RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 MRPS16Q9Y3D3 137 aaKnown RBP12.17□□□□□ -0.46
VCP-202ENST00000417448 KIF25-AS1Q9Y6Z4 181 aa12.17□□□□□ -0.46
VCP-202ENST00000417448 F5H697 171 aa12.16□□□□□ -0.46
VCP-202ENST00000417448 RHODO00212 210 aa12.16□□□□□ -0.46
VCP-202ENST00000417448 MGPP08493 103 aa12.16□□□□□ -0.46
VCP-202ENST00000417448 OSTCQ9NRP0 149 aa12.16□□□□□ -0.46
VCP-202ENST00000417448 A8MWL6 223 aa12.15□□□□□ -0.46
VCP-202ENST00000417448 F2Z2F3 143 aa12.15□□□□□ -0.46
VCP-202ENST00000417448 FAM229AH3BQW9 127 aa12.15□□□□□ -0.46
VCP-202ENST00000417448 DNAH10OSP0CZ25 163 aa12.15□□□□□ -0.46
VCP-202ENST00000417448 EVI2AP22794 236 aa12.15□□□□□ -0.46
VCP-202ENST00000417448 CTRLP40313 264 aa12.15□□□□□ -0.46
VCP-202ENST00000417448 FOXA3P55318 350 aaPredicted RBP12.15□□□□□ -0.46
VCP-202ENST00000417448 CACNG7P62955 275 aa12.15□□□□□ -0.46
VCP-202ENST00000417448 TWIST1Q15672 202 aa12.15□□□□□ -0.46
VCP-202ENST00000417448 V9GYV3 84 aa12.15□□□□□ -0.46
VCP-202ENST00000417448 LRP1Q07954 4544 aaKnown RBP12.14□□□□□ -0.47
VCP-202ENST00000417448 SMIM17P0DL12 118 aa12.14□□□□□ -0.47
VCP-202ENST00000417448 OR10G8Q8NGN5 311 aa12.14□□□□□ -0.47
VCP-202ENST00000417448 AP1S3Q96PC3 154 aa12.14□□□□□ -0.47
VCP-202ENST00000417448 WFDC10BQ8IUB3 73 aa12.13□□□□□ -0.47
VCP-202ENST00000417448 C15orf54Q8N8G6 183 aa12.13□□□□□ -0.47
VCP-202ENST00000417448 ATP6V0E2Q8NHE4 81 aa12.13□□□□□ -0.47
VCP-202ENST00000417448 TNFRSF18Q9Y5U5 241 aa12.13□□□□□ -0.47
VCP-202ENST00000417448 KRTAP29-1A8MX34 341 aaPredicted RBP12.12□□□□□ -0.47
VCP-202ENST00000417448 EREGO14944 169 aa12.12□□□□□ -0.47
VCP-202ENST00000417448 RAB4BP61018 213 aa12.12□□□□□ -0.47
VCP-202ENST00000417448 TSKUQ8WUA8 353 aa12.12□□□□□ -0.47
VCP-202ENST00000417448 LINC00694P0DN24 101 aa12.11□□□□□ -0.47
VCP-202ENST00000417448 CT83Q5H943 113 aa12.11□□□□□ -0.47
VCP-202ENST00000417448 A0A087WTM6 91 aa12.1□□□□□ -0.47
VCP-202ENST00000417448 HIGD1CA8MV81 97 aa12.1□□□□□ -0.47
VCP-202ENST00000417448 SUMO4Q6EEV6 95 aa12.1□□□□□ -0.47
VCP-202ENST00000417448 WDR73Q6P4I2 378 aa12.1□□□□□ -0.47
VCP-202ENST00000417448 COMMD7Q86VX2 200 aa12.1□□□□□ -0.47
VCP-202ENST00000417448 NEXN-AS1Q8NBZ9 246 aa12.1□□□□□ -0.47
VCP-202ENST00000417448 IGHV3-38A0A0C4DH36 116 aa12.09□□□□□ -0.47
VCP-202ENST00000417448 SIVA1O15304 175 aa12.09□□□□□ -0.47
VCP-202ENST00000417448 TRGC1P0CF51 173 aa12.09□□□□□ -0.47
VCP-202ENST00000417448 SERTAD4-AS1Q5TG53 156 aa12.09□□□□□ -0.47
VCP-202ENST00000417448 CNFNQ9BYD5 112 aa12.09□□□□□ -0.47
VCP-202ENST00000417448 DNAH8Q96JB1 4490 aa12.08□□□□□ -0.48
VCP-202ENST00000417448 TRAV26-2A0A0B4J265 109 aa12.08□□□□□ -0.48
VCP-202ENST00000417448 SH2D6Q7Z4S9 175 aa12.08□□□□□ -0.48
VCP-202ENST00000417448 NUP35Q8NFH5 326 aa12.08□□□□□ -0.48
VCP-202ENST00000417448 DEFB104AQ8WTQ1 72 aa12.08□□□□□ -0.48
VCP-202ENST00000417448 GTSF1LQ9H1H1 148 aa12.08□□□□□ -0.48
VCP-202ENST00000417448 DPH3P1Q9H4G8 78 aa12.08□□□□□ -0.48
VCP-202ENST00000417448 ADCYAP1P18509 176 aa12.07□□□□□ -0.48
VCP-202ENST00000417448 GCSHP23434 173 aa12.07□□□□□ -0.48
VCP-202ENST00000417448 OR10J3Q5JRS4 329 aa12.07□□□□□ -0.48
VCP-202ENST00000417448 Q8N3U1 123 aa12.07□□□□□ -0.48
VCP-202ENST00000417448 A0A1B0GUT8 65 aa12.06□□□□□ -0.48
VCP-202ENST00000417448 M0QY20 66 aa12.06□□□□□ -0.48
VCP-202ENST00000417448 UBE2D3P61077 147 aa12.06□□□□□ -0.48
VCP-202ENST00000417448 UBE2D2P62837 147 aa12.06□□□□□ -0.48
VCP-202ENST00000417448 RPL36AP83881 106 aaKnown RBP12.06□□□□□ -0.48
VCP-202ENST00000417448 RPL36ALQ969Q0 106 aaKnown RBP12.06□□□□□ -0.48
VCP-202ENST00000417448 GFRA4Q9GZZ7 299 aa12.06□□□□□ -0.48
VCP-202ENST00000417448 TRBV7-3A0A075B6L6 115 aa12.05□□□□□ -0.48
VCP-202ENST00000417448 TRBV10-1A0A0K0K1A3 114 aa12.05□□□□□ -0.48
VCP-202ENST00000417448 TMEM218A2RU14 115 aa12.05□□□□□ -0.48
VCP-202ENST00000417448 BORCS7Q96B45 105 aa12.05□□□□□ -0.48
VCP-202ENST00000417448 SMIM27A0A1W2PRY6 76 aa12.04□□□□□ -0.48
VCP-202ENST00000417448 F8W036 122 aa12.04□□□□□ -0.48
VCP-202ENST00000417448 GAS8-AS1O95177 125 aa12.04□□□□□ -0.48
VCP-202ENST00000417448 IGHV3-30P01768 117 aa12.04□□□□□ -0.48
VCP-202ENST00000417448 IGHV3-33P01772 117 aa12.04□□□□□ -0.48
VCP-202ENST00000417448 IGHV3-30-3P0DP02 117 aa12.04□□□□□ -0.48
VCP-202ENST00000417448 IGHV3-30-5P0DP03 117 aa12.04□□□□□ -0.48
VCP-202ENST00000417448 TIRAPP58753 221 aa12.04□□□□□ -0.48
VCP-202ENST00000417448 LELP1Q5T871 98 aa12.04□□□□□ -0.48
VCP-202ENST00000417448 GATD1Q8NB37 220 aa12.04□□□□□ -0.48
VCP-202ENST00000417448 LINC00862A6NCI5 91 aa12.03□□□□□ -0.48
VCP-202ENST00000417448 UQCC3Q6UW78 93 aa12.03□□□□□ -0.48
VCP-202ENST00000417448 RPL39LQ96EH5 51 aaKnown RBP12.03□□□□□ -0.48
VCP-202ENST00000417448 NAT8BQ9UHF3 227 aa12.03□□□□□ -0.48
VCP-202ENST00000417448 FAT3Q8TDW7 4589 aa12.03□□□□□ -0.48
VCP-202ENST00000417448 TRAV8-6A0A0B4J262 113 aa12.02□□□□□ -0.49
VCP-202ENST00000417448 FAM231BA6NCW3 169 aa12.02□□□□□ -0.49
VCP-202ENST00000417448 RASL11AQ6T310 242 aa12.02□□□□□ -0.49
VCP-202ENST00000417448 SMIM15Q7Z3B0 74 aa12.02□□□□□ -0.49
VCP-202ENST00000417448 CAMPP49913 170 aa12.01□□□□□ -0.49
VCP-202ENST00000417448 RIGQ13278 110 aa12.01□□□□□ -0.49
VCP-202ENST00000417448 MRPL54Q6P161 138 aaKnown RBP12.01□□□□□ -0.49
VCP-202ENST00000417448 TMEM70Q9BUB7 260 aa12.01□□□□□ -0.49
VCP-202ENST00000417448 PLA2G2DQ9UNK4 145 aa12.01□□□□□ -0.49
VCP-202ENST00000417448 SMKR1H3BMG3 65 aa12□□□□□ -0.49
VCP-202ENST00000417448 NTM-AS1Q6ZSK4 140 aa12□□□□□ -0.49
VCP-202ENST00000417448 AMN1Q8IY45 258 aa12□□□□□ -0.49
VCP-202ENST00000417448 RNF185Q96GF1 192 aa12□□□□□ -0.49
VCP-202ENST00000417448 FAM30AQ9NZY2 134 aa12□□□□□ -0.49
VCP-202ENST00000417448 NFE4Q86UQ8 179 aa11.99□□□□□ -0.49
VCP-202ENST00000417448 TMEM191AQ9H0A3 160 aa11.99□□□□□ -0.49
VCP-202ENST00000417448 NIT2Q9NQR4 276 aa11.99□□□□□ -0.49
VCP-202ENST00000417448 H7C1H1 209 aa11.98□□□□□ -0.49
VCP-202ENST00000417448 MT-ND4LP03901 98 aa11.98□□□□□ -0.49
VCP-202ENST00000417448 RAB4AP20338 218 aa11.98□□□□□ -0.49
VCP-202ENST00000417448 PNRC1Q12796 327 aaPredicted RBP11.98□□□□□ -0.49
VCP-202ENST00000417448 NCR2O95944 276 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms