RNA–Protein interactions for RNA: ENST00000425815.5

SMARCAL1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 310 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-205ENST00000425815 LYZL1Q6UWQ5 148 aa12.17□□□□□ -0.46
SMARCAL1-205ENST00000425815 BIN3Q9NQY0 253 aa12.17□□□□□ -0.46
SMARCAL1-205ENST00000425815 FAT1Q14517 4588 aa12.16□□□□□ -0.46
SMARCAL1-205ENST00000425815 TRBV6-8A0A0A6YYG3 113 aa12.16□□□□□ -0.46
SMARCAL1-205ENST00000425815 TRAV8-3A0A0A6YYJ7 113 aa12.16□□□□□ -0.46
SMARCAL1-205ENST00000425815 CACNG7P62955 275 aa12.16□□□□□ -0.46
SMARCAL1-205ENST00000425815 NTM-AS1Q6ZSK4 140 aa12.16□□□□□ -0.46
SMARCAL1-205ENST00000425815 Q8N1X5 172 aa12.16□□□□□ -0.46
SMARCAL1-205ENST00000425815 Q8N814 137 aa12.16□□□□□ -0.46
SMARCAL1-205ENST00000425815 AP1S3Q96PC3 154 aa12.16□□□□□ -0.46
SMARCAL1-205ENST00000425815 RNASE7Q9H1E1 156 aaKnown RBP12.16□□□□□ -0.46
SMARCAL1-205ENST00000425815 F2Z2F3 143 aa12.15□□□□□ -0.46
SMARCAL1-205ENST00000425815 M0QY20 66 aa12.15□□□□□ -0.46
SMARCAL1-205ENST00000425815 SMIM17P0DL12 118 aa12.15□□□□□ -0.46
SMARCAL1-205ENST00000425815 TM2D2Q9BX73 214 aa12.15□□□□□ -0.46
SMARCAL1-205ENST00000425815 KLK12Q9UKR0 248 aa12.15□□□□□ -0.46
SMARCAL1-205ENST00000425815 XKRY2A2RUG3 117 aa12.14□□□□□ -0.47
SMARCAL1-205ENST00000425815 NTF3P20783 257 aa12.14□□□□□ -0.47
SMARCAL1-205ENST00000425815 GCSHP23434 173 aa12.14□□□□□ -0.47
SMARCAL1-205ENST00000425815 TMEM250H0YL14 139 aa12.13□□□□□ -0.47
SMARCAL1-205ENST00000425815 TOR2AQ5JU69 321 aa12.13□□□□□ -0.47
SMARCAL1-205ENST00000425815 SUMO4Q6EEV6 95 aa12.13□□□□□ -0.47
SMARCAL1-205ENST00000425815 WDR73Q6P4I2 378 aa12.13□□□□□ -0.47
SMARCAL1-205ENST00000425815 CHCHD7Q9BUK0 85 aa12.13□□□□□ -0.47
SMARCAL1-205ENST00000425815 RPP21Q9H633 154 aaKnown RBP12.13□□□□□ -0.47
SMARCAL1-205ENST00000425815 URGCP-MRPS24S4R325 110 aa12.13□□□□□ -0.47
SMARCAL1-205ENST00000425815 CTRLP40313 264 aa12.12□□□□□ -0.47
SMARCAL1-205ENST00000425815 NTN5Q8WTR8 489 aaPredicted RBP12.12□□□□□ -0.47
SMARCAL1-205ENST00000425815 CNFNQ9BYD5 112 aa12.12□□□□□ -0.47
SMARCAL1-205ENST00000425815 A0A087WX48 190 aa12.11□□□□□ -0.47
SMARCAL1-205ENST00000425815 IGLV5-52A0A0A0MRZ9 124 aa12.11□□□□□ -0.47
SMARCAL1-205ENST00000425815 TMEM262E9PQX1 116 aa12.11□□□□□ -0.47
SMARCAL1-205ENST00000425815 MGPP08493 103 aa12.11□□□□□ -0.47
SMARCAL1-205ENST00000425815 GTSF1Q8WW33 167 aa12.11□□□□□ -0.47
SMARCAL1-205ENST00000425815 BAALCQ8WXS3 180 aa12.11□□□□□ -0.47
SMARCAL1-205ENST00000425815 LECT2O14960 151 aa12.1□□□□□ -0.47
SMARCAL1-205ENST00000425815 MPV17L2Q567V2 206 aa12.1□□□□□ -0.47
SMARCAL1-205ENST00000425815 ATRAIDQ6UW56 229 aa12.1□□□□□ -0.47
SMARCAL1-205ENST00000425815 ENHOQ6UWT2 76 aa12.1□□□□□ -0.47
SMARCAL1-205ENST00000425815 UBE2WQ96B02 151 aa12.1□□□□□ -0.47
SMARCAL1-205ENST00000425815 DPH3P1Q9H4G8 78 aa12.09□□□□□ -0.47
SMARCAL1-205ENST00000425815 IGKV2D-24A0A075B6R9 120 aa12.08□□□□□ -0.48
SMARCAL1-205ENST00000425815 TRGC1P0CF51 173 aa12.08□□□□□ -0.48
SMARCAL1-205ENST00000425815 ELOBQ15370 118 aa12.08□□□□□ -0.48
SMARCAL1-205ENST00000425815 FAM231DQ6ZW35 169 aa12.08□□□□□ -0.48
SMARCAL1-205ENST00000425815 FAM210AQ96ND0 272 aa12.08□□□□□ -0.48
SMARCAL1-205ENST00000425815 COX11Q9Y6N1 276 aa12.08□□□□□ -0.48
SMARCAL1-205ENST00000425815 NDUFS6O75380 124 aaKnown RBP12.07□□□□□ -0.48
SMARCAL1-205ENST00000425815 SRP19P09132 144 aaKnown RBP12.07□□□□□ -0.48
SMARCAL1-205ENST00000425815 CEBPGP53567 150 aa12.07□□□□□ -0.48
SMARCAL1-205ENST00000425815 FOXA3P55318 350 aaPredicted RBP12.07□□□□□ -0.48
SMARCAL1-205ENST00000425815 TWIST1Q15672 202 aa12.07□□□□□ -0.48
SMARCAL1-205ENST00000425815 TMEM97Q5BJF2 176 aa12.07□□□□□ -0.48
SMARCAL1-205ENST00000425815 RASL11AQ6T310 242 aa12.07□□□□□ -0.48
SMARCAL1-205ENST00000425815 C15orf54Q8N8G6 183 aa12.07□□□□□ -0.48
SMARCAL1-205ENST00000425815 Q8N976 141 aa12.07□□□□□ -0.48
SMARCAL1-205ENST00000425815 CHCHD5Q9BSY4 110 aa12.07□□□□□ -0.48
SMARCAL1-205ENST00000425815 EIF5A2Q9GZV4 153 aaKnown RBP12.07□□□□□ -0.48
SMARCAL1-205ENST00000425815 H7C1H1 209 aa12.06□□□□□ -0.48
SMARCAL1-205ENST00000425815 GATCO43716 136 aaKnown RBP12.06□□□□□ -0.48
SMARCAL1-205ENST00000425815 IQCJQ1A5X6 159 aa12.06□□□□□ -0.48
SMARCAL1-205ENST00000425815 KCNIP4Q6PIL6 250 aa12.06□□□□□ -0.48
SMARCAL1-205ENST00000425815 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.06□□□□□ -0.48
SMARCAL1-205ENST00000425815 RMI2Q96E14 147 aa12.06□□□□□ -0.48
SMARCAL1-205ENST00000425815 FAM30AQ9NZY2 134 aa12.06□□□□□ -0.48
SMARCAL1-205ENST00000425815 Q0VG73 95 aa12.05□□□□□ -0.48
SMARCAL1-205ENST00000425815 GAGE6Q13070 117 aa12.05□□□□□ -0.48
SMARCAL1-205ENST00000425815 LINC01551Q86U37 167 aa12.05□□□□□ -0.48
SMARCAL1-205ENST00000425815 GATD1Q8NB37 220 aa12.05□□□□□ -0.48
SMARCAL1-205ENST00000425815 NIT2Q9NQR4 276 aa12.05□□□□□ -0.48
SMARCAL1-205ENST00000425815 RBX1P62877 108 aa12.04□□□□□ -0.48
SMARCAL1-205ENST00000425815 HAMPP81172 84 aa12.04□□□□□ -0.48
SMARCAL1-205ENST00000425815 DEFB104AQ8WTQ1 72 aa12.04□□□□□ -0.48
SMARCAL1-205ENST00000425815 VPS13BQ7Z7G8 4022 aa12.03□□□□□ -0.48
SMARCAL1-205ENST00000425815 TRBV25-1A0A075B6N4 114 aa12.03□□□□□ -0.48
SMARCAL1-205ENST00000425815 C9JQL5 133 aa12.03□□□□□ -0.48
SMARCAL1-205ENST00000425815 ANGP03950 147 aaKnown RBP12.03□□□□□ -0.48
SMARCAL1-205ENST00000425815 PGLYRP4Q96LB8 373 aa12.03□□□□□ -0.48
SMARCAL1-205ENST00000425815 SMIM7Q9BQ49 75 aa12.03□□□□□ -0.48
SMARCAL1-205ENST00000425815 PRR34Q9NV39 138 aa12.03□□□□□ -0.48
SMARCAL1-205ENST00000425815 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.02□□□□□ -0.49
SMARCAL1-205ENST00000425815 TRAV26-2A0A0B4J265 109 aa12.02□□□□□ -0.49
SMARCAL1-205ENST00000425815 IGHV1-24A0A0C4DH33 117 aa12.02□□□□□ -0.49
SMARCAL1-205ENST00000425815 A8MWL6 223 aa12.02□□□□□ -0.49
SMARCAL1-205ENST00000425815 CT83Q5H943 113 aa12.02□□□□□ -0.49
SMARCAL1-205ENST00000425815 TMEM70Q9BUB7 260 aa12.02□□□□□ -0.49
SMARCAL1-205ENST00000425815 ZNF727A8MUV8 499 aa12.01□□□□□ -0.49
SMARCAL1-205ENST00000425815 PKIAP61925 76 aa12.01□□□□□ -0.49
SMARCAL1-205ENST00000425815 KRTAP26-1Q6PEX3 210 aa12.01□□□□□ -0.49
SMARCAL1-205ENST00000425815 EPM2AB3EWF7 344 aa12□□□□□ -0.49
SMARCAL1-205ENST00000425815 SMR3BP02814 79 aaPredicted RBP12□□□□□ -0.49
SMARCAL1-205ENST00000425815 SRSF3P84103 164 aaKnown RBP12□□□□□ -0.49
SMARCAL1-205ENST00000425815 LINC00269Q8N2A0 174 aa12□□□□□ -0.49
SMARCAL1-205ENST00000425815 C20orf203Q8NBC4 194 aa12□□□□□ -0.49
SMARCAL1-205ENST00000425815 C1orf43Q9BWL3 253 aa12□□□□□ -0.49
SMARCAL1-205ENST00000425815 LINC01620Q4KN68 170 aa11.99□□□□□ -0.49
SMARCAL1-205ENST00000425815 TEX261Q6UWH6 196 aa11.99□□□□□ -0.49
SMARCAL1-205ENST00000425815 Q6ZSA8 131 aa11.99□□□□□ -0.49
SMARCAL1-205ENST00000425815 FRZBQ92765 325 aa11.99□□□□□ -0.49
SMARCAL1-205ENST00000425815 RPL39LQ96EH5 51 aaKnown RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms