RNA–Protein interactions for RNA: ENST00000426280.3

GPC1-204, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-204ENST00000426280 BTF3P20290 206 aaKnown RBP8.58□□□□□ -1.04
GPC1-204ENST00000426280 FOXA3P55318 350 aaPredicted RBP8.58□□□□□ -1.04
GPC1-204ENST00000426280 ZNF56Q15929 161 aa8.58□□□□□ -1.04
GPC1-204ENST00000426280 WDR73Q6P4I2 378 aa8.58□□□□□ -1.04
GPC1-204ENST00000426280 NUP35Q8NFH5 326 aa8.58□□□□□ -1.04
GPC1-204ENST00000426280 PRADC1Q9BSG0 188 aa8.58□□□□□ -1.04
GPC1-204ENST00000426280 F5H697 171 aa8.57□□□□□ -1.04
GPC1-204ENST00000426280 SMIM17P0DL12 118 aa8.57□□□□□ -1.04
GPC1-204ENST00000426280 TIRAPP58753 221 aa8.57□□□□□ -1.04
GPC1-204ENST00000426280 PNRC1Q12796 327 aaPredicted RBP8.57□□□□□ -1.04
GPC1-204ENST00000426280 ATP6V0E2Q8NHE4 81 aa8.57□□□□□ -1.04
GPC1-204ENST00000426280 GFRA4Q9GZZ7 299 aa8.57□□□□□ -1.04
GPC1-204ENST00000426280 PCLOQ9Y6V0 5065 aa8.57□□□□□ -1.04
GPC1-204ENST00000426280 SMIM27A0A1W2PRY6 76 aa8.56□□□□□ -1.04
GPC1-204ENST00000426280 IGHV3-30P01768 117 aa8.56□□□□□ -1.04
GPC1-204ENST00000426280 IGHV3-33P01772 117 aa8.56□□□□□ -1.04
GPC1-204ENST00000426280 TRGC1P0CF51 173 aa8.56□□□□□ -1.04
GPC1-204ENST00000426280 IGHV3-30-3P0DP02 117 aa8.56□□□□□ -1.04
GPC1-204ENST00000426280 IGHV3-30-5P0DP03 117 aa8.56□□□□□ -1.04
GPC1-204ENST00000426280 RAB4BP61018 213 aa8.56□□□□□ -1.04
GPC1-204ENST00000426280 GTSF1LQ9H1H1 148 aa8.56□□□□□ -1.04
GPC1-204ENST00000426280 DNAH5Q8TE73 4624 aa8.56□□□□□ -1.04
GPC1-204ENST00000426280 A0A087WTM6 91 aa8.55□□□□□ -1.04
GPC1-204ENST00000426280 IGHV3-38A0A0C4DH36 116 aa8.55□□□□□ -1.04
GPC1-204ENST00000426280 A0A1B0GUT8 65 aa8.55□□□□□ -1.04
GPC1-204ENST00000426280 FAM231BA6NCW3 169 aa8.55□□□□□ -1.04
GPC1-204ENST00000426280 OR10J3Q5JRS4 329 aa8.55□□□□□ -1.04
GPC1-204ENST00000426280 SUMO4Q6EEV6 95 aa8.55□□□□□ -1.04
GPC1-204ENST00000426280 SEC11CQ9BY50 192 aa8.55□□□□□ -1.04
GPC1-204ENST00000426280 DPH3P1Q9H4G8 78 aa8.55□□□□□ -1.04
GPC1-204ENST00000426280 HSPG2P98160 4391 aa8.55□□□□□ -1.04
GPC1-204ENST00000426280 LELP1Q5T871 98 aa8.54□□□□□ -1.04
GPC1-204ENST00000426280 SH2D6Q7Z4S9 175 aa8.54□□□□□ -1.04
GPC1-204ENST00000426280 BORCS7Q96B45 105 aa8.54□□□□□ -1.04
GPC1-204ENST00000426280 DNAJC30Q96LL9 226 aa8.54□□□□□ -1.04
GPC1-204ENST00000426280 NAT8BQ9UHF3 227 aa8.54□□□□□ -1.04
GPC1-204ENST00000426280 APOBP04114 4563 aaKnown RBP8.54□□□□□ -1.04
GPC1-204ENST00000426280 TRAV9-2A0A087WT02 112 aa8.53□□□□□ -1.04
GPC1-204ENST00000426280 IBA57-AS1B1ANH7 110 aa8.53□□□□□ -1.04
GPC1-204ENST00000426280 MT-ND4LP03901 98 aa8.53□□□□□ -1.04
GPC1-204ENST00000426280 LINC01556Q5JQF7 62 aa8.53□□□□□ -1.04
GPC1-204ENST00000426280 C10orf91Q5T1B1 145 aa8.53□□□□□ -1.04
GPC1-204ENST00000426280 NEXN-AS1Q8NBZ9 246 aa8.53□□□□□ -1.04
GPC1-204ENST00000426280 TRAV8-6A0A0B4J262 113 aa8.52□□□□□ -1.05
GPC1-204ENST00000426280 TRAV26-2A0A0B4J265 109 aa8.52□□□□□ -1.05
GPC1-204ENST00000426280 M0QY20 66 aa8.52□□□□□ -1.05
GPC1-204ENST00000426280 PPP1R2P9O14990 202 aa8.52□□□□□ -1.05
GPC1-204ENST00000426280 RIGQ13278 110 aa8.52□□□□□ -1.05
GPC1-204ENST00000426280 MRPL54Q6P161 138 aaKnown RBP8.52□□□□□ -1.05
GPC1-204ENST00000426280 DAZ4Q86SG3 579 aaKnown RBP8.52□□□□□ -1.05
GPC1-204ENST00000426280 ANAPC16Q96DE5 110 aa8.52□□□□□ -1.05
GPC1-204ENST00000426280 DAZ3Q9NR90 486 aaKnown RBP8.52□□□□□ -1.05
GPC1-204ENST00000426280 ABCA13Q86UQ4 5058 aa8.52□□□□□ -1.05
GPC1-204ENST00000426280 TRBV7-3A0A075B6L6 115 aa8.51□□□□□ -1.05
GPC1-204ENST00000426280 TRBV10-1A0A0K0K1A3 114 aa8.51□□□□□ -1.05
GPC1-204ENST00000426280 LRCOL1A6NCL2 159 aa8.51□□□□□ -1.05
GPC1-204ENST00000426280 CAMPP49913 170 aa8.51□□□□□ -1.05
GPC1-204ENST00000426280 RPL36AP83881 106 aaKnown RBP8.51□□□□□ -1.05
GPC1-204ENST00000426280 SMIM15Q7Z3B0 74 aa8.51□□□□□ -1.05
GPC1-204ENST00000426280 SLC7A5P1Q8MH63 180 aa8.51□□□□□ -1.05
GPC1-204ENST00000426280 GATD1Q8NB37 220 aa8.51□□□□□ -1.05
GPC1-204ENST00000426280 RPL36ALQ969Q0 106 aaKnown RBP8.51□□□□□ -1.05
GPC1-204ENST00000426280 Q9HAA7 133 aa8.51□□□□□ -1.05
GPC1-204ENST00000426280 CARHSP1Q9Y2V2 147 aaKnown RBP8.51□□□□□ -1.05
GPC1-204ENST00000426280 CDK2AP2O75956 126 aa8.5□□□□□ -1.05
GPC1-204ENST00000426280 GAS8-AS1O95177 125 aa8.5□□□□□ -1.05
GPC1-204ENST00000426280 KRTAP10-1P60331 282 aa8.5□□□□□ -1.05
GPC1-204ENST00000426280 UBE2D3P61077 147 aa8.5□□□□□ -1.05
GPC1-204ENST00000426280 UBE2D2P62837 147 aa8.5□□□□□ -1.05
GPC1-204ENST00000426280 WFDC2Q14508 124 aa8.5□□□□□ -1.05
GPC1-204ENST00000426280 NFE4Q86UQ8 179 aa8.5□□□□□ -1.05
GPC1-204ENST00000426280 AMN1Q8IY45 258 aa8.5□□□□□ -1.05
GPC1-204ENST00000426280 MAPKAPK5-AS1Q8N8E1 139 aa8.5□□□□□ -1.05
GPC1-204ENST00000426280 RNF185Q96GF1 192 aa8.5□□□□□ -1.05
GPC1-204ENST00000426280 TMEM191AQ9H0A3 160 aa8.5□□□□□ -1.05
GPC1-204ENST00000426280 C7orf77A4D0Y5 90 aa8.49□□□□□ -1.05
GPC1-204ENST00000426280 RASL11AQ6T310 242 aa8.49□□□□□ -1.05
GPC1-204ENST00000426280 CLRN3Q8NCR9 226 aa8.49□□□□□ -1.05
GPC1-204ENST00000426280 RPL39LQ96EH5 51 aaKnown RBP8.49□□□□□ -1.05
GPC1-204ENST00000426280 A0A1B0GXF2 115 aa8.48□□□□□ -1.05
GPC1-204ENST00000426280 H7C1H1 209 aa8.48□□□□□ -1.05
GPC1-204ENST00000426280 K7EP13 123 aa8.48□□□□□ -1.05
GPC1-204ENST00000426280 APOC3P02656 99 aa8.48□□□□□ -1.05
GPC1-204ENST00000426280 RAB4AP20338 218 aa8.48□□□□□ -1.05
GPC1-204ENST00000426280 C10orf126Q8N4M7 172 aa8.48□□□□□ -1.05
GPC1-204ENST00000426280 DEFB104AQ8WTQ1 72 aa8.48□□□□□ -1.05
GPC1-204ENST00000426280 NIT2Q9NQR4 276 aa8.48□□□□□ -1.05
GPC1-204ENST00000426280 SMKR1H3BMG3 65 aa8.47□□□□□ -1.05
GPC1-204ENST00000426280 XGP55808 180 aa8.47□□□□□ -1.05
GPC1-204ENST00000426280 NTM-AS1Q6ZSK4 140 aa8.47□□□□□ -1.05
GPC1-204ENST00000426280 NIT1Q86X76 327 aa8.47□□□□□ -1.05
GPC1-204ENST00000426280 CTDSP1Q9GZU7 261 aa8.47□□□□□ -1.05
GPC1-204ENST00000426280 PGPEP1Q9NXJ5 209 aa8.47□□□□□ -1.05
GPC1-204ENST00000426280 NCR2O95944 276 aa8.46□□□□□ -1.06
GPC1-204ENST00000426280 RPS10P46783 165 aaKnown RBP8.46□□□□□ -1.06
GPC1-204ENST00000426280 HBBP68871 147 aa8.46□□□□□ -1.06
GPC1-204ENST00000426280 RPS10P5Q9NQ39 176 aa8.46□□□□□ -1.06
GPC1-204ENST00000426280 MRPL51Q4U2R6 128 aaKnown RBP8.45□□□□□ -1.06
GPC1-204ENST00000426280 FAM104BQ5XKR9 115 aa8.45□□□□□ -1.06
GPC1-204ENST00000426280 A0A1B0GW15 77 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms