RNA–Protein interactions for RNA: ENST00000423960.1

FOXN4-203, Transcript of forkhead box N4, humanhuman

TSL 1 (best)

Gene FOXN4, Length 1,219 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-203ENST00000423960 MRPL54Q6P161 138 aaKnown RBP11.73□□□□□ -0.53
FOXN4-203ENST00000423960 SVBPQ8N300 66 aa11.73□□□□□ -0.53
FOXN4-203ENST00000423960 RPS10P5Q9NQ39 176 aa11.73□□□□□ -0.53
FOXN4-203ENST00000423960 TMEM242Q9NWH2 141 aa11.73□□□□□ -0.53
FOXN4-203ENST00000423960 BIRC6Q9NR09 4857 aa11.72□□□□□ -0.53
FOXN4-203ENST00000423960 S100A8P05109 93 aa11.72□□□□□ -0.53
FOXN4-203ENST00000423960 LINC00694P0DN24 101 aa11.72□□□□□ -0.53
FOXN4-203ENST00000423960 HBBP68871 147 aa11.72□□□□□ -0.53
FOXN4-203ENST00000423960 ATP5L2Q7Z4Y8 100 aa11.72□□□□□ -0.53
FOXN4-203ENST00000423960 NEXN-AS1Q8NBZ9 246 aa11.72□□□□□ -0.53
FOXN4-203ENST00000423960 A0A1B0GXF2 115 aa11.71□□□□□ -0.53
FOXN4-203ENST00000423960 SNAPINO95295 136 aa11.71□□□□□ -0.53
FOXN4-203ENST00000423960 KCNIP4Q6PIL6 250 aa11.71□□□□□ -0.53
FOXN4-203ENST00000423960 RASL11AQ6T310 242 aa11.71□□□□□ -0.53
FOXN4-203ENST00000423960 GATD1Q8NB37 220 aa11.71□□□□□ -0.53
FOXN4-203ENST00000423960 BTF3L4Q96K17 158 aa11.71□□□□□ -0.53
FOXN4-203ENST00000423960 DNAJC30Q96LL9 226 aa11.71□□□□□ -0.53
FOXN4-203ENST00000423960 GTSF1LQ9H1H1 148 aa11.71□□□□□ -0.53
FOXN4-203ENST00000423960 MRPS16Q9Y3D3 137 aaKnown RBP11.71□□□□□ -0.53
FOXN4-203ENST00000423960 TNFRSF18Q9Y5U5 241 aa11.71□□□□□ -0.53
FOXN4-203ENST00000423960 TRAV26-2A0A0B4J265 109 aa11.7□□□□□ -0.54
FOXN4-203ENST00000423960 RAB4AP20338 218 aa11.7□□□□□ -0.54
FOXN4-203ENST00000423960 TIRAPP58753 221 aa11.7□□□□□ -0.54
FOXN4-203ENST00000423960 AMN1Q8IY45 258 aa11.7□□□□□ -0.54
FOXN4-203ENST00000423960 FRZBQ92765 325 aa11.7□□□□□ -0.54
FOXN4-203ENST00000423960 RNF185Q96GF1 192 aa11.7□□□□□ -0.54
FOXN4-203ENST00000423960 NIT2Q9NQR4 276 aa11.7□□□□□ -0.54
FOXN4-203ENST00000423960 S100PP25815 95 aa11.69□□□□□ -0.54
FOXN4-203ENST00000423960 UBE2D3P61077 147 aa11.69□□□□□ -0.54
FOXN4-203ENST00000423960 UBE2D2P62837 147 aa11.69□□□□□ -0.54
FOXN4-203ENST00000423960 FAM104BQ5XKR9 115 aa11.69□□□□□ -0.54
FOXN4-203ENST00000423960 UPK3BQ9BT76 320 aa11.69□□□□□ -0.54
FOXN4-203ENST00000423960 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.68□□□□□ -0.54
FOXN4-203ENST00000423960 TRAV9-1A0A075B6T8 112 aa11.67□□□□□ -0.54
FOXN4-203ENST00000423960 MRAP2Q96G30 205 aa11.67□□□□□ -0.54
FOXN4-203ENST00000423960 Q9H8V8 135 aa11.67□□□□□ -0.54
FOXN4-203ENST00000423960 URGCP-MRPS24S4R325 110 aa11.67□□□□□ -0.54
FOXN4-203ENST00000423960 MRPL51Q4U2R6 128 aaKnown RBP11.66□□□□□ -0.54
FOXN4-203ENST00000423960 LELP1Q5T871 98 aa11.66□□□□□ -0.54
FOXN4-203ENST00000423960 DAZ4Q86SG3 579 aaKnown RBP11.66□□□□□ -0.54
FOXN4-203ENST00000423960 DAZ3Q9NR90 486 aaKnown RBP11.66□□□□□ -0.54
FOXN4-203ENST00000423960 IGHV3-38A0A0C4DH36 116 aa11.65□□□□□ -0.54
FOXN4-203ENST00000423960 RPL39LQ96EH5 51 aaKnown RBP11.65□□□□□ -0.54
FOXN4-203ENST00000423960 KMT2AQ03164 3969 aa11.65□□□□□ -0.54
FOXN4-203ENST00000423960 DNAH6Q9C0G6 4158 aa11.65□□□□□ -0.54
FOXN4-203ENST00000423960 IGLV2-18A0A075B6J9 118 aa11.64□□□□□ -0.55
FOXN4-203ENST00000423960 TRAV8-6A0A0B4J262 113 aa11.64□□□□□ -0.55
FOXN4-203ENST00000423960 GAS8-AS1O95177 125 aa11.64□□□□□ -0.55
FOXN4-203ENST00000423960 OR10J3Q5JRS4 329 aa11.64□□□□□ -0.55
FOXN4-203ENST00000423960 SMKR1H3BMG3 65 aa11.63□□□□□ -0.55
FOXN4-203ENST00000423960 SIVA1O15304 175 aa11.63□□□□□ -0.55
FOXN4-203ENST00000423960 ATRAIDQ6UW56 229 aa11.63□□□□□ -0.55
FOXN4-203ENST00000423960 TRBV6-5A0A0K0K1A5 114 aa11.62□□□□□ -0.55
FOXN4-203ENST00000423960 PPP1R17O96001 155 aa11.62□□□□□ -0.55
FOXN4-203ENST00000423960 CKS2P33552 79 aa11.62□□□□□ -0.55
FOXN4-203ENST00000423960 TMEM97Q5BJF2 176 aa11.62□□□□□ -0.55
FOXN4-203ENST00000423960 NCR2O95944 276 aa11.61□□□□□ -0.55
FOXN4-203ENST00000423960 RPS10P46783 165 aaKnown RBP11.61□□□□□ -0.55
FOXN4-203ENST00000423960 WFDC10BQ8IUB3 73 aa11.61□□□□□ -0.55
FOXN4-203ENST00000423960 ST20Q9HBF5 79 aa11.61□□□□□ -0.55
FOXN4-203ENST00000423960 TRBV6-8A0A0A6YYG3 113 aa11.6□□□□□ -0.55
FOXN4-203ENST00000423960 SDHAF1A6NFY7 115 aa11.6□□□□□ -0.55
FOXN4-203ENST00000423960 M0R2N4 97 aa11.6□□□□□ -0.55
FOXN4-203ENST00000423960 PPBPP02775 128 aa11.6□□□□□ -0.55
FOXN4-203ENST00000423960 TMEM136Q6ZRR5 245 aa11.6□□□□□ -0.55
FOXN4-203ENST00000423960 NRACQ8N912 160 aa11.6□□□□□ -0.55
FOXN4-203ENST00000423960 NBDYA0A0U1RRE5 68 aa11.59□□□□□ -0.55
FOXN4-203ENST00000423960 NTM-AS1Q6ZSK4 140 aa11.59□□□□□ -0.55
FOXN4-203ENST00000423960 D6R8Y8 96 aa11.58□□□□□ -0.56
FOXN4-203ENST00000423960 DNAH10OSP0CZ25 163 aa11.58□□□□□ -0.56
FOXN4-203ENST00000423960 PMCHP20382 165 aa11.58□□□□□ -0.56
FOXN4-203ENST00000423960 ELOBQ15370 118 aa11.58□□□□□ -0.56
FOXN4-203ENST00000423960 COX19Q49B96 90 aa11.58□□□□□ -0.56
FOXN4-203ENST00000423960 ORMDL3Q8N138 153 aa11.58□□□□□ -0.56
FOXN4-203ENST00000423960 TMEM70Q9BUB7 260 aa11.58□□□□□ -0.56
FOXN4-203ENST00000423960 GNB1LQ9BYB4 327 aa11.58□□□□□ -0.56
FOXN4-203ENST00000423960 DNAH10Q8IVF4 4471 aa11.57□□□□□ -0.56
FOXN4-203ENST00000423960 FRAS1Q86XX4 4008 aa11.57□□□□□ -0.56
FOXN4-203ENST00000423960 TRBV24-1A0A075B6N3 115 aa11.57□□□□□ -0.56
FOXN4-203ENST00000423960 TRBV25-1A0A075B6N4 114 aa11.57□□□□□ -0.56
FOXN4-203ENST00000423960 TRAV9-2A0A087WT02 112 aa11.57□□□□□ -0.56
FOXN4-203ENST00000423960 TGIF2-C20orf24A0A0A6YYL0 155 aa11.57□□□□□ -0.56
FOXN4-203ENST00000423960 IGHV1-24A0A0C4DH33 117 aa11.57□□□□□ -0.56
FOXN4-203ENST00000423960 I3L3M4 83 aa11.57□□□□□ -0.56
FOXN4-203ENST00000423960 POLR2KP53803 58 aaKnown RBP11.57□□□□□ -0.56
FOXN4-203ENST00000423960 COTL1Q14019 142 aa11.57□□□□□ -0.56
FOXN4-203ENST00000423960 TTC32Q5I0X7 151 aa11.57□□□□□ -0.56
FOXN4-203ENST00000423960 Q6ZR54 194 aa11.57□□□□□ -0.56
FOXN4-203ENST00000423960 DEFB104AQ8WTQ1 72 aa11.57□□□□□ -0.56
FOXN4-203ENST00000423960 SMCO4Q9NRQ5 59 aa11.57□□□□□ -0.56
FOXN4-203ENST00000423960 VCYO14598 125 aa11.56□□□□□ -0.56
FOXN4-203ENST00000423960 TNFRSF6BO95407 300 aa11.56□□□□□ -0.56
FOXN4-203ENST00000423960 APCSP02743 223 aa11.56□□□□□ -0.56
FOXN4-203ENST00000423960 SUMO2P61956 95 aaKnown RBP11.56□□□□□ -0.56
FOXN4-203ENST00000423960 IQCJQ1A5X6 159 aa11.56□□□□□ -0.56
FOXN4-203ENST00000423960 LINC01556Q5JQF7 62 aa11.56□□□□□ -0.56
FOXN4-203ENST00000423960 PRELID3AQ96N28 172 aa11.56□□□□□ -0.56
FOXN4-203ENST00000423960 C20orf78Q9BR46 151 aa11.56□□□□□ -0.56
FOXN4-203ENST00000423960 TMEM262E9PQX1 116 aa11.55□□□□□ -0.56
FOXN4-203ENST00000423960 K7EP13 123 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms