RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 C18orf65Q6ZTR6 163 aa10.03□□□□□ -0.8
USP42-203ENST00000426246 GPHB5Q86YW7 130 aa10.03□□□□□ -0.8
USP42-203ENST00000426246 SMPXQ9UHP9 88 aa10.02□□□□□ -0.8
USP42-203ENST00000426246 G3V4G9 280 aa10.02□□□□□ -0.81
USP42-203ENST00000426246 VCX2Q9H322 139 aa10.02□□□□□ -0.81
USP42-203ENST00000426246 A0A1B0GV72 72 aa10.02□□□□□ -0.81
USP42-203ENST00000426246 NDUFA4O00483 81 aa10.02□□□□□ -0.81
USP42-203ENST00000426246 KRTAP1-3Q8IUG1 177 aa10.02□□□□□ -0.81
USP42-203ENST00000426246 Q9UF83 564 aa10.02□□□□□ -0.81
USP42-203ENST00000426246 SLURP1P55000 103 aa10.01□□□□□ -0.81
USP42-203ENST00000426246 TRAV8-3A0A0A6YYJ7 113 aa10.01□□□□□ -0.81
USP42-203ENST00000426246 FAM223BA6NKX1 122 aa10.01□□□□□ -0.81
USP42-203ENST00000426246 CFHR3Q02985 330 aa10.01□□□□□ -0.81
USP42-203ENST00000426246 UFSP1Q6NVU6 142 aa10.01□□□□□ -0.81
USP42-203ENST00000426246 FOXI2Q6ZQN5 318 aa10.01□□□□□ -0.81
USP42-203ENST00000426246 FAM223AQ8IWN6 122 aa10.01□□□□□ -0.81
USP42-203ENST00000426246 SYT8Q8NBV8 401 aa10.01□□□□□ -0.81
USP42-203ENST00000426246 SIGMAR1Q99720 223 aa10.01□□□□□ -0.81
USP42-203ENST00000426246 XCL2Q9UBD3 114 aa10.01□□□□□ -0.81
USP42-203ENST00000426246 CD28P10747 220 aa10.01□□□□□ -0.81
USP42-203ENST00000426246 MRAP2Q96G30 205 aa10.01□□□□□ -0.81
USP42-203ENST00000426246 ZNF48Q96MX3 618 aaPredicted RBP10.01□□□□□ -0.81
USP42-203ENST00000426246 SPAG8Q99932 426 aaPredicted RBP10.01□□□□□ -0.81
USP42-203ENST00000426246 IGLV2-18A0A075B6J9 118 aa10□□□□□ -0.81
USP42-203ENST00000426246 LINC01587Q99440 93 aa10□□□□□ -0.81
USP42-203ENST00000426246 ITPR2Q14571 2701 aa10□□□□□ -0.81
USP42-203ENST00000426246 RBAKDNA6NC62 111 aa10□□□□□ -0.81
USP42-203ENST00000426246 RRN3P1Q2M238 152 aa10□□□□□ -0.81
USP42-203ENST00000426246 DYNLRB2Q8TF09 96 aa10□□□□□ -0.81
USP42-203ENST00000426246 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10□□□□□ -0.81
USP42-203ENST00000426246 IGKV2-29A2NJV5 120 aaPredicted RBP10□□□□□ -0.81
USP42-203ENST00000426246 GAGE12HA6NDE8 117 aa10□□□□□ -0.81
USP42-203ENST00000426246 B4DSR2 109 aa10□□□□□ -0.81
USP42-203ENST00000426246 KLK9Q2XQG4 91 aa10□□□□□ -0.81
USP42-203ENST00000426246 PSMG3-AS1Q96PY0 264 aa10□□□□□ -0.81
USP42-203ENST00000426246 SIVA1O15304 175 aa9.99□□□□□ -0.81
USP42-203ENST00000426246 TMEM190Q8WZ59 177 aa9.99□□□□□ -0.81
USP42-203ENST00000426246 TMEM238LA0A1B0GVL6 79 aa9.99□□□□□ -0.81
USP42-203ENST00000426246 A6NJY4 79 aa9.99□□□□□ -0.81
USP42-203ENST00000426246 VCYO14598 125 aa9.99□□□□□ -0.81
USP42-203ENST00000426246 C9JAW5 83 aa9.99□□□□□ -0.81
USP42-203ENST00000426246 TRPT1Q86TN4 253 aaKnown RBP9.99□□□□□ -0.81
USP42-203ENST00000426246 TNFRSF18Q9Y5U5 241 aa9.99□□□□□ -0.81
USP42-203ENST00000426246 DEFB113Q30KQ7 82 aa9.98□□□□□ -0.81
USP42-203ENST00000426246 TCTEX1D4Q5JR98 221 aa9.98□□□□□ -0.81
USP42-203ENST00000426246 FLNBO75369 2602 aaKnown RBP9.98□□□□□ -0.81
USP42-203ENST00000426246 IGHV4OR15-8A0A075B7B6 117 aa9.97□□□□□ -0.81
USP42-203ENST00000426246 A0A087WW49 117 aa9.97□□□□□ -0.81
USP42-203ENST00000426246 PMVKQ15126 192 aa9.97□□□□□ -0.81
USP42-203ENST00000426246 LRRC75A-AS1Q8N1F1 130 aa9.97□□□□□ -0.81
USP42-203ENST00000426246 Q6ZSV7 163 aa9.97□□□□□ -0.81
USP42-203ENST00000426246 NEXN-AS1Q8NBZ9 246 aa9.97□□□□□ -0.81
USP42-203ENST00000426246 TOMM6Q96B49 74 aa9.97□□□□□ -0.81
USP42-203ENST00000426246 J3QQQ9 107 aa9.97□□□□□ -0.81
USP42-203ENST00000426246 HIST2H2BCQ6DN03 193 aa9.97□□□□□ -0.81
USP42-203ENST00000426246 TSPEAR-AS2P59090 65 aa9.96□□□□□ -0.81
USP42-203ENST00000426246 C19orf54Q5BKX5 351 aa9.96□□□□□ -0.81
USP42-203ENST00000426246 SPINK8P0C7L1 97 aa9.96□□□□□ -0.81
USP42-203ENST00000426246 LINC01356Q8N9X3 169 aa9.96□□□□□ -0.81
USP42-203ENST00000426246 CNFNQ9BYD5 112 aa9.96□□□□□ -0.81
USP42-203ENST00000426246 A4D1N5 150 aa9.96□□□□□ -0.82
USP42-203ENST00000426246 GATA3P23771 443 aa9.96□□□□□ -0.82
USP42-203ENST00000426246 HOXD3P31249 432 aaPredicted RBP9.96□□□□□ -0.82
USP42-203ENST00000426246 USMG5Q96IX5 58 aa9.96□□□□□ -0.82
USP42-203ENST00000426246 UNC79Q9P2D8 2635 aa9.95□□□□□ -0.82
USP42-203ENST00000426246 DLX4Q92988 240 aaPredicted RBP9.95□□□□□ -0.82
USP42-203ENST00000426246 TRAV13-1A0A0B4J241 112 aa9.95□□□□□ -0.82
USP42-203ENST00000426246 ZNRF2Q8NHG8 242 aa9.95□□□□□ -0.82
USP42-203ENST00000426246 ANK3Q12955 4377 aaKnown RBP9.95□□□□□ -0.82
USP42-203ENST00000426246 IGHG2P01859 326 aa9.95□□□□□ -0.82
USP42-203ENST00000426246 GEMIN7Q9H840 131 aaKnown RBP9.95□□□□□ -0.82
USP42-203ENST00000426246 IGHV1OR15-1A0A075B7D0 117 aa9.94□□□□□ -0.82
USP42-203ENST00000426246 E9PLD3 99 aa9.94□□□□□ -0.82
USP42-203ENST00000426246 J3QKU1 62 aa9.94□□□□□ -0.82
USP42-203ENST00000426246 FSHBP01225 129 aa9.94□□□□□ -0.82
USP42-203ENST00000426246 IGHV4-31P0DP07 118 aa9.94□□□□□ -0.82
USP42-203ENST00000426246 TOMM7Q9P0U1 55 aa9.94□□□□□ -0.82
USP42-203ENST00000426246 TM2D2Q9BX73 214 aa9.94□□□□□ -0.82
USP42-203ENST00000426246 A6NDX4 124 aa9.93□□□□□ -0.82
USP42-203ENST00000426246 TSPAN13O95857 204 aa9.93□□□□□ -0.82
USP42-203ENST00000426246 CRIP2P52943 208 aaPredicted RBP9.93□□□□□ -0.82
USP42-203ENST00000426246 C11orf68Q9H3H3 251 aaKnown RBP9.93□□□□□ -0.82
USP42-203ENST00000426246 SPANXB1Q9NS25 103 aaPredicted RBP9.93□□□□□ -0.82
USP42-203ENST00000426246 MUSTN1Q8IVN3 82 aa9.93□□□□□ -0.82
USP42-203ENST00000426246 HIGD1BQ9P298 99 aa9.93□□□□□ -0.82
USP42-203ENST00000426246 ATRQ13535 2644 aa9.92□□□□□ -0.82
USP42-203ENST00000426246 ZMAT4Q9H898 229 aa9.92□□□□□ -0.82
USP42-203ENST00000426246 TSHBP01222 138 aa9.92□□□□□ -0.82
USP42-203ENST00000426246 TRGV1A0A0A0MS02 117 aa9.92□□□□□ -0.82
USP42-203ENST00000426246 TCL1BO95988 128 aa9.92□□□□□ -0.82
USP42-203ENST00000426246 CRYGDP07320 174 aa9.91□□□□□ -0.82
USP42-203ENST00000426246 U3KQE9 123 aa9.91□□□□□ -0.82
USP42-203ENST00000426246 F8W1H4 67 aa9.91□□□□□ -0.82
USP42-203ENST00000426246 J3QLI3 93 aa9.91□□□□□ -0.82
USP42-203ENST00000426246 MORN3Q6PF18 240 aaPredicted RBP9.91□□□□□ -0.82
USP42-203ENST00000426246 ERG28Q9UKR5 140 aa9.91□□□□□ -0.82
USP42-203ENST00000426246 TRBV7-3A0A075B6L6 115 aa9.9□□□□□ -0.82
USP42-203ENST00000426246 A8MWV9 139 aa9.9□□□□□ -0.82
USP42-203ENST00000426246 NDUFA7O95182 113 aa9.9□□□□□ -0.83
USP42-203ENST00000426246 RPL35AP18077 110 aaKnown RBP9.9□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms