RNA–Protein interactions for RNA: ENST00000417508.1

VPS16-204, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-204ENST00000417508 HAMPP81172 84 aa12.12□□□□□ -0.47
VPS16-204ENST00000417508 VAX2Q9UIW0 290 aa12.12□□□□□ -0.47
VPS16-204ENST00000417508 C14orf177Q52M58 125 aa12.11□□□□□ -0.47
VPS16-204ENST00000417508 AP1S3Q96PC3 154 aa12.11□□□□□ -0.47
VPS16-204ENST00000417508 KIF25-AS1Q9Y6Z4 181 aa12.11□□□□□ -0.47
VPS16-204ENST00000417508 MUC21A0A0G2JKD1 596 aa12.1□□□□□ -0.47
VPS16-204ENST00000417508 MUC21A0A140T8X8 626 aa12.1□□□□□ -0.47
VPS16-204ENST00000417508 SULT1A2P50226 295 aa12.1□□□□□ -0.47
VPS16-204ENST00000417508 DNAJC30Q96LL9 226 aa12.1□□□□□ -0.47
VPS16-204ENST00000417508 DERL1Q9BUN8 251 aa12.1□□□□□ -0.47
VPS16-204ENST00000417508 C1orf43Q9BWL3 253 aa12.1□□□□□ -0.47
VPS16-204ENST00000417508 BIN3Q9NQY0 253 aa12.1□□□□□ -0.47
VPS16-204ENST00000417508 FAT1Q14517 4588 aa12.1□□□□□ -0.47
VPS16-204ENST00000417508 VPS13BQ7Z7G8 4022 aa12.09□□□□□ -0.47
VPS16-204ENST00000417508 XKRY2A2RUG3 117 aa12.09□□□□□ -0.47
VPS16-204ENST00000417508 PDE6DO43924 150 aa12.09□□□□□ -0.47
VPS16-204ENST00000417508 CRPP02741 224 aa12.09□□□□□ -0.47
VPS16-204ENST00000417508 CENPWQ5EE01 88 aa12.09□□□□□ -0.47
VPS16-204ENST00000417508 CHCHD5Q9BSY4 110 aa12.09□□□□□ -0.47
VPS16-204ENST00000417508 F2Z2F3 143 aa12.08□□□□□ -0.48
VPS16-204ENST00000417508 H7C1H1 209 aa12.08□□□□□ -0.48
VPS16-204ENST00000417508 IFNA1P01562 189 aa12.08□□□□□ -0.48
VPS16-204ENST00000417508 IGLV2-8P01709 118 aa12.08□□□□□ -0.48
VPS16-204ENST00000417508 PLA2G1BP04054 148 aaKnown RBP12.08□□□□□ -0.48
VPS16-204ENST00000417508 IGLC6P0CF74 106 aa12.08□□□□□ -0.48
VPS16-204ENST00000417508 SSTP61278 116 aa12.08□□□□□ -0.48
VPS16-204ENST00000417508 CACNG7P62955 275 aa12.08□□□□□ -0.48
VPS16-204ENST00000417508 MEF2BQ02080 365 aaPredicted RBP12.08□□□□□ -0.48
VPS16-204ENST00000417508 ENHOQ6UWT2 76 aa12.08□□□□□ -0.48
VPS16-204ENST00000417508 C15orf54Q8N8G6 183 aa12.08□□□□□ -0.48
VPS16-204ENST00000417508 FER1L6-AS1Q8NA97 138 aa12.08□□□□□ -0.48
VPS16-204ENST00000417508 OR2D3Q8NGH3 330 aa12.08□□□□□ -0.48
VPS16-204ENST00000417508 C19orf71A6NCJ1 209 aa12.07□□□□□ -0.48
VPS16-204ENST00000417508 ANGP03950 147 aaKnown RBP12.07□□□□□ -0.48
VPS16-204ENST00000417508 GNG4P50150 75 aa12.07□□□□□ -0.48
VPS16-204ENST00000417508 MIAQ16674 131 aa12.07□□□□□ -0.48
VPS16-204ENST00000417508 MPV17L2Q567V2 206 aa12.07□□□□□ -0.48
VPS16-204ENST00000417508 TAGLN2P37802 199 aaKnown RBP12.06□□□□□ -0.48
VPS16-204ENST00000417508 NTM-AS1Q6ZSK4 140 aa12.06□□□□□ -0.48
VPS16-204ENST00000417508 TCTE3Q8IZS6 198 aa12.06□□□□□ -0.48
VPS16-204ENST00000417508 TRBV25-1A0A075B6N4 114 aa12.05□□□□□ -0.48
VPS16-204ENST00000417508 RAB19A4D1S5 217 aa12.05□□□□□ -0.48
VPS16-204ENST00000417508 M0QY20 66 aa12.05□□□□□ -0.48
VPS16-204ENST00000417508 P01737 135 aa12.05□□□□□ -0.48
VPS16-204ENST00000417508 SLC51BQ86UW2 128 aa12.05□□□□□ -0.48
VPS16-204ENST00000417508 TPPP3Q9BW30 176 aa12.05□□□□□ -0.48
VPS16-204ENST00000417508 MED9Q9NWA0 146 aa12.05□□□□□ -0.48
VPS16-204ENST00000417508 GZMBP10144 247 aa12.04□□□□□ -0.48
VPS16-204ENST00000417508 IQCJQ1A5X6 159 aa12.04□□□□□ -0.48
VPS16-204ENST00000417508 WDR73Q6P4I2 378 aa12.04□□□□□ -0.48
VPS16-204ENST00000417508 PRR34Q9NV39 138 aa12.04□□□□□ -0.48
VPS16-204ENST00000417508 TRGC1P0CF51 173 aa12.03□□□□□ -0.48
VPS16-204ENST00000417508 BCL2P10415 239 aa12.03□□□□□ -0.48
VPS16-204ENST00000417508 LINC00528Q8N1L1 170 aa12.03□□□□□ -0.48
VPS16-204ENST00000417508 CHAC1Q9BUX1 264 aa12.03□□□□□ -0.48
VPS16-204ENST00000417508 IGHV1-24A0A0C4DH33 117 aa12.02□□□□□ -0.49
VPS16-204ENST00000417508 MGPP08493 103 aa12.02□□□□□ -0.49
VPS16-204ENST00000417508 RBX1P62877 108 aa12.02□□□□□ -0.49
VPS16-204ENST00000417508 LINC01620Q4KN68 170 aa12.02□□□□□ -0.49
VPS16-204ENST00000417508 C9orf62Q8N4C0 152 aa12.02□□□□□ -0.49
VPS16-204ENST00000417508 SUMO4Q6EEV6 95 aa12.01□□□□□ -0.49
VPS16-204ENST00000417508 DGAT2L7PQ6IED9 249 aa12.01□□□□□ -0.49
VPS16-204ENST00000417508 RASL11AQ6T310 242 aa12.01□□□□□ -0.49
VPS16-204ENST00000417508 LYZL1Q6UWQ5 148 aa12.01□□□□□ -0.49
VPS16-204ENST00000417508 DNAH8Q96JB1 4490 aa12□□□□□ -0.49
VPS16-204ENST00000417508 TRBV20OR9-2A0A075B6H5 130 aa12□□□□□ -0.49
VPS16-204ENST00000417508 NTF3P20783 257 aa12□□□□□ -0.49
VPS16-204ENST00000417508 GAGE6Q13070 117 aa12□□□□□ -0.49
VPS16-204ENST00000417508 SCXQ7RTU7 201 aa12□□□□□ -0.49
VPS16-204ENST00000417508 DPH3P1Q9H4G8 78 aa12□□□□□ -0.49
VPS16-204ENST00000417508 A0A1B0GUV1 79 aa11.99□□□□□ -0.49
VPS16-204ENST00000417508 USP17L23D6RBM5 183 aa11.99□□□□□ -0.49
VPS16-204ENST00000417508 LINC00269Q8N2A0 174 aa11.99□□□□□ -0.49
VPS16-204ENST00000417508 NUDT10Q8NFP7 164 aa11.99□□□□□ -0.49
VPS16-204ENST00000417508 DEFB104AQ8WTQ1 72 aa11.99□□□□□ -0.49
VPS16-204ENST00000417508 NUDT11Q96G61 164 aa11.99□□□□□ -0.49
VPS16-204ENST00000417508 NIT2Q9NQR4 276 aa11.99□□□□□ -0.49
VPS16-204ENST00000417508 PGLYRP4Q96LB8 373 aa11.98□□□□□ -0.49
VPS16-204ENST00000417508 TRAV8-4A0A0B4J246 113 aa11.97□□□□□ -0.49
VPS16-204ENST00000417508 HLA-DQA1P01909 254 aa11.97□□□□□ -0.49
VPS16-204ENST00000417508 NKX2-5P52952 324 aaPredicted RBP11.97□□□□□ -0.49
VPS16-204ENST00000417508 CLRN3Q8NCR9 226 aa11.97□□□□□ -0.49
VPS16-204ENST00000417508 CIRBP-AS1Q8TBR5 109 aa11.97□□□□□ -0.49
VPS16-204ENST00000417508 TMEM243Q9BU79 118 aa11.97□□□□□ -0.49
VPS16-204ENST00000417508 CNFNQ9BYD5 112 aa11.97□□□□□ -0.49
VPS16-204ENST00000417508 HERC1Q15751 4861 aa11.96□□□□□ -0.49
VPS16-204ENST00000417508 CTRLP40313 264 aa11.96□□□□□ -0.49
VPS16-204ENST00000417508 REG3AQ06141 175 aa11.96□□□□□ -0.49
VPS16-204ENST00000417508 KRTAP26-1Q6PEX3 210 aa11.96□□□□□ -0.49
VPS16-204ENST00000417508 J3QL48 77 aa11.95□□□□□ -0.5
VPS16-204ENST00000417508 PRSS1P07477 247 aa11.95□□□□□ -0.5
VPS16-204ENST00000417508 OCC1Q8TAD7 63 aa11.95□□□□□ -0.5
VPS16-204ENST00000417508 RPP21Q9H633 154 aaKnown RBP11.95□□□□□ -0.5
VPS16-204ENST00000417508 MYCBP2O75592 4640 aa11.94□□□□□ -0.5
VPS16-204ENST00000417508 BLOC1S1P78537 153 aa11.94□□□□□ -0.5
VPS16-204ENST00000417508 TWIST1Q15672 202 aa11.94□□□□□ -0.5
VPS16-204ENST00000417508 C9orf163Q8N9P6 203 aa11.94□□□□□ -0.5
VPS16-204ENST00000417508 KRTAP29-1A8MX34 341 aaPredicted RBP11.93□□□□□ -0.5
VPS16-204ENST00000417508 TMEM250H0YL14 139 aa11.93□□□□□ -0.5
VPS16-204ENST00000417508 COTL1Q14019 142 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms