RNA–Protein interactions for RNA: ENST00000416295.1

SEMA3B-201, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,088 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-201ENST00000416295 FOXA3P55318 350 aaPredicted RBP12.22□□□□□ -0.45
SEMA3B-201ENST00000416295 SMIM15Q7Z3B0 74 aa12.22□□□□□ -0.45
SEMA3B-201ENST00000416295 NFE4Q86UQ8 179 aa12.22□□□□□ -0.45
SEMA3B-201ENST00000416295 BORCS7Q96B45 105 aa12.22□□□□□ -0.45
SEMA3B-201ENST00000416295 A0A1B0GVY2 172 aa12.21□□□□□ -0.45
SEMA3B-201ENST00000416295 CLLU1Q5K131 121 aa12.21□□□□□ -0.45
SEMA3B-201ENST00000416295 PGLYRP4Q96LB8 373 aa12.21□□□□□ -0.45
SEMA3B-201ENST00000416295 HIGD1CA8MV81 97 aa12.2□□□□□ -0.46
SEMA3B-201ENST00000416295 M0QY20 66 aa12.2□□□□□ -0.46
SEMA3B-201ENST00000416295 TNP2Q05952 138 aa12.2□□□□□ -0.46
SEMA3B-201ENST00000416295 SUMO4Q6EEV6 95 aa12.2□□□□□ -0.46
SEMA3B-201ENST00000416295 DNAJC30Q96LL9 226 aa12.2□□□□□ -0.46
SEMA3B-201ENST00000416295 V9GYV3 84 aa12.2□□□□□ -0.46
SEMA3B-201ENST00000416295 DAZ4Q86SG3 579 aaKnown RBP12.19□□□□□ -0.46
SEMA3B-201ENST00000416295 DAZ3Q9NR90 486 aaKnown RBP12.19□□□□□ -0.46
SEMA3B-201ENST00000416295 TNFRSF18Q9Y5U5 241 aa12.19□□□□□ -0.46
SEMA3B-201ENST00000416295 A0A1B0GUT8 65 aa12.18□□□□□ -0.46
SEMA3B-201ENST00000416295 TMEM97Q5BJF2 176 aa12.18□□□□□ -0.46
SEMA3B-201ENST00000416295 RASL11AQ6T310 242 aa12.18□□□□□ -0.46
SEMA3B-201ENST00000416295 HERC2O95714 4834 aa12.18□□□□□ -0.46
SEMA3B-201ENST00000416295 IGHV3-30P01768 117 aa12.17□□□□□ -0.46
SEMA3B-201ENST00000416295 IGHV3-33P01772 117 aa12.17□□□□□ -0.46
SEMA3B-201ENST00000416295 IGHV3-30-3P0DP02 117 aa12.17□□□□□ -0.46
SEMA3B-201ENST00000416295 IGHV3-30-5P0DP03 117 aa12.17□□□□□ -0.46
SEMA3B-201ENST00000416295 Q6ZRN7 208 aaPredicted RBP12.17□□□□□ -0.46
SEMA3B-201ENST00000416295 URGCP-MRPS24S4R325 110 aa12.17□□□□□ -0.46
SEMA3B-201ENST00000416295 TRBV6-8A0A0A6YYG3 113 aa12.16□□□□□ -0.46
SEMA3B-201ENST00000416295 IBA57-AS1B1ANH7 110 aa12.16□□□□□ -0.46
SEMA3B-201ENST00000416295 IFITM2Q01629 132 aa12.16□□□□□ -0.46
SEMA3B-201ENST00000416295 NIT2Q9NQR4 276 aa12.16□□□□□ -0.46
SEMA3B-201ENST00000416295 DNAH2Q9P225 4427 aa12.16□□□□□ -0.46
SEMA3B-201ENST00000416295 LAGE3Q14657 143 aa12.15□□□□□ -0.46
SEMA3B-201ENST00000416295 KCNIP4Q6PIL6 250 aa12.15□□□□□ -0.46
SEMA3B-201ENST00000416295 NIT1Q86X76 327 aa12.15□□□□□ -0.46
SEMA3B-201ENST00000416295 FRZBQ92765 325 aa12.15□□□□□ -0.46
SEMA3B-201ENST00000416295 NAT8BQ9UHF3 227 aa12.15□□□□□ -0.46
SEMA3B-201ENST00000416295 FAT2Q9NYQ8 4349 aa12.15□□□□□ -0.46
SEMA3B-201ENST00000416295 CHCHD7Q9BUK0 85 aa12.14□□□□□ -0.47
SEMA3B-201ENST00000416295 A0A087WX48 190 aa12.13□□□□□ -0.47
SEMA3B-201ENST00000416295 PKIAP61925 76 aa12.13□□□□□ -0.47
SEMA3B-201ENST00000416295 RIGQ13278 110 aa12.13□□□□□ -0.47
SEMA3B-201ENST00000416295 NUP35Q8NFH5 326 aa12.13□□□□□ -0.47
SEMA3B-201ENST00000416295 PKHD1P08F94 4074 aa12.12□□□□□ -0.47
SEMA3B-201ENST00000416295 SMIM27A0A1W2PRY6 76 aa12.12□□□□□ -0.47
SEMA3B-201ENST00000416295 PNRC1Q12796 327 aaPredicted RBP12.12□□□□□ -0.47
SEMA3B-201ENST00000416295 Q8N3U1 123 aa12.12□□□□□ -0.47
SEMA3B-201ENST00000416295 GATD1Q8NB37 220 aa12.12□□□□□ -0.47
SEMA3B-201ENST00000416295 TMEM191AQ9H0A3 160 aa12.12□□□□□ -0.47
SEMA3B-201ENST00000416295 KIAA1109Q2LD37 5005 aa12.11□□□□□ -0.47
SEMA3B-201ENST00000416295 TRAV26-2A0A0B4J265 109 aa12.11□□□□□ -0.47
SEMA3B-201ENST00000416295 ELOBQ15370 118 aa12.11□□□□□ -0.47
SEMA3B-201ENST00000416295 CHCHD5Q9BSY4 110 aa12.11□□□□□ -0.47
SEMA3B-201ENST00000416295 Q9HAA7 133 aa12.11□□□□□ -0.47
SEMA3B-201ENST00000416295 DNAH17Q9UFH2 4485 aa12.11□□□□□ -0.47
SEMA3B-201ENST00000416295 TRBV25-1A0A075B6N4 114 aa12.1□□□□□ -0.47
SEMA3B-201ENST00000416295 TRAV8-3A0A0A6YYJ7 113 aa12.1□□□□□ -0.47
SEMA3B-201ENST00000416295 UQCC3Q6UW78 93 aa12.1□□□□□ -0.47
SEMA3B-201ENST00000416295 NTM-AS1Q6ZSK4 140 aa12.1□□□□□ -0.47
SEMA3B-201ENST00000416295 IGHV1-24A0A0C4DH33 117 aa12.09□□□□□ -0.47
SEMA3B-201ENST00000416295 TMEM262E9PQX1 116 aa12.09□□□□□ -0.47
SEMA3B-201ENST00000416295 EREGO14944 169 aa12.09□□□□□ -0.47
SEMA3B-201ENST00000416295 PPP1R2P9O14990 202 aa12.09□□□□□ -0.47
SEMA3B-201ENST00000416295 PSCAO43653 123 aa12.09□□□□□ -0.47
SEMA3B-201ENST00000416295 IQCJQ1A5X6 159 aa12.09□□□□□ -0.47
SEMA3B-201ENST00000416295 A0A1B0GW15 77 aa12.08□□□□□ -0.48
SEMA3B-201ENST00000416295 TM2D2Q9BX73 214 aa12.08□□□□□ -0.48
SEMA3B-201ENST00000416295 COTL1Q14019 142 aa12.07□□□□□ -0.48
SEMA3B-201ENST00000416295 RPL39LQ96EH5 51 aaKnown RBP12.07□□□□□ -0.48
SEMA3B-201ENST00000416295 MRAP2Q96G30 205 aa12.07□□□□□ -0.48
SEMA3B-201ENST00000416295 KRTAP17-1Q9BYP8 105 aa12.07□□□□□ -0.48
SEMA3B-201ENST00000416295 KLK12Q9UKR0 248 aa12.07□□□□□ -0.48
SEMA3B-201ENST00000416295 RAB4AP20338 218 aa12.06□□□□□ -0.48
SEMA3B-201ENST00000416295 AMN1Q8IY45 258 aa12.06□□□□□ -0.48
SEMA3B-201ENST00000416295 RMI2Q96E14 147 aa12.06□□□□□ -0.48
SEMA3B-201ENST00000416295 A0A087WTM6 91 aa12.05□□□□□ -0.48
SEMA3B-201ENST00000416295 MT-ND4LP03901 98 aa12.05□□□□□ -0.48
SEMA3B-201ENST00000416295 S100A8P05109 93 aa12.05□□□□□ -0.48
SEMA3B-201ENST00000416295 MPV17L2Q567V2 206 aa12.05□□□□□ -0.48
SEMA3B-201ENST00000416295 SPATA12Q7Z6I5 190 aa12.05□□□□□ -0.48
SEMA3B-201ENST00000416295 ANAPC16Q96DE5 110 aa12.05□□□□□ -0.48
SEMA3B-201ENST00000416295 RNF185Q96GF1 192 aa12.05□□□□□ -0.48
SEMA3B-201ENST00000416295 TMEM243Q9BU79 118 aa12.05□□□□□ -0.48
SEMA3B-201ENST00000416295 COX11Q9Y6N1 276 aa12.05□□□□□ -0.48
SEMA3B-201ENST00000416295 TRBV6-5A0A0K0K1A5 114 aa12.04□□□□□ -0.48
SEMA3B-201ENST00000416295 C16orf90A8MZG2 172 aa12.04□□□□□ -0.48
SEMA3B-201ENST00000416295 Q0VG73 95 aa12.04□□□□□ -0.48
SEMA3B-201ENST00000416295 GAGE6Q13070 117 aa12.04□□□□□ -0.48
SEMA3B-201ENST00000416295 UBE2WQ96B02 151 aa12.04□□□□□ -0.48
SEMA3B-201ENST00000416295 TMEM218A2RU14 115 aa12.03□□□□□ -0.48
SEMA3B-201ENST00000416295 SDHAF1A6NFY7 115 aa12.03□□□□□ -0.48
SEMA3B-201ENST00000416295 NCR2O95944 276 aa12.03□□□□□ -0.48
SEMA3B-201ENST00000416295 ANGP03950 147 aaKnown RBP12.03□□□□□ -0.48
SEMA3B-201ENST00000416295 AMTP48728 403 aa12.03□□□□□ -0.48
SEMA3B-201ENST00000416295 CAMPP49913 170 aa12.03□□□□□ -0.48
SEMA3B-201ENST00000416295 HBBP68871 147 aa12.03□□□□□ -0.48
SEMA3B-201ENST00000416295 ATRAIDQ6UW56 229 aa12.03□□□□□ -0.48
SEMA3B-201ENST00000416295 ST20Q9HBF5 79 aa12.03□□□□□ -0.48
SEMA3B-201ENST00000416295 PKD1P98161 4303 aa12.02□□□□□ -0.48
SEMA3B-201ENST00000416295 F8W036 122 aa12.02□□□□□ -0.49
SEMA3B-201ENST00000416295 PPP1R17O96001 155 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms