RNA–Protein interactions for RNA: ENST00000424937.1

PTCHD3P2-201, Transcript of patched domain containing 3 pseudogene 2, humanhuman

BASIC

Gene PTCHD3P2, Length 1,205 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P2-201ENST00000424937 C9JQL5 133 aa15.03■□□□□ -0
PTCHD3P2-201ENST00000424937 SRSF3P84103 164 aaKnown RBP15.03■□□□□ -0
PTCHD3P2-201ENST00000424937 PEA15Q15121 130 aa15.03■□□□□ -0
PTCHD3P2-201ENST00000424937 CT83Q5H943 113 aa15.03■□□□□ -0
PTCHD3P2-201ENST00000424937 SPATA12Q7Z6I5 190 aa15.03■□□□□ -0
PTCHD3P2-201ENST00000424937 H7C1H1 209 aa15.02■□□□□ -0
PTCHD3P2-201ENST00000424937 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.02■□□□□ -0
PTCHD3P2-201ENST00000424937 URGCP-MRPS24S4R325 110 aa15.02■□□□□ -0
PTCHD3P2-201ENST00000424937 C16orf90A8MZG2 172 aa15.01□□□□□ -0.01
PTCHD3P2-201ENST00000424937 M0QY20 66 aa15.01□□□□□ -0.01
PTCHD3P2-201ENST00000424937 FAM74A3Q4VXF1 159 aa15.01□□□□□ -0.01
PTCHD3P2-201ENST00000424937 PGLYRP4Q96LB8 373 aa15.01□□□□□ -0.01
PTCHD3P2-201ENST00000424937 LAGE3Q14657 143 aa15□□□□□ -0.01
PTCHD3P2-201ENST00000424937 TMEM241Q24JQ0 296 aa15□□□□□ -0.01
PTCHD3P2-201ENST00000424937 DAZ4Q86SG3 579 aaKnown RBP15□□□□□ -0.01
PTCHD3P2-201ENST00000424937 NIT1Q86X76 327 aa15□□□□□ -0.01
PTCHD3P2-201ENST00000424937 DAZ3Q9NR90 486 aaKnown RBP15□□□□□ -0.01
PTCHD3P2-201ENST00000424937 OSTCQ9NRP0 149 aa15□□□□□ -0.01
PTCHD3P2-201ENST00000424937 TRBV6-8A0A0A6YYG3 113 aa14.99□□□□□ -0.01
PTCHD3P2-201ENST00000424937 EREGO14944 169 aa14.99□□□□□ -0.01
PTCHD3P2-201ENST00000424937 PSCAO43653 123 aa14.99□□□□□ -0.01
PTCHD3P2-201ENST00000424937 KRTAP10-2P60368 255 aa14.98□□□□□ -0.01
PTCHD3P2-201ENST00000424937 RPL23P62829 140 aaKnown RBP14.98□□□□□ -0.01
PTCHD3P2-201ENST00000424937 ADIRFQ15847 76 aa14.98□□□□□ -0.01
PTCHD3P2-201ENST00000424937 RASL11AQ6T310 242 aa14.98□□□□□ -0.01
PTCHD3P2-201ENST00000424937 C15orf54Q8N8G6 183 aa14.98□□□□□ -0.01
PTCHD3P2-201ENST00000424937 ISOC2Q96AB3 205 aa14.98□□□□□ -0.01
PTCHD3P2-201ENST00000424937 DNAJC30Q96LL9 226 aa14.98□□□□□ -0.01
PTCHD3P2-201ENST00000424937 KIAA1109Q2LD37 5005 aa14.97□□□□□ -0.01
PTCHD3P2-201ENST00000424937 KCNIP4Q6PIL6 250 aa14.97□□□□□ -0.01
PTCHD3P2-201ENST00000424937 SMIM15Q7Z3B0 74 aa14.97□□□□□ -0.01
PTCHD3P2-201ENST00000424937 TSKUQ8WUA8 353 aa14.97□□□□□ -0.01
PTCHD3P2-201ENST00000424937 BORCS7Q96B45 105 aa14.97□□□□□ -0.01
PTCHD3P2-201ENST00000424937 SMDT1Q9H4I9 107 aa14.97□□□□□ -0.01
PTCHD3P2-201ENST00000424937 NAT8Q9UHE5 227 aa14.97□□□□□ -0.01
PTCHD3P2-201ENST00000424937 A0A087WX48 190 aa14.96□□□□□ -0.01
PTCHD3P2-201ENST00000424937 HIGD1CA8MV81 97 aa14.96□□□□□ -0.01
PTCHD3P2-201ENST00000424937 GFRA4Q9GZZ7 299 aa14.96□□□□□ -0.01
PTCHD3P2-201ENST00000424937 A0A087WTM6 91 aa14.95□□□□□ -0.02
PTCHD3P2-201ENST00000424937 FOXA3P55318 350 aaPredicted RBP14.95□□□□□ -0.02
PTCHD3P2-201ENST00000424937 TMEM97Q5BJF2 176 aa14.95□□□□□ -0.02
PTCHD3P2-201ENST00000424937 CHCHD7Q9BUK0 85 aa14.95□□□□□ -0.02
PTCHD3P2-201ENST00000424937 V9GYV3 84 aa14.95□□□□□ -0.02
PTCHD3P2-201ENST00000424937 TRAV26-2A0A0B4J265 109 aa14.94□□□□□ -0.02
PTCHD3P2-201ENST00000424937 TMEM262E9PQX1 116 aa14.94□□□□□ -0.02
PTCHD3P2-201ENST00000424937 RAB14P61106 215 aa14.94□□□□□ -0.02
PTCHD3P2-201ENST00000424937 CHCHD5Q9BSY4 110 aa14.94□□□□□ -0.02
PTCHD3P2-201ENST00000424937 KLK12Q9UKR0 248 aa14.94□□□□□ -0.02
PTCHD3P2-201ENST00000424937 TRAV8-3A0A0A6YYJ7 113 aa14.93□□□□□ -0.02
PTCHD3P2-201ENST00000424937 NTM-AS1Q6ZSK4 140 aa14.93□□□□□ -0.02
PTCHD3P2-201ENST00000424937 NIT2Q9NQR4 276 aa14.93□□□□□ -0.02
PTCHD3P2-201ENST00000424937 TRBV25-1A0A075B6N4 114 aa14.92□□□□□ -0.02
PTCHD3P2-201ENST00000424937 A0A1B0GUT8 65 aa14.92□□□□□ -0.02
PTCHD3P2-201ENST00000424937 FAM231BA6NCW3 169 aa14.92□□□□□ -0.02
PTCHD3P2-201ENST00000424937 GATD1Q8NB37 220 aa14.92□□□□□ -0.02
PTCHD3P2-201ENST00000424937 FUSP35637 526 aaKnown RBP eCLIP14.91□□□□□ -0.02
PTCHD3P2-201ENST00000424937 MPV17L2Q567V2 206 aa14.91□□□□□ -0.02
PTCHD3P2-201ENST00000424937 TM2D2Q9BX73 214 aa14.91□□□□□ -0.02
PTCHD3P2-201ENST00000424937 HERC2O95714 4834 aa14.9□□□□□ -0.02
PTCHD3P2-201ENST00000424937 ELOBQ15370 118 aa14.9□□□□□ -0.02
PTCHD3P2-201ENST00000424937 IGHV1-24A0A0C4DH33 117 aa14.89□□□□□ -0.03
PTCHD3P2-201ENST00000424937 PKIAP61925 76 aa14.89□□□□□ -0.03
PTCHD3P2-201ENST00000424937 UBE2WQ96B02 151 aa14.89□□□□□ -0.03
PTCHD3P2-201ENST00000424937 DNAH5Q8TE73 4624 aa14.89□□□□□ -0.03
PTCHD3P2-201ENST00000424937 LRP1BQ9NZR2 4599 aa14.88□□□□□ -0.03
PTCHD3P2-201ENST00000424937 LRCOL1A6NCL2 159 aa14.88□□□□□ -0.03
PTCHD3P2-201ENST00000424937 GAGE6Q13070 117 aa14.88□□□□□ -0.03
PTCHD3P2-201ENST00000424937 IQCJQ1A5X6 159 aa14.88□□□□□ -0.03
PTCHD3P2-201ENST00000424937 NUP35Q8NFH5 326 aa14.88□□□□□ -0.03
PTCHD3P2-201ENST00000424937 DEFB104AQ8WTQ1 72 aa14.88□□□□□ -0.03
PTCHD3P2-201ENST00000424937 FRZBQ92765 325 aa14.88□□□□□ -0.03
PTCHD3P2-201ENST00000424937 RPL39LQ96EH5 51 aaKnown RBP14.88□□□□□ -0.03
PTCHD3P2-201ENST00000424937 RMI2Q96E14 147 aa14.87□□□□□ -0.03
PTCHD3P2-201ENST00000424937 PGPEP1Q9NXJ5 209 aa14.87□□□□□ -0.03
PTCHD3P2-201ENST00000424937 IGKV2D-24A0A075B6R9 120 aa14.86□□□□□ -0.03
PTCHD3P2-201ENST00000424937 ANGP03950 147 aaKnown RBP14.86□□□□□ -0.03
PTCHD3P2-201ENST00000424937 RIGQ13278 110 aa14.86□□□□□ -0.03
PTCHD3P2-201ENST00000424937 CDPF1Q6NVV7 123 aa14.86□□□□□ -0.03
PTCHD3P2-201ENST00000424937 ATRAIDQ6UW56 229 aa14.86□□□□□ -0.03
PTCHD3P2-201ENST00000424937 Q8N976 141 aa14.86□□□□□ -0.03
PTCHD3P2-201ENST00000424937 NAT8BQ9UHF3 227 aa14.86□□□□□ -0.03
PTCHD3P2-201ENST00000424937 CRPP02741 224 aa14.85□□□□□ -0.03
PTCHD3P2-201ENST00000424937 COTL1Q14019 142 aa14.85□□□□□ -0.03
PTCHD3P2-201ENST00000424937 TMEM243Q9BU79 118 aa14.85□□□□□ -0.03
PTCHD3P2-201ENST00000424937 TMEM191AQ9H0A3 160 aa14.85□□□□□ -0.03
PTCHD3P2-201ENST00000424937 CLLU1Q5K131 121 aa14.84□□□□□ -0.03
PTCHD3P2-201ENST00000424937 COX11Q9Y6N1 276 aa14.84□□□□□ -0.03
PTCHD3P2-201ENST00000424937 SMIM27A0A1W2PRY6 76 aa14.83□□□□□ -0.04
PTCHD3P2-201ENST00000424937 AMTP48728 403 aa14.83□□□□□ -0.04
PTCHD3P2-201ENST00000424937 RBX1P62877 108 aa14.83□□□□□ -0.04
PTCHD3P2-201ENST00000424937 Q0VG73 95 aa14.83□□□□□ -0.04
PTCHD3P2-201ENST00000424937 AMN1Q8IY45 258 aa14.83□□□□□ -0.04
PTCHD3P2-201ENST00000424937 Q8N814 137 aa14.83□□□□□ -0.04
PTCHD3P2-201ENST00000424937 IFITM2Q01629 132 aa14.82□□□□□ -0.04
PTCHD3P2-201ENST00000424937 WFDC2Q14508 124 aa14.82□□□□□ -0.04
PTCHD3P2-201ENST00000424937 RNF185Q96GF1 192 aa14.82□□□□□ -0.04
PTCHD3P2-201ENST00000424937 RYR1P21817 5038 aa14.82□□□□□ -0.04
PTCHD3P2-201ENST00000424937 LECT2O14960 151 aa14.81□□□□□ -0.04
PTCHD3P2-201ENST00000424937 CLPSL2Q6UWE3 100 aa14.81□□□□□ -0.04
PTCHD3P2-201ENST00000424937 ENHOQ6UWT2 76 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 224 ms