RNA–Protein interactions for RNA: ENST00000422869.6

CTCFL-204, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-204ENST00000422869 ODF3Q96PU9 254 aa9.44□□□□□ -0.9
CTCFL-204ENST00000422869 UBTD1Q9HAC8 227 aa9.44□□□□□ -0.9
CTCFL-204ENST00000422869 M0R2P5 195 aa9.44□□□□□ -0.9
CTCFL-204ENST00000422869 CCL21O00585 134 aa9.44□□□□□ -0.9
CTCFL-204ENST00000422869 RPL13AP40429 203 aaKnown RBP9.44□□□□□ -0.9
CTCFL-204ENST00000422869 M0QY20 66 aa9.43□□□□□ -0.9
CTCFL-204ENST00000422869 IGHV4-39P01824 125 aa9.43□□□□□ -0.9
CTCFL-204ENST00000422869 A0A0J9YX75 114 aa9.43□□□□□ -0.9
CTCFL-204ENST00000422869 CCDC179H3BU77 68 aa9.43□□□□□ -0.9
CTCFL-204ENST00000422869 TRIAP1O43715 76 aa9.43□□□□□ -0.9
CTCFL-204ENST00000422869 Q1RN00 199 aa9.43□□□□□ -0.9
CTCFL-204ENST00000422869 MOB4Q9Y3A3 225 aa9.43□□□□□ -0.9
CTCFL-204ENST00000422869 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.42□□□□□ -0.9
CTCFL-204ENST00000422869 TRAV12-3A0A0B4J271 114 aa9.42□□□□□ -0.9
CTCFL-204ENST00000422869 A0A0J9YXY3 114 aa9.42□□□□□ -0.9
CTCFL-204ENST00000422869 TRBV30A0A0K0K1B3 111 aa9.42□□□□□ -0.9
CTCFL-204ENST00000422869 IGHV3-11P01762 117 aa9.42□□□□□ -0.9
CTCFL-204ENST00000422869 RHOHQ15669 191 aa9.42□□□□□ -0.9
CTCFL-204ENST00000422869 LITAFQ99732 161 aa9.42□□□□□ -0.9
CTCFL-204ENST00000422869 RHPN1-AS1Q9BWJ2 59 aa9.42□□□□□ -0.9
CTCFL-204ENST00000422869 ZFHX2Q9C0A1 2572 aaPredicted RBP9.42□□□□□ -0.9
CTCFL-204ENST00000422869 COL12A1Q99715 3063 aa9.42□□□□□ -0.9
CTCFL-204ENST00000422869 A0A0J9YXV3 536 aa9.42□□□□□ -0.9
CTCFL-204ENST00000422869 TRBV10-2A0A0K0K1G8 114 aa9.42□□□□□ -0.9
CTCFL-204ENST00000422869 A0A1W2PPR1 153 aa9.42□□□□□ -0.9
CTCFL-204ENST00000422869 BEX4Q9NWD9 120 aaPredicted RBP9.42□□□□□ -0.9
CTCFL-204ENST00000422869 MDFICQ9P1T7 246 aa9.42□□□□□ -0.9
CTCFL-204ENST00000422869 CEP295Q9C0D2 2601 aa9.41□□□□□ -0.9
CTCFL-204ENST00000422869 EDN2P20800 178 aa9.41□□□□□ -0.9
CTCFL-204ENST00000422869 Q6Q795 121 aa9.41□□□□□ -0.9
CTCFL-204ENST00000422869 C20orf203Q8NBC4 194 aa9.41□□□□□ -0.9
CTCFL-204ENST00000422869 C9orf85Q96MD7 179 aa9.41□□□□□ -0.9
CTCFL-204ENST00000422869 NBASA2RRP1 2371 aa9.41□□□□□ -0.9
CTCFL-204ENST00000422869 IFITM1P13164 125 aa9.41□□□□□ -0.9
CTCFL-204ENST00000422869 ZNF56Q15929 161 aa9.41□□□□□ -0.9
CTCFL-204ENST00000422869 CSDC2Q9Y534 153 aaKnown RBP9.41□□□□□ -0.9
CTCFL-204ENST00000422869 IGLV4-3A0A075B6K6 122 aa9.4□□□□□ -0.9
CTCFL-204ENST00000422869 TRAV8-4A0A0B4J246 113 aa9.4□□□□□ -0.9
CTCFL-204ENST00000422869 IGHV3-16A0A0C4DH30 117 aa9.4□□□□□ -0.9
CTCFL-204ENST00000422869 ADORA2A-AS1P86434 159 aa9.4□□□□□ -0.9
CTCFL-204ENST00000422869 CITED2Q99967 270 aaPredicted RBP9.4□□□□□ -0.9
CTCFL-204ENST00000422869 GAGE12JA6NER3 117 aa9.4□□□□□ -0.9
CTCFL-204ENST00000422869 ADARB2-AS1A8MUL3 147 aa9.4□□□□□ -0.9
CTCFL-204ENST00000422869 GAGE7O76087 117 aa9.4□□□□□ -0.9
CTCFL-204ENST00000422869 SPTA1P02549 2419 aa9.4□□□□□ -0.9
CTCFL-204ENST00000422869 GAGE12FP0CL80 117 aa9.4□□□□□ -0.9
CTCFL-204ENST00000422869 GAGE12GP0CL81 117 aa9.4□□□□□ -0.9
CTCFL-204ENST00000422869 GAGE12IP0CL82 117 aa9.4□□□□□ -0.9
CTCFL-204ENST00000422869 GAGE4Q13068 117 aa9.4□□□□□ -0.9
CTCFL-204ENST00000422869 PRRC2AP48634 2157 aaKnown RBP9.4□□□□□ -0.91
CTCFL-204ENST00000422869 H3BMM0 161 aa9.39□□□□□ -0.91
CTCFL-204ENST00000422869 IGHV3-30-3P0DP02 117 aa9.39□□□□□ -0.91
CTCFL-204ENST00000422869 LMO4P61968 165 aa9.39□□□□□ -0.91
CTCFL-204ENST00000422869 TTC32Q5I0X7 151 aa9.39□□□□□ -0.91
CTCFL-204ENST00000422869 UBE2WQ96B02 151 aa9.39□□□□□ -0.91
CTCFL-204ENST00000422869 IGHV3OR16-10A0A075B7F0 116 aa9.39□□□□□ -0.91
CTCFL-204ENST00000422869 C15orf53Q8NAA6 179 aa9.39□□□□□ -0.91
CTCFL-204ENST00000422869 ABCA2Q9BZC7 2435 aa9.39□□□□□ -0.91
CTCFL-204ENST00000422869 H7C423 109 aa9.39□□□□□ -0.91
CTCFL-204ENST00000422869 DCANP1Q8TF63 244 aa9.39□□□□□ -0.91
CTCFL-204ENST00000422869 FAM104AQ969W3 186 aa9.39□□□□□ -0.91
CTCFL-204ENST00000422869 PTPRQQ9UMZ3 2332 aa9.38□□□□□ -0.91
CTCFL-204ENST00000422869 MRPL23Q16540 153 aaKnown RBP9.38□□□□□ -0.91
CTCFL-204ENST00000422869 ADAMTSL4-AS1Q5T5F5 129 aa9.38□□□□□ -0.91
CTCFL-204ENST00000422869 PTPRZ1P23471 2315 aaPredicted RBP9.38□□□□□ -0.91
CTCFL-204ENST00000422869 DAZ1Q9NQZ3 744 aaKnown RBP9.38□□□□□ -0.91
CTCFL-204ENST00000422869 ICOSQ9Y6W8 199 aa9.38□□□□□ -0.91
CTCFL-204ENST00000422869 CRYBG3Q68DQ2 2970 aa9.37□□□□□ -0.91
CTCFL-204ENST00000422869 USMG5Q96IX5 58 aa9.37□□□□□ -0.91
CTCFL-204ENST00000422869 BPESC1Q9GZL8 116 aa9.37□□□□□ -0.91
CTCFL-204ENST00000422869 TRAV12-2A0A075B6T6 113 aa9.37□□□□□ -0.91
CTCFL-204ENST00000422869 I3L3M4 83 aa9.37□□□□□ -0.91
CTCFL-204ENST00000422869 C2orf82Q6UX34 121 aa9.37□□□□□ -0.91
CTCFL-204ENST00000422869 TRAV8-3A0A0A6YYJ7 113 aa9.36□□□□□ -0.91
CTCFL-204ENST00000422869 Q6ZSV7 163 aa9.36□□□□□ -0.91
CTCFL-204ENST00000422869 TIMM21Q9BVV7 248 aa9.36□□□□□ -0.91
CTCFL-204ENST00000422869 PRSS2P07478 247 aa9.36□□□□□ -0.91
CTCFL-204ENST00000422869 BRD3OSQ6XYD6 125 aa9.36□□□□□ -0.91
CTCFL-204ENST00000422869 K7ENP7 123 aa9.35□□□□□ -0.91
CTCFL-204ENST00000422869 MRPS36P82909 103 aaKnown RBP9.35□□□□□ -0.91
CTCFL-204ENST00000422869 SPANXDQ9BXN6 97 aa9.35□□□□□ -0.91
CTCFL-204ENST00000422869 SPANXCQ9NY87 97 aa9.35□□□□□ -0.91
CTCFL-204ENST00000422869 SPTAN1Q13813 2472 aaKnown RBP9.35□□□□□ -0.91
CTCFL-204ENST00000422869 H3BUA1 57 aa9.35□□□□□ -0.91
CTCFL-204ENST00000422869 CLEC2BQ92478 149 aa9.35□□□□□ -0.91
CTCFL-204ENST00000422869 AKAP6Q13023 2319 aa9.35□□□□□ -0.91
CTCFL-204ENST00000422869 LOC107984640A0A0U1RRK4 108 aa9.34□□□□□ -0.91
CTCFL-204ENST00000422869 H3BT86 120 aa9.34□□□□□ -0.91
CTCFL-204ENST00000422869 IGKV3-20P01619 116 aa9.34□□□□□ -0.91
CTCFL-204ENST00000422869 IGHG2P01859 326 aa9.34□□□□□ -0.91
CTCFL-204ENST00000422869 CD28P10747 220 aa9.33□□□□□ -0.92
CTCFL-204ENST00000422869 MIAQ16674 131 aa9.33□□□□□ -0.92
CTCFL-204ENST00000422869 CEMP1Q6PRD7 247 aaPredicted RBP9.33□□□□□ -0.92
CTCFL-204ENST00000422869 PYGO1Q9Y3Y4 419 aa9.33□□□□□ -0.92
CTCFL-204ENST00000422869 COL6A6A6NMZ7 2263 aa9.33□□□□□ -0.92
CTCFL-204ENST00000422869 IGHV1-58A0A0C4DH39 117 aa9.33□□□□□ -0.92
CTCFL-204ENST00000422869 A8MZ25 164 aa9.33□□□□□ -0.92
CTCFL-204ENST00000422869 NPC2P61916 151 aa9.33□□□□□ -0.92
CTCFL-204ENST00000422869 LY6EQ16553 131 aa9.33□□□□□ -0.92
CTCFL-204ENST00000422869 NDUFA12Q9UI09 145 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms