RNA–Protein interactions for RNA: ENST00000423141.1

NPC1L1-203, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-203ENST00000423141 A0A0J9YXY3 114 aa12.38□□□□□ -0.43
NPC1L1-203ENST00000423141 M0R2P5 195 aa12.38□□□□□ -0.43
NPC1L1-203ENST00000423141 TTC32Q5I0X7 151 aa12.38□□□□□ -0.43
NPC1L1-203ENST00000423141 RHPN1-AS1Q9BWJ2 59 aa12.38□□□□□ -0.43
NPC1L1-203ENST00000423141 MDFICQ9P1T7 246 aa12.38□□□□□ -0.43
NPC1L1-203ENST00000423141 TRAV8-4A0A0B4J246 113 aa12.37□□□□□ -0.43
NPC1L1-203ENST00000423141 A0A1W2PPR1 153 aa12.37□□□□□ -0.43
NPC1L1-203ENST00000423141 NPFFO15130 113 aa12.37□□□□□ -0.43
NPC1L1-203ENST00000423141 IFITM1P13164 125 aa12.37□□□□□ -0.43
NPC1L1-203ENST00000423141 Q6ZSV7 163 aa12.37□□□□□ -0.43
NPC1L1-203ENST00000423141 C15orf53Q8NAA6 179 aa12.37□□□□□ -0.43
NPC1L1-203ENST00000423141 GAGE12JA6NER3 117 aa12.37□□□□□ -0.43
NPC1L1-203ENST00000423141 M0QY20 66 aa12.37□□□□□ -0.43
NPC1L1-203ENST00000423141 GAGE7O76087 117 aa12.37□□□□□ -0.43
NPC1L1-203ENST00000423141 GAGE12FP0CL80 117 aa12.37□□□□□ -0.43
NPC1L1-203ENST00000423141 GAGE12GP0CL81 117 aa12.37□□□□□ -0.43
NPC1L1-203ENST00000423141 GAGE12IP0CL82 117 aa12.37□□□□□ -0.43
NPC1L1-203ENST00000423141 GAGE4Q13068 117 aa12.37□□□□□ -0.43
NPC1L1-203ENST00000423141 FBXL19-AS1Q494R0 122 aa12.37□□□□□ -0.43
NPC1L1-203ENST00000423141 TRBV6-5A0A0K0K1A5 114 aa12.36□□□□□ -0.43
NPC1L1-203ENST00000423141 IGHV1-69P01742 117 aa12.36□□□□□ -0.43
NPC1L1-203ENST00000423141 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.36□□□□□ -0.43
NPC1L1-203ENST00000423141 TRBV10-2A0A0K0K1G8 114 aa12.36□□□□□ -0.43
NPC1L1-203ENST00000423141 SPXQ9BT56 116 aa12.36□□□□□ -0.43
NPC1L1-203ENST00000423141 TRAV12-2A0A075B6T6 113 aa12.35□□□□□ -0.43
NPC1L1-203ENST00000423141 RPL13AP40429 203 aaKnown RBP12.35□□□□□ -0.43
NPC1L1-203ENST00000423141 NSUN5P1Q3KNT7 163 aa12.35□□□□□ -0.43
NPC1L1-203ENST00000423141 PRRC2AP48634 2157 aaKnown RBP12.35□□□□□ -0.43
NPC1L1-203ENST00000423141 IGKV3-20P01619 116 aa12.35□□□□□ -0.43
NPC1L1-203ENST00000423141 PRSS2P07478 247 aa12.35□□□□□ -0.43
NPC1L1-203ENST00000423141 NPC2P61916 151 aa12.35□□□□□ -0.43
NPC1L1-203ENST00000423141 LITAFQ99732 161 aa12.35□□□□□ -0.43
NPC1L1-203ENST00000423141 MOB4Q9Y3A3 225 aa12.35□□□□□ -0.43
NPC1L1-203ENST00000423141 IGLV4-3A0A075B6K6 122 aa12.34□□□□□ -0.43
NPC1L1-203ENST00000423141 TRAV8-3A0A0A6YYJ7 113 aa12.34□□□□□ -0.43
NPC1L1-203ENST00000423141 H3BMM0 161 aa12.34□□□□□ -0.43
NPC1L1-203ENST00000423141 IGHV3-30-3P0DP02 117 aa12.34□□□□□ -0.43
NPC1L1-203ENST00000423141 ADAMTSL4-AS1Q5T5F5 129 aa12.34□□□□□ -0.43
NPC1L1-203ENST00000423141 C20orf203Q8NBC4 194 aa12.34□□□□□ -0.43
NPC1L1-203ENST00000423141 UBE2WQ96B02 151 aa12.34□□□□□ -0.43
NPC1L1-203ENST00000423141 SORL1Q92673 2214 aa12.34□□□□□ -0.43
NPC1L1-203ENST00000423141 TRBV7-9A0A0J9YWB2 115 aa12.34□□□□□ -0.43
NPC1L1-203ENST00000423141 TRBV30A0A0K0K1B3 111 aa12.34□□□□□ -0.43
NPC1L1-203ENST00000423141 C2orf82Q6UX34 121 aa12.33□□□□□ -0.43
NPC1L1-203ENST00000423141 IGHV3-16A0A0C4DH30 117 aa12.33□□□□□ -0.44
NPC1L1-203ENST00000423141 H7C423 109 aa12.33□□□□□ -0.44
NPC1L1-203ENST00000423141 BRD3OSQ6XYD6 125 aa12.33□□□□□ -0.44
NPC1L1-203ENST00000423141 UBTD1Q9HAC8 227 aa12.33□□□□□ -0.44
NPC1L1-203ENST00000423141 A8MZ25 164 aa12.32□□□□□ -0.44
NPC1L1-203ENST00000423141 ADORA2A-AS1P86434 159 aa12.32□□□□□ -0.44
NPC1L1-203ENST00000423141 RHOHQ15669 191 aa12.32□□□□□ -0.44
NPC1L1-203ENST00000423141 RNASE13Q5GAN3 156 aaKnown RBP12.32□□□□□ -0.44
NPC1L1-203ENST00000423141 CEMP1Q6PRD7 247 aaPredicted RBP12.32□□□□□ -0.44
NPC1L1-203ENST00000423141 CLEC2BQ92478 149 aa12.32□□□□□ -0.44
NPC1L1-203ENST00000423141 C9orf85Q96MD7 179 aa12.32□□□□□ -0.44
NPC1L1-203ENST00000423141 ICOSQ9Y6W8 199 aa12.32□□□□□ -0.44
NPC1L1-203ENST00000423141 ABCA2Q9BZC7 2435 aa12.32□□□□□ -0.44
NPC1L1-203ENST00000423141 CRYBG3Q68DQ2 2970 aa12.32□□□□□ -0.44
NPC1L1-203ENST00000423141 A0A0J9YX75 114 aa12.31□□□□□ -0.44
NPC1L1-203ENST00000423141 BPESC1Q9GZL8 116 aa12.31□□□□□ -0.44
NPC1L1-203ENST00000423141 PF4V1P10720 104 aa12.31□□□□□ -0.44
NPC1L1-203ENST00000423141 LMO4P61968 165 aa12.31□□□□□ -0.44
NPC1L1-203ENST00000423141 LY6EQ16553 131 aa12.31□□□□□ -0.44
NPC1L1-203ENST00000423141 FAM104AQ969W3 186 aa12.31□□□□□ -0.44
NPC1L1-203ENST00000423141 Q6Q795 121 aa12.3□□□□□ -0.44
NPC1L1-203ENST00000423141 LINC01600Q96MT4 127 aa12.3□□□□□ -0.44
NPC1L1-203ENST00000423141 TIMM21Q9BVV7 248 aa12.3□□□□□ -0.44
NPC1L1-203ENST00000423141 DUX3Q96PT4 197 aa12.3□□□□□ -0.44
NPC1L1-203ENST00000423141 DCANP1Q8TF63 244 aa12.29□□□□□ -0.44
NPC1L1-203ENST00000423141 SMIM20Q8N5G0 67 aa12.29□□□□□ -0.44
NPC1L1-203ENST00000423141 DAZ1Q9NQZ3 744 aaKnown RBP12.29□□□□□ -0.44
NPC1L1-203ENST00000423141 I3L3M4 83 aa12.28□□□□□ -0.44
NPC1L1-203ENST00000423141 CD28P10747 220 aa12.28□□□□□ -0.44
NPC1L1-203ENST00000423141 FOXC1Q12948 553 aa12.27□□□□□ -0.44
NPC1L1-203ENST00000423141 IGF2RP11717 2491 aa12.27□□□□□ -0.44
NPC1L1-203ENST00000423141 IGHV3-73A0A0B4J1V6 119 aa12.27□□□□□ -0.45
NPC1L1-203ENST00000423141 DOPEY2Q9Y3R5 2298 aa12.27□□□□□ -0.45
NPC1L1-203ENST00000423141 BLCAPP62952 87 aa12.26□□□□□ -0.45
NPC1L1-203ENST00000423141 NDUFA12Q9UI09 145 aa12.26□□□□□ -0.45
NPC1L1-203ENST00000423141 SPINK13Q1W4C9 94 aa12.26□□□□□ -0.45
NPC1L1-203ENST00000423141 DAND5Q8N907 189 aa12.26□□□□□ -0.45
NPC1L1-203ENST00000423141 USMG5Q96IX5 58 aa12.26□□□□□ -0.45
NPC1L1-203ENST00000423141 PROK1P58294 105 aa12.25□□□□□ -0.45
NPC1L1-203ENST00000423141 HERV-K104P63124 156 aa12.25□□□□□ -0.45
NPC1L1-203ENST00000423141 SHISA2Q6UWI4 295 aa12.25□□□□□ -0.45
NPC1L1-203ENST00000423141 C3orf56Q8N813 242 aa12.25□□□□□ -0.45
NPC1L1-203ENST00000423141 CHCHD5Q9BSY4 110 aa12.25□□□□□ -0.45
NPC1L1-203ENST00000423141 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.25□□□□□ -0.457e-9■■□□□ 13.1
NPC1L1-203ENST00000423141 ID1P41134 155 aa12.25□□□□□ -0.45
NPC1L1-203ENST00000423141 MRPS36P82909 103 aaKnown RBP12.25□□□□□ -0.45
NPC1L1-203ENST00000423141 Q9UF83 564 aa12.25□□□□□ -0.45
NPC1L1-203ENST00000423141 IGHV1-58A0A0C4DH39 117 aa12.24□□□□□ -0.45
NPC1L1-203ENST00000423141 MIAQ16674 131 aa12.24□□□□□ -0.45
NPC1L1-203ENST00000423141 H3BT86 120 aa12.24□□□□□ -0.45
NPC1L1-203ENST00000423141 CREBBPQ92793 2442 aa12.23□□□□□ -0.45
NPC1L1-203ENST00000423141 IGHV1OR15-1A0A075B7D0 117 aa12.23□□□□□ -0.45
NPC1L1-203ENST00000423141 LST1O00453 97 aa12.23□□□□□ -0.45
NPC1L1-203ENST00000423141 MEIG1Q5JSS6 88 aa12.23□□□□□ -0.45
NPC1L1-203ENST00000423141 SPANXDQ9BXN6 97 aa12.23□□□□□ -0.45
NPC1L1-203ENST00000423141 SPANXCQ9NY87 97 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 158.5 ms