RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 BIN3Q9NQY0 253 aa8.51□□□□□ -1.05
SGCE-203ENST00000425444 TRBV7-3A0A075B6L6 115 aa8.5□□□□□ -1.05
SGCE-203ENST00000425444 XKRY2A2RUG3 117 aa8.5□□□□□ -1.05
SGCE-203ENST00000425444 P01737 135 aa8.5□□□□□ -1.05
SGCE-203ENST00000425444 GZMBP10144 247 aa8.5□□□□□ -1.05
SGCE-203ENST00000425444 UBE2D3P61077 147 aa8.5□□□□□ -1.05
SGCE-203ENST00000425444 UBE2D2P62837 147 aa8.5□□□□□ -1.05
SGCE-203ENST00000425444 HAMPP81172 84 aa8.5□□□□□ -1.05
SGCE-203ENST00000425444 TOR2AQ5JU69 321 aa8.5□□□□□ -1.05
SGCE-203ENST00000425444 ALKAL2Q6UX46 152 aa8.5□□□□□ -1.05
SGCE-203ENST00000425444 DAZ4Q86SG3 579 aaKnown RBP8.5□□□□□ -1.05
SGCE-203ENST00000425444 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.5□□□□□ -1.05
SGCE-203ENST00000425444 FER1L6-AS1Q8NA97 138 aa8.5□□□□□ -1.05
SGCE-203ENST00000425444 TM2D2Q9BX73 214 aa8.5□□□□□ -1.05
SGCE-203ENST00000425444 DAZ3Q9NR90 486 aaKnown RBP8.5□□□□□ -1.05
SGCE-203ENST00000425444 A0A087WX48 190 aa8.49□□□□□ -1.05
SGCE-203ENST00000425444 TRAV8-3A0A0A6YYJ7 113 aa8.49□□□□□ -1.05
SGCE-203ENST00000425444 C19orf71A6NCJ1 209 aa8.49□□□□□ -1.05
SGCE-203ENST00000425444 RBFOX3A6NFN3 312 aa8.49□□□□□ -1.05
SGCE-203ENST00000425444 TRBV20OR9-2A0A075B6H5 130 aa8.48□□□□□ -1.05
SGCE-203ENST00000425444 IGLV5-52A0A0A0MRZ9 124 aa8.48□□□□□ -1.05
SGCE-203ENST00000425444 MGPP08493 103 aa8.48□□□□□ -1.05
SGCE-203ENST00000425444 IGLC6P0CF74 106 aa8.48□□□□□ -1.05
SGCE-203ENST00000425444 BLOC1S1P78537 153 aa8.48□□□□□ -1.05
SGCE-203ENST00000425444 NIT1Q86X76 327 aa8.48□□□□□ -1.05
SGCE-203ENST00000425444 NEXN-AS1Q8NBZ9 246 aa8.48□□□□□ -1.05
SGCE-203ENST00000425444 OR10G8Q8NGN5 311 aa8.48□□□□□ -1.05
SGCE-203ENST00000425444 LRCOL1A6NCL2 159 aa8.47□□□□□ -1.05
SGCE-203ENST00000425444 CACNG7P62955 275 aa8.47□□□□□ -1.05
SGCE-203ENST00000425444 Q8N814 137 aa8.47□□□□□ -1.05
SGCE-203ENST00000425444 PKHD1L1Q86WI1 4243 aa8.46□□□□□ -1.05
SGCE-203ENST00000425444 TRBV6-8A0A0A6YYG3 113 aa8.46□□□□□ -1.06
SGCE-203ENST00000425444 TMEM262E9PQX1 116 aa8.46□□□□□ -1.06
SGCE-203ENST00000425444 GCSHP23434 173 aa8.46□□□□□ -1.06
SGCE-203ENST00000425444 ELOBQ15370 118 aa8.46□□□□□ -1.06
SGCE-203ENST00000425444 NTN5Q8WTR8 489 aaPredicted RBP8.46□□□□□ -1.06
SGCE-203ENST00000425444 RMI2Q96E14 147 aa8.46□□□□□ -1.06
SGCE-203ENST00000425444 CHCHD7Q9BUK0 85 aa8.46□□□□□ -1.06
SGCE-203ENST00000425444 KLK12Q9UKR0 248 aa8.46□□□□□ -1.06
SGCE-203ENST00000425444 F2Z2F3 143 aa8.45□□□□□ -1.06
SGCE-203ENST00000425444 H7C1H1 209 aa8.45□□□□□ -1.06
SGCE-203ENST00000425444 TRGC1P0CF51 173 aa8.45□□□□□ -1.06
SGCE-203ENST00000425444 NKX2-5P52952 324 aaPredicted RBP8.45□□□□□ -1.06
SGCE-203ENST00000425444 CEBPGP53567 150 aa8.45□□□□□ -1.06
SGCE-203ENST00000425444 NUDT10Q8NFP7 164 aa8.45□□□□□ -1.06
SGCE-203ENST00000425444 UBE2WQ96B02 151 aa8.45□□□□□ -1.06
SGCE-203ENST00000425444 NUDT11Q96G61 164 aa8.45□□□□□ -1.06
SGCE-203ENST00000425444 COX11Q9Y6N1 276 aa8.45□□□□□ -1.06
SGCE-203ENST00000425444 KIF25-AS1Q9Y6Z4 181 aa8.45□□□□□ -1.06
SGCE-203ENST00000425444 LRP2P98164 4655 aa8.45□□□□□ -1.06
SGCE-203ENST00000425444 IGKV2D-24A0A075B6R9 120 aa8.44□□□□□ -1.06
SGCE-203ENST00000425444 LECT2O14960 151 aa8.44□□□□□ -1.06
SGCE-203ENST00000425444 TMEM97Q5BJF2 176 aa8.44□□□□□ -1.06
SGCE-203ENST00000425444 LYZL1Q6UWQ5 148 aa8.44□□□□□ -1.06
SGCE-203ENST00000425444 CHCHD5Q9BSY4 110 aa8.44□□□□□ -1.06
SGCE-203ENST00000425444 RNASE7Q9H1E1 156 aaKnown RBP8.44□□□□□ -1.06
SGCE-203ENST00000425444 RPP21Q9H633 154 aaKnown RBP8.44□□□□□ -1.06
SGCE-203ENST00000425444 TMEM250H0YL14 139 aa8.43□□□□□ -1.06
SGCE-203ENST00000425444 K7EN84 100 aa8.43□□□□□ -1.06
SGCE-203ENST00000425444 CRPP02741 224 aa8.43□□□□□ -1.06
SGCE-203ENST00000425444 PKIAP61925 76 aa8.43□□□□□ -1.06
SGCE-203ENST00000425444 SUMO4Q6EEV6 95 aa8.43□□□□□ -1.06
SGCE-203ENST00000425444 A0A1B0GVG6 124 aa8.42□□□□□ -1.06
SGCE-203ENST00000425444 NTF3P20783 257 aa8.42□□□□□ -1.06
SGCE-203ENST00000425444 CTRLP40313 264 aa8.42□□□□□ -1.06
SGCE-203ENST00000425444 WFDC2Q14508 124 aa8.42□□□□□ -1.06
SGCE-203ENST00000425444 MPV17L2Q567V2 206 aa8.42□□□□□ -1.06
SGCE-203ENST00000425444 OCC1Q8TAD7 63 aa8.42□□□□□ -1.06
SGCE-203ENST00000425444 DEFB104AQ8WTQ1 72 aa8.42□□□□□ -1.06
SGCE-203ENST00000425444 DNAJC30Q96LL9 226 aa8.42□□□□□ -1.06
SGCE-203ENST00000425444 EIF5A2Q9GZV4 153 aaKnown RBP8.42□□□□□ -1.06
SGCE-203ENST00000425444 DPH3P1Q9H4G8 78 aa8.42□□□□□ -1.06
SGCE-203ENST00000425444 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.41□□□□□ -1.06
SGCE-203ENST00000425444 TRBV25-1A0A075B6N4 114 aa8.41□□□□□ -1.06
SGCE-203ENST00000425444 M0QY20 66 aa8.41□□□□□ -1.06
SGCE-203ENST00000425444 ANGP03950 147 aaKnown RBP8.41□□□□□ -1.06
SGCE-203ENST00000425444 PLA2G1BP04054 148 aaKnown RBP8.41□□□□□ -1.06
SGCE-203ENST00000425444 Q0VG73 95 aa8.41□□□□□ -1.06
SGCE-203ENST00000425444 TWIST1Q15672 202 aa8.41□□□□□ -1.06
SGCE-203ENST00000425444 C15orf54Q8N8G6 183 aa8.41□□□□□ -1.06
SGCE-203ENST00000425444 LYPD6BQ8NI32 183 aa8.41□□□□□ -1.06
SGCE-203ENST00000425444 BAALCQ8WXS3 180 aa8.41□□□□□ -1.06
SGCE-203ENST00000425444 C1orf43Q9BWL3 253 aa8.41□□□□□ -1.06
SGCE-203ENST00000425444 GATCO43716 136 aaKnown RBP8.4□□□□□ -1.06
SGCE-203ENST00000425444 RASL11AQ6T310 242 aa8.4□□□□□ -1.06
SGCE-203ENST00000425444 IGHV1-24A0A0C4DH33 117 aa8.39□□□□□ -1.07
SGCE-203ENST00000425444 GAGE6Q13070 117 aa8.39□□□□□ -1.07
SGCE-203ENST00000425444 WDR73Q6P4I2 378 aa8.39□□□□□ -1.07
SGCE-203ENST00000425444 NTM-AS1Q6ZSK4 140 aa8.39□□□□□ -1.07
SGCE-203ENST00000425444 SMIM15Q7Z3B0 74 aa8.39□□□□□ -1.07
SGCE-203ENST00000425444 Q8N976 141 aa8.39□□□□□ -1.07
SGCE-203ENST00000425444 SMIM7Q9BQ49 75 aa8.39□□□□□ -1.07
SGCE-203ENST00000425444 KRTAP3-3Q9BYR6 98 aa8.39□□□□□ -1.07
SGCE-203ENST00000425444 KRTAP3-2Q9BYR7 98 aa8.39□□□□□ -1.07
SGCE-203ENST00000425444 ATRAIDQ6UW56 229 aa8.38□□□□□ -1.07
SGCE-203ENST00000425444 FAM210AQ96ND0 272 aa8.38□□□□□ -1.07
SGCE-203ENST00000425444 TMEM70Q9BUB7 260 aa8.38□□□□□ -1.07
SGCE-203ENST00000425444 NIT2Q9NQR4 276 aa8.38□□□□□ -1.07
SGCE-203ENST00000425444 A8MWL6 223 aa8.37□□□□□ -1.07
SGCE-203ENST00000425444 IQCJQ1A5X6 159 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms