RNA–Protein interactions for RNA: ENST00000427449.1

HLA-DQB2-230, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

Gene HLA-DQB2, Length 721 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-230ENST00000427449 CTRLP40313 264 aa10.47□□□□□ -0.73
HLA-DQB2-230ENST00000427449 Q5VSD8 79 aa10.47□□□□□ -0.73
HLA-DQB2-230ENST00000427449 CNFNQ9BYD5 112 aa10.47□□□□□ -0.73
HLA-DQB2-230ENST00000427449 KLK12Q9UKR0 248 aa10.47□□□□□ -0.73
HLA-DQB2-230ENST00000427449 PKHD1L1Q86WI1 4243 aa10.47□□□□□ -0.73
HLA-DQB2-230ENST00000427449 SPANXN1Q5VSR9 72 aa10.46□□□□□ -0.73
HLA-DQB2-230ENST00000427449 EIF5AL1Q6IS14 154 aaKnown RBP10.46□□□□□ -0.73
HLA-DQB2-230ENST00000427449 FER1L6-AS1Q8NA97 138 aa10.46□□□□□ -0.73
HLA-DQB2-230ENST00000427449 OR2D3Q8NGH3 330 aa10.46□□□□□ -0.73
HLA-DQB2-230ENST00000427449 AP1S3Q96PC3 154 aa10.46□□□□□ -0.73
HLA-DQB2-230ENST00000427449 GNG4P50150 75 aa10.45□□□□□ -0.74
HLA-DQB2-230ENST00000427449 BAALCQ8WXS3 180 aa10.45□□□□□ -0.74
HLA-DQB2-230ENST00000427449 EPM2AB3EWF7 344 aa10.44□□□□□ -0.74
HLA-DQB2-230ENST00000427449 SUMO4Q6EEV6 95 aa10.44□□□□□ -0.74
HLA-DQB2-230ENST00000427449 AKAP14Q86UN6 197 aa10.44□□□□□ -0.74
HLA-DQB2-230ENST00000427449 NUDT10Q8NFP7 164 aa10.44□□□□□ -0.74
HLA-DQB2-230ENST00000427449 NUDT11Q96G61 164 aa10.44□□□□□ -0.74
HLA-DQB2-230ENST00000427449 TM2D2Q9BX73 214 aa10.44□□□□□ -0.74
HLA-DQB2-230ENST00000427449 PRR34Q9NV39 138 aa10.44□□□□□ -0.74
HLA-DQB2-230ENST00000427449 hCG_2014768A0A024R1R8 64 aa10.43□□□□□ -0.74
HLA-DQB2-230ENST00000427449 A0A1B0GVG6 124 aa10.43□□□□□ -0.74
HLA-DQB2-230ENST00000427449 SMR3BP02814 79 aaPredicted RBP10.43□□□□□ -0.74
HLA-DQB2-230ENST00000427449 SSTP61278 116 aa10.43□□□□□ -0.74
HLA-DQB2-230ENST00000427449 LINC01620Q4KN68 170 aa10.43□□□□□ -0.74
HLA-DQB2-230ENST00000427449 ALKAL2Q6UX46 152 aa10.43□□□□□ -0.74
HLA-DQB2-230ENST00000427449 Q8N976 141 aa10.43□□□□□ -0.74
HLA-DQB2-230ENST00000427449 MED9Q9NWA0 146 aa10.43□□□□□ -0.74
HLA-DQB2-230ENST00000427449 FLG2Q5D862 2391 aaPredicted RBP10.42□□□□□ -0.74
HLA-DQB2-230ENST00000427449 KRTAP10-4P60372 401 aaPredicted RBP10.42□□□□□ -0.74
HLA-DQB2-230ENST00000427449 RPS20P60866 119 aaKnown RBP10.42□□□□□ -0.74
HLA-DQB2-230ENST00000427449 TOR2AQ5JU69 321 aa10.42□□□□□ -0.74
HLA-DQB2-230ENST00000427449 LYZL1Q6UWQ5 148 aa10.42□□□□□ -0.74
HLA-DQB2-230ENST00000427449 OCC1Q8TAD7 63 aa10.42□□□□□ -0.74
HLA-DQB2-230ENST00000427449 GTSF1Q8WW33 167 aa10.42□□□□□ -0.74
HLA-DQB2-230ENST00000427449 UBE2WQ96B02 151 aa10.42□□□□□ -0.74
HLA-DQB2-230ENST00000427449 RNASE7Q9H1E1 156 aaKnown RBP10.42□□□□□ -0.74
HLA-DQB2-230ENST00000427449 IFNA1P01562 189 aa10.41□□□□□ -0.74
HLA-DQB2-230ENST00000427449 P01737 135 aa10.41□□□□□ -0.74
HLA-DQB2-230ENST00000427449 IQCJQ1A5X6 159 aa10.41□□□□□ -0.74
HLA-DQB2-230ENST00000427449 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.4□□□□□ -0.74
HLA-DQB2-230ENST00000427449 TEX46H3BTG2 121 aa10.4□□□□□ -0.74
HLA-DQB2-230ENST00000427449 NKX2-5P52952 324 aaPredicted RBP10.4□□□□□ -0.74
HLA-DQB2-230ENST00000427449 CACNG7P62955 275 aa10.4□□□□□ -0.74
HLA-DQB2-230ENST00000427449 GFRA4Q9GZZ7 299 aa10.4□□□□□ -0.74
HLA-DQB2-230ENST00000427449 IGKV2D-24A0A075B6R9 120 aa10.39□□□□□ -0.75
HLA-DQB2-230ENST00000427449 A0A087WX48 190 aa10.39□□□□□ -0.75
HLA-DQB2-230ENST00000427449 NTF3P20783 257 aa10.39□□□□□ -0.75
HLA-DQB2-230ENST00000427449 RBX1P62877 108 aa10.39□□□□□ -0.75
HLA-DQB2-230ENST00000427449 TPPP3Q9BW30 176 aa10.39□□□□□ -0.75
HLA-DQB2-230ENST00000427449 RPP21Q9H633 154 aaKnown RBP10.39□□□□□ -0.75
HLA-DQB2-230ENST00000427449 F2Z2F3 143 aa10.38□□□□□ -0.75
HLA-DQB2-230ENST00000427449 F5H697 171 aa10.38□□□□□ -0.75
HLA-DQB2-230ENST00000427449 TMEM250H0YL14 139 aa10.38□□□□□ -0.75
HLA-DQB2-230ENST00000427449 MGPP08493 103 aa10.38□□□□□ -0.75
HLA-DQB2-230ENST00000427449 TAGLN2P37802 199 aaKnown RBP10.38□□□□□ -0.75
HLA-DQB2-230ENST00000427449 WDR73Q6P4I2 378 aa10.38□□□□□ -0.75
HLA-DQB2-230ENST00000427449 C15orf54Q8N8G6 183 aa10.38□□□□□ -0.75
HLA-DQB2-230ENST00000427449 C20orf203Q8NBC4 194 aa10.38□□□□□ -0.75
HLA-DQB2-230ENST00000427449 COX11Q9Y6N1 276 aa10.38□□□□□ -0.75
HLA-DQB2-230ENST00000427449 URGCP-MRPS24S4R325 110 aa10.38□□□□□ -0.75
HLA-DQB2-230ENST00000427449 FOXA3P55318 350 aaPredicted RBP10.37□□□□□ -0.75
HLA-DQB2-230ENST00000427449 DAZAP1Q96EP5 407 aaKnown RBP10.37□□□□□ -0.75
HLA-DQB2-230ENST00000427449 DPH3P1Q9H4G8 78 aa10.37□□□□□ -0.75
HLA-DQB2-230ENST00000427449 LRP1Q07954 4544 aaKnown RBP10.36□□□□□ -0.75
HLA-DQB2-230ENST00000427449 RASL11AQ6T310 242 aa10.36□□□□□ -0.75
HLA-DQB2-230ENST00000427449 FAM231DQ6ZW35 169 aa10.36□□□□□ -0.75
HLA-DQB2-230ENST00000427449 SCXQ7RTU7 201 aa10.36□□□□□ -0.75
HLA-DQB2-230ENST00000427449 GATD1Q8NB37 220 aa10.36□□□□□ -0.75
HLA-DQB2-230ENST00000427449 RMI2Q96E14 147 aa10.36□□□□□ -0.75
HLA-DQB2-230ENST00000427449 PGLYRP4Q96LB8 373 aa10.36□□□□□ -0.75
HLA-DQB2-230ENST00000427449 CHCHD5Q9BSY4 110 aa10.36□□□□□ -0.75
HLA-DQB2-230ENST00000427449 FAT3Q8TDW7 4589 aa10.35□□□□□ -0.75
HLA-DQB2-230ENST00000427449 IGLV4-60A0A075B6I1 120 aa10.35□□□□□ -0.75
HLA-DQB2-230ENST00000427449 NDUFS6O75380 124 aaKnown RBP10.35□□□□□ -0.75
HLA-DQB2-230ENST00000427449 ANGP03950 147 aaKnown RBP10.35□□□□□ -0.75
HLA-DQB2-230ENST00000427449 SMIM17P0DL12 118 aa10.35□□□□□ -0.75
HLA-DQB2-230ENST00000427449 INAFM2P0DMQ5 153 aa10.35□□□□□ -0.75
HLA-DQB2-230ENST00000427449 Q0VG73 95 aa10.35□□□□□ -0.75
HLA-DQB2-230ENST00000427449 GAGE6Q13070 117 aa10.35□□□□□ -0.75
HLA-DQB2-230ENST00000427449 ELOBQ15370 118 aa10.35□□□□□ -0.75
HLA-DQB2-230ENST00000427449 TMEM97Q5BJF2 176 aa10.35□□□□□ -0.75
HLA-DQB2-230ENST00000427449 CLPSL2Q6UWE3 100 aa10.35□□□□□ -0.75
HLA-DQB2-230ENST00000427449 FRZBQ92765 325 aa10.35□□□□□ -0.75
HLA-DQB2-230ENST00000427449 DMBT1Q9UGM3 2413 aaPredicted RBP10.35□□□□□ -0.75
HLA-DQB2-230ENST00000427449 TRBV25-1A0A075B6N4 114 aa10.34□□□□□ -0.75
HLA-DQB2-230ENST00000427449 TRAV26-2A0A0B4J265 109 aa10.34□□□□□ -0.75
HLA-DQB2-230ENST00000427449 GAS8-AS1O95177 125 aa10.34□□□□□ -0.75
HLA-DQB2-230ENST00000427449 TRGC1P0CF51 173 aa10.34□□□□□ -0.75
HLA-DQB2-230ENST00000427449 DEFB104AQ8WTQ1 72 aa10.34□□□□□ -0.75
HLA-DQB2-230ENST00000427449 NIT2Q9NQR4 276 aa10.34□□□□□ -0.75
HLA-DQB2-230ENST00000427449 BIN3Q9NQY0 253 aa10.34□□□□□ -0.75
HLA-DQB2-230ENST00000427449 IGHV1-24A0A0C4DH33 117 aa10.33□□□□□ -0.76
HLA-DQB2-230ENST00000427449 XKRY2A2RUG3 117 aa10.33□□□□□ -0.76
HLA-DQB2-230ENST00000427449 USP17L23D6RBM5 183 aa10.33□□□□□ -0.76
HLA-DQB2-230ENST00000427449 PRSS1P07477 247 aa10.33□□□□□ -0.76
HLA-DQB2-230ENST00000427449 BLOC1S1P78537 153 aa10.33□□□□□ -0.76
HLA-DQB2-230ENST00000427449 MIAQ16674 131 aa10.33□□□□□ -0.76
HLA-DQB2-230ENST00000427449 LINC00269Q8N2A0 174 aa10.33□□□□□ -0.76
HLA-DQB2-230ENST00000427449 RPL39LQ96EH5 51 aaKnown RBP10.33□□□□□ -0.76
HLA-DQB2-230ENST00000427449 FAM210AQ96ND0 272 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 187.1 ms