RNA–Protein interactions for RNA: ENST00000420401.5

ECHDC3-202, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 2

Gene ECHDC3, Length 854 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-202ENST00000420401 C10orf126Q8N4M7 172 aa12.37□□□□□ -0.43
ECHDC3-202ENST00000420401 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.37□□□□□ -0.43
ECHDC3-202ENST00000420401 LINC00315P59091 139 aa12.36□□□□□ -0.43
ECHDC3-202ENST00000420401 UBE2D3P61077 147 aa12.36□□□□□ -0.43
ECHDC3-202ENST00000420401 UBE2D2P62837 147 aa12.36□□□□□ -0.43
ECHDC3-202ENST00000420401 LINC01556Q5JQF7 62 aa12.36□□□□□ -0.43
ECHDC3-202ENST00000420401 H7C1H1 209 aa12.35□□□□□ -0.43
ECHDC3-202ENST00000420401 RPL23P62829 140 aaKnown RBP12.35□□□□□ -0.43
ECHDC3-202ENST00000420401 MAPKAPK5-AS1Q8N8E1 139 aa12.35□□□□□ -0.43
ECHDC3-202ENST00000420401 NEXN-AS1Q8NBZ9 246 aa12.35□□□□□ -0.43
ECHDC3-202ENST00000420401 ISOC2Q96AB3 205 aa12.35□□□□□ -0.43
ECHDC3-202ENST00000420401 BORCS7Q96B45 105 aa12.35□□□□□ -0.43
ECHDC3-202ENST00000420401 DPH3P1Q9H4G8 78 aa12.35□□□□□ -0.43
ECHDC3-202ENST00000420401 FOXA3P55318 350 aaPredicted RBP12.34□□□□□ -0.43
ECHDC3-202ENST00000420401 ADIRFQ15847 76 aa12.34□□□□□ -0.43
ECHDC3-202ENST00000420401 SMIM15Q7Z3B0 74 aa12.34□□□□□ -0.43
ECHDC3-202ENST00000420401 NFE4Q86UQ8 179 aa12.34□□□□□ -0.43
ECHDC3-202ENST00000420401 TSKUQ8WUA8 353 aa12.34□□□□□ -0.43
ECHDC3-202ENST00000420401 PGLYRP4Q96LB8 373 aa12.34□□□□□ -0.43
ECHDC3-202ENST00000420401 GFRA4Q9GZZ7 299 aa12.34□□□□□ -0.43
ECHDC3-202ENST00000420401 FAM231BA6NCW3 169 aa12.33□□□□□ -0.44
ECHDC3-202ENST00000420401 SUMO4Q6EEV6 95 aa12.33□□□□□ -0.44
ECHDC3-202ENST00000420401 DNAJC30Q96LL9 226 aa12.33□□□□□ -0.44
ECHDC3-202ENST00000420401 HSPG2P98160 4391 aa12.33□□□□□ -0.44
ECHDC3-202ENST00000420401 C16orf90A8MZG2 172 aa12.32□□□□□ -0.44
ECHDC3-202ENST00000420401 M0QY20 66 aa12.32□□□□□ -0.44
ECHDC3-202ENST00000420401 TNP2Q05952 138 aa12.32□□□□□ -0.44
ECHDC3-202ENST00000420401 CLLU1Q5K131 121 aa12.32□□□□□ -0.44
ECHDC3-202ENST00000420401 TNFRSF18Q9Y5U5 241 aa12.32□□□□□ -0.44
ECHDC3-202ENST00000420401 HIGD1CA8MV81 97 aa12.31□□□□□ -0.44
ECHDC3-202ENST00000420401 IGHV3-30P01768 117 aa12.31□□□□□ -0.44
ECHDC3-202ENST00000420401 IGHV3-33P01772 117 aa12.31□□□□□ -0.44
ECHDC3-202ENST00000420401 IGHV3-30-3P0DP02 117 aa12.31□□□□□ -0.44
ECHDC3-202ENST00000420401 IGHV3-30-5P0DP03 117 aa12.31□□□□□ -0.44
ECHDC3-202ENST00000420401 DAZ4Q86SG3 579 aaKnown RBP12.31□□□□□ -0.44
ECHDC3-202ENST00000420401 DAZ3Q9NR90 486 aaKnown RBP12.31□□□□□ -0.44
ECHDC3-202ENST00000420401 V9GYV3 84 aa12.31□□□□□ -0.44
ECHDC3-202ENST00000420401 CDK2AP2O75956 126 aa12.3□□□□□ -0.44
ECHDC3-202ENST00000420401 TMEM97Q5BJF2 176 aa12.3□□□□□ -0.44
ECHDC3-202ENST00000420401 RASL11AQ6T310 242 aa12.3□□□□□ -0.44
ECHDC3-202ENST00000420401 URGCP-MRPS24S4R325 110 aa12.3□□□□□ -0.44
ECHDC3-202ENST00000420401 A0A1B0GUT8 65 aa12.28□□□□□ -0.44
ECHDC3-202ENST00000420401 IBA57-AS1B1ANH7 110 aa12.28□□□□□ -0.44
ECHDC3-202ENST00000420401 KCNIP4Q6PIL6 250 aa12.28□□□□□ -0.44
ECHDC3-202ENST00000420401 Q6ZRN7 208 aaPredicted RBP12.28□□□□□ -0.44
ECHDC3-202ENST00000420401 NIT2Q9NQR4 276 aa12.28□□□□□ -0.44
ECHDC3-202ENST00000420401 TRBV6-8A0A0A6YYG3 113 aa12.27□□□□□ -0.45
ECHDC3-202ENST00000420401 IFITM2Q01629 132 aa12.27□□□□□ -0.45
ECHDC3-202ENST00000420401 FRZBQ92765 325 aa12.27□□□□□ -0.45
ECHDC3-202ENST00000420401 NAT8BQ9UHF3 227 aa12.27□□□□□ -0.45
ECHDC3-202ENST00000420401 NIT1Q86X76 327 aa12.26□□□□□ -0.45
ECHDC3-202ENST00000420401 NUP35Q8NFH5 326 aa12.26□□□□□ -0.45
ECHDC3-202ENST00000420401 A0A087WX48 190 aa12.25□□□□□ -0.45
ECHDC3-202ENST00000420401 RIGQ13278 110 aa12.25□□□□□ -0.45
ECHDC3-202ENST00000420401 LAGE3Q14657 143 aa12.25□□□□□ -0.45
ECHDC3-202ENST00000420401 CHCHD7Q9BUK0 85 aa12.25□□□□□ -0.45
ECHDC3-202ENST00000420401 TMEM262E9PQX1 116 aa12.24□□□□□ -0.45
ECHDC3-202ENST00000420401 PKIAP61925 76 aa12.24□□□□□ -0.45
ECHDC3-202ENST00000420401 Q8N1X5 172 aa12.24□□□□□ -0.45
ECHDC3-202ENST00000420401 GATD1Q8NB37 220 aa12.24□□□□□ -0.45
ECHDC3-202ENST00000420401 TRAV26-2A0A0B4J265 109 aa12.23□□□□□ -0.45
ECHDC3-202ENST00000420401 SMIM27A0A1W2PRY6 76 aa12.23□□□□□ -0.45
ECHDC3-202ENST00000420401 EREGO14944 169 aa12.23□□□□□ -0.45
ECHDC3-202ENST00000420401 ELOBQ15370 118 aa12.23□□□□□ -0.45
ECHDC3-202ENST00000420401 Q8N3U1 123 aa12.23□□□□□ -0.45
ECHDC3-202ENST00000420401 CHCHD5Q9BSY4 110 aa12.23□□□□□ -0.45
ECHDC3-202ENST00000420401 TMEM191AQ9H0A3 160 aa12.23□□□□□ -0.45
ECHDC3-202ENST00000420401 Q9HAA7 133 aa12.23□□□□□ -0.45
ECHDC3-202ENST00000420401 TRBV25-1A0A075B6N4 114 aa12.22□□□□□ -0.45
ECHDC3-202ENST00000420401 TRAV8-3A0A0A6YYJ7 113 aa12.22□□□□□ -0.45
ECHDC3-202ENST00000420401 PNRC1Q12796 327 aaPredicted RBP12.22□□□□□ -0.45
ECHDC3-202ENST00000420401 UQCC3Q6UW78 93 aa12.22□□□□□ -0.45
ECHDC3-202ENST00000420401 PPP1R2P9O14990 202 aa12.21□□□□□ -0.45
ECHDC3-202ENST00000420401 PSCAO43653 123 aa12.21□□□□□ -0.45
ECHDC3-202ENST00000420401 NTM-AS1Q6ZSK4 140 aa12.21□□□□□ -0.45
ECHDC3-202ENST00000420401 TM2D2Q9BX73 214 aa12.21□□□□□ -0.45
ECHDC3-202ENST00000420401 IGHV1-24A0A0C4DH33 117 aa12.2□□□□□ -0.46
ECHDC3-202ENST00000420401 IQCJQ1A5X6 159 aa12.2□□□□□ -0.46
ECHDC3-202ENST00000420401 A0A1B0GW15 77 aa12.19□□□□□ -0.46
ECHDC3-202ENST00000420401 SPATA12Q7Z6I5 190 aa12.19□□□□□ -0.46
ECHDC3-202ENST00000420401 RPL39LQ96EH5 51 aaKnown RBP12.19□□□□□ -0.46
ECHDC3-202ENST00000420401 KLK12Q9UKR0 248 aa12.19□□□□□ -0.46
ECHDC3-202ENST00000420401 MT-ND4LP03901 98 aa12.18□□□□□ -0.46
ECHDC3-202ENST00000420401 RAB4AP20338 218 aa12.18□□□□□ -0.46
ECHDC3-202ENST00000420401 COTL1Q14019 142 aa12.18□□□□□ -0.46
ECHDC3-202ENST00000420401 RMI2Q96E14 147 aa12.18□□□□□ -0.46
ECHDC3-202ENST00000420401 MRAP2Q96G30 205 aa12.18□□□□□ -0.46
ECHDC3-202ENST00000420401 LRP1BQ9NZR2 4599 aa12.18□□□□□ -0.46
ECHDC3-202ENST00000420401 A0A087WTM6 91 aa12.17□□□□□ -0.46
ECHDC3-202ENST00000420401 S100A8P05109 93 aa12.17□□□□□ -0.46
ECHDC3-202ENST00000420401 GAGE6Q13070 117 aa12.17□□□□□ -0.46
ECHDC3-202ENST00000420401 AMN1Q8IY45 258 aa12.17□□□□□ -0.46
ECHDC3-202ENST00000420401 TMEM243Q9BU79 118 aa12.17□□□□□ -0.46
ECHDC3-202ENST00000420401 COX11Q9Y6N1 276 aa12.17□□□□□ -0.46
ECHDC3-202ENST00000420401 CAMPP49913 170 aa12.16□□□□□ -0.46
ECHDC3-202ENST00000420401 Q0VG73 95 aa12.16□□□□□ -0.46
ECHDC3-202ENST00000420401 MPV17L2Q567V2 206 aa12.16□□□□□ -0.46
ECHDC3-202ENST00000420401 ATRAIDQ6UW56 229 aa12.16□□□□□ -0.46
ECHDC3-202ENST00000420401 UBE2WQ96B02 151 aa12.16□□□□□ -0.46
ECHDC3-202ENST00000420401 ANAPC16Q96DE5 110 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms