RNA–Protein interactions for RNA: ENST00000425516.1

CHCHD3P1-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3 pseudogene 1, humanhuman

BASIC

Gene CHCHD3P1, Length 676 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3P1-201ENST00000425516 A0A1B0GXF2 115 aa4.89□□□□□ -1.63
CHCHD3P1-201ENST00000425516 APOC3P02656 99 aa4.89□□□□□ -1.63
CHCHD3P1-201ENST00000425516 TRGC1P0CF51 173 aa4.89□□□□□ -1.63
CHCHD3P1-201ENST00000425516 LINC00694P0DN24 101 aa4.89□□□□□ -1.63
CHCHD3P1-201ENST00000425516 FAM3BP58499 235 aaPredicted RBP4.89□□□□□ -1.63
CHCHD3P1-201ENST00000425516 RAB4BP61018 213 aa4.89□□□□□ -1.63
CHCHD3P1-201ENST00000425516 RHEBQ15382 184 aa4.89□□□□□ -1.63
CHCHD3P1-201ENST00000425516 TWIST1Q15672 202 aa4.89□□□□□ -1.63
CHCHD3P1-201ENST00000425516 FAM74A4Q5TZK3 123 aa4.89□□□□□ -1.63
CHCHD3P1-201ENST00000425516 GATD1Q8NB37 220 aa4.89□□□□□ -1.63
CHCHD3P1-201ENST00000425516 IMMP2LQ96T52 175 aa4.89□□□□□ -1.63
CHCHD3P1-201ENST00000425516 TMEM191AQ9H0A3 160 aa4.89□□□□□ -1.63
CHCHD3P1-201ENST00000425516 ALMS1Q8TCU4 4167 aa4.89□□□□□ -1.63
CHCHD3P1-201ENST00000425516 A0A1B0GW15 77 aa4.88□□□□□ -1.63
CHCHD3P1-201ENST00000425516 K7EQD1 137 aa4.88□□□□□ -1.63
CHCHD3P1-201ENST00000425516 M0QY20 66 aa4.88□□□□□ -1.63
CHCHD3P1-201ENST00000425516 NUDT3O95989 172 aa4.88□□□□□ -1.63
CHCHD3P1-201ENST00000425516 P0DMU3 169 aa4.88□□□□□ -1.63
CHCHD3P1-201ENST00000425516 FAM231AP0DMU4 169 aa4.88□□□□□ -1.63
CHCHD3P1-201ENST00000425516 FAM231CP0DMU5 169 aa4.88□□□□□ -1.63
CHCHD3P1-201ENST00000425516 GYPEP15421 78 aa4.88□□□□□ -1.63
CHCHD3P1-201ENST00000425516 RIGQ13278 110 aa4.88□□□□□ -1.63
CHCHD3P1-201ENST00000425516 RHOHQ15669 191 aa4.88□□□□□ -1.63
CHCHD3P1-201ENST00000425516 ATRAIDQ6UW56 229 aa4.88□□□□□ -1.63
CHCHD3P1-201ENST00000425516 SVBPQ8N300 66 aa4.88□□□□□ -1.63
CHCHD3P1-201ENST00000425516 RNF185Q96GF1 192 aa4.88□□□□□ -1.63
CHCHD3P1-201ENST00000425516 DPH3P1Q9H4G8 78 aa4.88□□□□□ -1.63
CHCHD3P1-201ENST00000425516 TRBV10-1A0A0K0K1A3 114 aa4.87□□□□□ -1.63
CHCHD3P1-201ENST00000425516 SNAPINO95295 136 aa4.87□□□□□ -1.63
CHCHD3P1-201ENST00000425516 SMIM17P0DL12 118 aa4.87□□□□□ -1.63
CHCHD3P1-201ENST00000425516 RAB4AP20338 218 aa4.87□□□□□ -1.63
CHCHD3P1-201ENST00000425516 ZNF56Q15929 161 aa4.87□□□□□ -1.63
CHCHD3P1-201ENST00000425516 MRPL23Q16540 153 aaKnown RBP4.87□□□□□ -1.63
CHCHD3P1-201ENST00000425516 ESRGQ1W209 222 aa4.87□□□□□ -1.63
CHCHD3P1-201ENST00000425516 LGALS9CQ6DKI2 356 aa4.87□□□□□ -1.63
CHCHD3P1-201ENST00000425516 SUMO4Q6EEV6 95 aa4.87□□□□□ -1.63
CHCHD3P1-201ENST00000425516 MRPL54Q6P161 138 aaKnown RBP4.87□□□□□ -1.63
CHCHD3P1-201ENST00000425516 ATP5L2Q7Z4Y8 100 aa4.87□□□□□ -1.63
CHCHD3P1-201ENST00000425516 NEXN-AS1Q8NBZ9 246 aa4.87□□□□□ -1.63
CHCHD3P1-201ENST00000425516 BORCS7Q96B45 105 aa4.87□□□□□ -1.63
CHCHD3P1-201ENST00000425516 PRADC1Q9BSG0 188 aa4.87□□□□□ -1.63
CHCHD3P1-201ENST00000425516 RPS10P5Q9NQ39 176 aa4.87□□□□□ -1.63
CHCHD3P1-201ENST00000425516 ICOSQ9Y6W8 199 aa4.87□□□□□ -1.63
CHCHD3P1-201ENST00000425516 KMT2AQ03164 3969 aa4.87□□□□□ -1.63
CHCHD3P1-201ENST00000425516 TRAV9-1A0A075B6T8 112 aa4.86□□□□□ -1.63
CHCHD3P1-201ENST00000425516 GAS8-AS1O95177 125 aa4.86□□□□□ -1.63
CHCHD3P1-201ENST00000425516 HBBP68871 147 aa4.86□□□□□ -1.63
CHCHD3P1-201ENST00000425516 FAM104BQ5XKR9 115 aa4.86□□□□□ -1.63
CHCHD3P1-201ENST00000425516 SMIM15Q7Z3B0 74 aa4.86□□□□□ -1.63
CHCHD3P1-201ENST00000425516 NEGR1Q7Z3B1 354 aa4.86□□□□□ -1.63
CHCHD3P1-201ENST00000425516 AMN1Q8IY45 258 aa4.86□□□□□ -1.63
CHCHD3P1-201ENST00000425516 LINC00476Q8WZB0 136 aa4.86□□□□□ -1.63
CHCHD3P1-201ENST00000425516 FRZBQ92765 325 aa4.86□□□□□ -1.63
CHCHD3P1-201ENST00000425516 BTF3L4Q96K17 158 aa4.86□□□□□ -1.63
CHCHD3P1-201ENST00000425516 DNAH6Q9C0G6 4158 aa4.85□□□□□ -1.63
CHCHD3P1-201ENST00000425516 TRBV7-3A0A075B6L6 115 aa4.85□□□□□ -1.63
CHCHD3P1-201ENST00000425516 TRAV26-2A0A0B4J265 109 aa4.85□□□□□ -1.63
CHCHD3P1-201ENST00000425516 GAGE12JA6NER3 117 aa4.85□□□□□ -1.63
CHCHD3P1-201ENST00000425516 F5H697 171 aa4.85□□□□□ -1.63
CHCHD3P1-201ENST00000425516 MGPP08493 103 aa4.85□□□□□ -1.63
CHCHD3P1-201ENST00000425516 CAMPP49913 170 aa4.85□□□□□ -1.63
CHCHD3P1-201ENST00000425516 TIRAPP58753 221 aa4.85□□□□□ -1.63
CHCHD3P1-201ENST00000425516 UBE2D3P61077 147 aa4.85□□□□□ -1.63
CHCHD3P1-201ENST00000425516 UBE2D2P62837 147 aa4.85□□□□□ -1.63
CHCHD3P1-201ENST00000425516 GAGE1Q13065 139 aa4.85□□□□□ -1.63
CHCHD3P1-201ENST00000425516 GAGE4Q13068 117 aa4.85□□□□□ -1.63
CHCHD3P1-201ENST00000425516 GAGE5Q13069 117 aa4.85□□□□□ -1.63
CHCHD3P1-201ENST00000425516 MRPL51Q4U2R6 128 aaKnown RBP4.85□□□□□ -1.63
CHCHD3P1-201ENST00000425516 GAGE13Q4V321 117 aa4.85□□□□□ -1.63
CHCHD3P1-201ENST00000425516 RASL11AQ6T310 242 aa4.85□□□□□ -1.63
CHCHD3P1-201ENST00000425516 LYPD5Q6UWN5 251 aa4.85□□□□□ -1.63
CHCHD3P1-201ENST00000425516 SH2D6Q7Z4S9 175 aa4.85□□□□□ -1.63
CHCHD3P1-201ENST00000425516 ZNRF2Q8NHG8 242 aa4.85□□□□□ -1.63
CHCHD3P1-201ENST00000425516 DNAJC30Q96LL9 226 aa4.85□□□□□ -1.63
CHCHD3P1-201ENST00000425516 YPEL4Q96NS1 127 aa4.85□□□□□ -1.63
CHCHD3P1-201ENST00000425516 NIT2Q9NQR4 276 aa4.85□□□□□ -1.63
CHCHD3P1-201ENST00000425516 LINC00588Q9Y4M8 146 aa4.85□□□□□ -1.63
CHCHD3P1-201ENST00000425516 SACSQ9NZJ4 4579 aa4.85□□□□□ -1.63
CHCHD3P1-201ENST00000425516 TRBV6-5A0A0K0K1A5 114 aa4.84□□□□□ -1.63
CHCHD3P1-201ENST00000425516 LCE6AA0A183 80 aa4.84□□□□□ -1.63
CHCHD3P1-201ENST00000425516 H7C1H1 209 aa4.84□□□□□ -1.63
CHCHD3P1-201ENST00000425516 S100A8P05109 93 aa4.84□□□□□ -1.63
CHCHD3P1-201ENST00000425516 SRIP30626 198 aa4.84□□□□□ -1.63
CHCHD3P1-201ENST00000425516 CCL18P55774 89 aa4.84□□□□□ -1.63
CHCHD3P1-201ENST00000425516 RPL36AP83881 106 aaKnown RBP4.84□□□□□ -1.63
CHCHD3P1-201ENST00000425516 ELOBQ15370 118 aa4.84□□□□□ -1.63
CHCHD3P1-201ENST00000425516 KCNIP4Q6PIL6 250 aa4.84□□□□□ -1.63
CHCHD3P1-201ENST00000425516 TMEM136Q6ZRR5 245 aa4.84□□□□□ -1.63
CHCHD3P1-201ENST00000425516 ATP6V0E2Q8NHE4 81 aa4.84□□□□□ -1.63
CHCHD3P1-201ENST00000425516 RPL36ALQ969Q0 106 aaKnown RBP4.84□□□□□ -1.63
CHCHD3P1-201ENST00000425516 RPL39LQ96EH5 51 aaKnown RBP4.84□□□□□ -1.63
CHCHD3P1-201ENST00000425516 MRAP2Q96G30 205 aa4.84□□□□□ -1.63
CHCHD3P1-201ENST00000425516 UPK3BQ9BT76 320 aa4.84□□□□□ -1.63
CHCHD3P1-201ENST00000425516 GTSF1LQ9H1H1 148 aa4.84□□□□□ -1.63
CHCHD3P1-201ENST00000425516 URGCP-MRPS24S4R325 110 aa4.84□□□□□ -1.63
CHCHD3P1-201ENST00000425516 TRBV24-1A0A075B6N3 115 aa4.83□□□□□ -1.64
CHCHD3P1-201ENST00000425516 SMKR1H3BMG3 65 aa4.83□□□□□ -1.64
CHCHD3P1-201ENST00000425516 S100PP25815 95 aa4.83□□□□□ -1.64
CHCHD3P1-201ENST00000425516 RPS10P46783 165 aaKnown RBP4.83□□□□□ -1.64
CHCHD3P1-201ENST00000425516 POLR2KP53803 58 aaKnown RBP4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms