RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 C10orf126Q8N4M7 172 aa8.15□□□□□ -1.1
TCOF1-204ENST00000427724 TRBV25-1A0A075B6N4 114 aa8.15□□□□□ -1.1
TCOF1-204ENST00000427724 TNFRSF6BO95407 300 aa8.15□□□□□ -1.1
TCOF1-204ENST00000427724 C12orf74Q32Q52 190 aa8.15□□□□□ -1.1
TCOF1-204ENST00000427724 UNQ9165/PRO28630Q6UXU0 137 aa8.15□□□□□ -1.1
TCOF1-204ENST00000427724 FOXI2Q6ZQN5 318 aa8.15□□□□□ -1.1
TCOF1-204ENST00000427724 COL6A5A8TX70 2615 aa8.15□□□□□ -1.1
TCOF1-204ENST00000427724 LAGE3Q14657 143 aa8.15□□□□□ -1.11
TCOF1-204ENST00000427724 GPHB5Q86YW7 130 aa8.15□□□□□ -1.11
TCOF1-204ENST00000427724 TRBV20-1A0A075B6N2 111 aa8.15□□□□□ -1.11
TCOF1-204ENST00000427724 IGHV3-64A0A075B6Q5 118 aa8.15□□□□□ -1.11
TCOF1-204ENST00000427724 TRAV2A0A0B4J234 112 aa8.15□□□□□ -1.11
TCOF1-204ENST00000427724 TMEM89A2RUT3 159 aa8.15□□□□□ -1.11
TCOF1-204ENST00000427724 C9JAW5 83 aa8.15□□□□□ -1.11
TCOF1-204ENST00000427724 I3L2K1 104 aa8.15□□□□□ -1.11
TCOF1-204ENST00000427724 SCGB1A1P11684 91 aa8.15□□□□□ -1.11
TCOF1-204ENST00000427724 KLF12Q9Y4X4 402 aa8.14□□□□□ -1.11
TCOF1-204ENST00000427724 SIVA1O15304 175 aa8.14□□□□□ -1.11
TCOF1-204ENST00000427724 SPRY2O43597 315 aa8.14□□□□□ -1.11
TCOF1-204ENST00000427724 FSTL3O95633 263 aa8.14□□□□□ -1.11
TCOF1-204ENST00000427724 BOD1L2Q8IYS8 172 aa8.14□□□□□ -1.11
TCOF1-204ENST00000427724 C11orf68Q9H3H3 251 aaKnown RBP8.14□□□□□ -1.11
TCOF1-204ENST00000427724 MAP1AP78559 2803 aaPredicted RBP8.13□□□□□ -1.11
TCOF1-204ENST00000427724 F8W735 103 aaPredicted RBP8.13□□□□□ -1.11
TCOF1-204ENST00000427724 EGR2P11161 476 aaPredicted RBP8.13□□□□□ -1.11
TCOF1-204ENST00000427724 ZNF702PQ9H963 129 aa8.13□□□□□ -1.11
TCOF1-204ENST00000427724 GCN1Q92616 2671 aaKnown RBP8.13□□□□□ -1.11
TCOF1-204ENST00000427724 TEX22C9J3V5 150 aa8.13□□□□□ -1.11
TCOF1-204ENST00000427724 DEFB1P60022 68 aa8.13□□□□□ -1.11
TCOF1-204ENST00000427724 SMIM20Q8N5G0 67 aa8.13□□□□□ -1.11
TCOF1-204ENST00000427724 TRAV8-4A0A0B4J246 113 aa8.13□□□□□ -1.11
TCOF1-204ENST00000427724 ATP5G1P05496 136 aa8.13□□□□□ -1.11
TCOF1-204ENST00000427724 TRAV26-2A0A0B4J265 109 aa8.12□□□□□ -1.11
TCOF1-204ENST00000427724 VWC2LB2RUY7 222 aa8.12□□□□□ -1.11
TCOF1-204ENST00000427724 PPDPFLQ8WWR9 84 aa8.12□□□□□ -1.11
TCOF1-204ENST00000427724 C20orf78Q9BR46 151 aa8.12□□□□□ -1.11
TCOF1-204ENST00000427724 INS-IGF2F8WCM5 200 aa8.12□□□□□ -1.11
TCOF1-204ENST00000427724 PLNP26678 52 aa8.12□□□□□ -1.11
TCOF1-204ENST00000427724 OR13C6PQ8NH95 151 aa8.12□□□□□ -1.11
TCOF1-204ENST00000427724 C11orf45Q8TAV5 145 aa8.12□□□□□ -1.11
TCOF1-204ENST00000427724 MSRB1Q9NZV6 116 aa8.12□□□□□ -1.11
TCOF1-204ENST00000427724 COL4A2P08572 1712 aa8.12□□□□□ -1.11
TCOF1-204ENST00000427724 SPATA25Q9BR10 227 aa8.12□□□□□ -1.11
TCOF1-204ENST00000427724 LINC00574Q9H8X3 128 aa8.12□□□□□ -1.11
TCOF1-204ENST00000427724 CRYGCP07315 174 aa8.12□□□□□ -1.11
TCOF1-204ENST00000427724 C18orf65Q6ZTR6 163 aa8.12□□□□□ -1.11
TCOF1-204ENST00000427724 ZNRF2Q8NHG8 242 aa8.12□□□□□ -1.11
TCOF1-204ENST00000427724 TRAV25A0A0B4J276 109 aa8.11□□□□□ -1.11
TCOF1-204ENST00000427724 A0A1B0GXF2 115 aa8.11□□□□□ -1.11
TCOF1-204ENST00000427724 C19orf71A6NCJ1 209 aa8.11□□□□□ -1.11
TCOF1-204ENST00000427724 GATA1P15976 413 aaPredicted RBP8.11□□□□□ -1.11
TCOF1-204ENST00000427724 MORN3Q6PF18 240 aaPredicted RBP8.11□□□□□ -1.11
TCOF1-204ENST00000427724 RNF183Q96D59 192 aa8.11□□□□□ -1.11
TCOF1-204ENST00000427724 ERG28Q9UKR5 140 aa8.11□□□□□ -1.11
TCOF1-204ENST00000427724 TET2Q6N021 2002 aaPredicted RBP8.11□□□□□ -1.11
TCOF1-204ENST00000427724 PRSS29PA6NIE9 313 aa8.11□□□□□ -1.11
TCOF1-204ENST00000427724 IGF1P05019 195 aa8.11□□□□□ -1.11
TCOF1-204ENST00000427724 GAGE6Q13070 117 aa8.11□□□□□ -1.11
TCOF1-204ENST00000427724 ORMDL2Q53FV1 153 aa8.11□□□□□ -1.11
TCOF1-204ENST00000427724 U3KQE9 123 aa8.11□□□□□ -1.11
TCOF1-204ENST00000427724 FANCD2OSQ96PS1 177 aa8.1□□□□□ -1.11
TCOF1-204ENST00000427724 IGHV3-38A0A0C4DH36 116 aa8.1□□□□□ -1.11
TCOF1-204ENST00000427724 HLA-DRB4P13762 266 aa8.1□□□□□ -1.11
TCOF1-204ENST00000427724 MLST8Q9BVC4 326 aa8.1□□□□□ -1.11
TCOF1-204ENST00000427724 AGPAT4-IT1Q9H0P7 198 aa8.1□□□□□ -1.11
TCOF1-204ENST00000427724 HLA-DRB4X5D2U9 266 aa8.1□□□□□ -1.11
TCOF1-204ENST00000427724 TRAV13-1A0A0B4J241 112 aa8.1□□□□□ -1.11
TCOF1-204ENST00000427724 PTH2Q96A98 100 aa8.1□□□□□ -1.11
TCOF1-204ENST00000427724 A0A0U1RRA0 63 aa8.09□□□□□ -1.11
TCOF1-204ENST00000427724 C2orf91Q6ZV80 131 aa8.09□□□□□ -1.11
TCOF1-204ENST00000427724 RHODO00212 210 aa8.09□□□□□ -1.11
TCOF1-204ENST00000427724 TEX15Q9BXT5 2789 aa8.09□□□□□ -1.11
TCOF1-204ENST00000427724 IGKV2D-24A0A075B6R9 120 aa8.09□□□□□ -1.11
TCOF1-204ENST00000427724 K7EMT4 169 aa8.09□□□□□ -1.11
TCOF1-204ENST00000427724 NBEAL1Q6ZS30 2694 aa8.09□□□□□ -1.11
TCOF1-204ENST00000427724 NPC2P61916 151 aa8.09□□□□□ -1.12
TCOF1-204ENST00000427724 CITED1Q99966 193 aa8.09□□□□□ -1.12
TCOF1-204ENST00000427724 RELNP78509 3460 aa8.08□□□□□ -1.12
TCOF1-204ENST00000427724 BUB3O43684 328 aa8.08□□□□□ -1.12
TCOF1-204ENST00000427724 CIRBPQ14011 172 aaKnown RBP8.08□□□□□ -1.12
TCOF1-204ENST00000427724 NOTCH1P46531 2555 aa8.08□□□□□ -1.12
TCOF1-204ENST00000427724 IGSF10Q6WRI0 2623 aa8.08□□□□□ -1.12
TCOF1-204ENST00000427724 MYMXA0A1B0GTQ4 84 aa8.08□□□□□ -1.12
TCOF1-204ENST00000427724 ANGP03950 147 aaKnown RBP8.08□□□□□ -1.12
TCOF1-204ENST00000427724 DEFB114Q30KQ6 69 aa8.08□□□□□ -1.12
TCOF1-204ENST00000427724 LINC01559Q495D7 138 aa8.08□□□□□ -1.12
TCOF1-204ENST00000427724 C16orf54Q6UWD8 224 aa8.08□□□□□ -1.12
TCOF1-204ENST00000427724 SMG1Q96Q15 3661 aaKnown RBP8.08□□□□□ -1.12
TCOF1-204ENST00000427724 H3BMM0 161 aa8.07□□□□□ -1.12
TCOF1-204ENST00000427724 NEGR1Q7Z3B1 354 aa8.07□□□□□ -1.12
TCOF1-204ENST00000427724 UBE2WQ96B02 151 aa8.07□□□□□ -1.12
TCOF1-204ENST00000427724 PRAC2D3DTV9 90 aa8.07□□□□□ -1.12
TCOF1-204ENST00000427724 KRTAP24-1Q3LI83 254 aa8.07□□□□□ -1.12
TCOF1-204ENST00000427724 CLPSL2Q6UWE3 100 aa8.07□□□□□ -1.12
TCOF1-204ENST00000427724 ZNF493Q6ZR52 646 aa8.07□□□□□ -1.12
TCOF1-204ENST00000427724 NDUFA7O95182 113 aa8.07□□□□□ -1.12
TCOF1-204ENST00000427724 FOXI1Q12951 378 aa8.07□□□□□ -1.12
TCOF1-204ENST00000427724 C2orf82Q6UX34 121 aa8.07□□□□□ -1.12
TCOF1-204ENST00000427724 LY6G6CO95867 125 aa8.06□□□□□ -1.12
TCOF1-204ENST00000427724 Q8N8P6 123 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms