -1.54
CNOT4-206ENST00000428680 SERF1AO75920 110 aa5.44□□□□□ -1.54
CNOT4-206ENST00000428680 EBI3Q14213 229 aa5.44□□□□□ -1.54
CNOT4-206ENST00000428680 MAJINQ3KP22 176 aa5.44□□□□□ -1.54
CNOT4-206ENST00000428680 CITED1Q99966 193 aa5.44□□□□□ -1.54
CNOT4-206ENST00000428680 CFAP46Q8IYW2 2715 aa5.44□□□□□ -1.54
CNOT4-206ENST00000428680 GAGE12HA6NDE8 117 aa5.44□□□□□ -1.54
CNOT4-206ENST00000428680 TYMSP04818 313 aa5.44□□□□□ -1.54
CNOT4-206ENST00000428680 FGF6P10767 208 aa5.44□□□□□ -1.54
CNOT4-206ENST00000428680 FAM104BQ5XKR9 115 aa5.44□□□□□ -1.54
CNOT4-206ENST00000428680 CCDC140Q96MF4 163 aa5.44□□□□□ -1.54
CNOT4-206ENST00000428680 GFRA4Q9GZZ7 299 aa5.44□□□□□ -1.54
CNOT4-206ENST00000428680 SPANXA1Q9NS26 97 aa5.44□□□□□ -1.54
CNOT4-206ENST00000428680 TANC2Q9HCD6 1990 aa5.44□□□□□ -1.54
CNOT4-206ENST00000428680 SLC25A29Q8N8R3 303 aa5.44□□□□□ -1.54
CNOT4-206ENST00000428680 C18orf65Q6ZTR6 163 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 290.6 ms