RNA–Protein interactions for RNA: ENST00000414672.5

RHBDD3-204, Transcript of rhomboid domain containing 3, humanhuman

TSL 5

Gene RHBDD3, Length 900 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-204ENST00000414672 ZC2HC1AQ96GY0 325 aa13.92□□□□□ -0.18
RHBDD3-204ENST00000414672 A0A1B0GV50 99 aa13.91□□□□□ -0.18
RHBDD3-204ENST00000414672 SH2D1AO60880 128 aa13.91□□□□□ -0.18
RHBDD3-204ENST00000414672 CRIP1P50238 77 aa13.91□□□□□ -0.18
RHBDD3-204ENST00000414672 TRBV6-8A0A0A6YYG3 113 aa13.9□□□□□ -0.18
RHBDD3-204ENST00000414672 FAM162BQ5T6X4 162 aa13.9□□□□□ -0.18
RHBDD3-204ENST00000414672 ZFP82Q8N141 532 aa13.9□□□□□ -0.18
RHBDD3-204ENST00000414672 MPV17L2Q567V2 206 aa13.89□□□□□ -0.19
RHBDD3-204ENST00000414672 LYPD6BQ8NI32 183 aa13.89□□□□□ -0.19
RHBDD3-204ENST00000414672 CHCHD5Q9BSY4 110 aa13.89□□□□□ -0.19
RHBDD3-204ENST00000414672 PRSS1P07477 247 aa13.88□□□□□ -0.19
RHBDD3-204ENST00000414672 DGAT2L7PQ6IED9 249 aa13.88□□□□□ -0.19
RHBDD3-204ENST00000414672 ZFP30Q9Y2G7 519 aa13.88□□□□□ -0.19
RHBDD3-204ENST00000414672 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.87□□□□□ -0.19
RHBDD3-204ENST00000414672 HIST1H2BAQ96A08 127 aa13.87□□□□□ -0.19
RHBDD3-204ENST00000414672 UBE2G1P62253 170 aa13.86□□□□□ -0.19
RHBDD3-204ENST00000414672 CCL20P78556 96 aa13.86□□□□□ -0.19
RHBDD3-204ENST00000414672 ZNF56Q15929 161 aa13.86□□□□□ -0.19
RHBDD3-204ENST00000414672 MIAQ16674 131 aa13.86□□□□□ -0.19
RHBDD3-204ENST00000414672 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.86□□□□□ -0.19
RHBDD3-204ENST00000414672 IFNA1P01562 189 aa13.85□□□□□ -0.19
RHBDD3-204ENST00000414672 C9orf163Q8N9P6 203 aa13.85□□□□□ -0.19
RHBDD3-204ENST00000414672 OR10G8Q8NGN5 311 aa13.85□□□□□ -0.19
RHBDD3-204ENST00000414672 NKX6-2Q9C056 277 aaPredicted RBP13.85□□□□□ -0.19
RHBDD3-204ENST00000414672 GNG13Q9P2W3 67 aa13.85□□□□□ -0.19
RHBDD3-204ENST00000414672 FAM74A7A6NL05 159 aa13.84□□□□□ -0.19
RHBDD3-204ENST00000414672 RAB4BP61018 213 aa13.84□□□□□ -0.19
RHBDD3-204ENST00000414672 PKIAP61925 76 aa13.84□□□□□ -0.19
RHBDD3-204ENST00000414672 LINC01559Q495D7 138 aa13.84□□□□□ -0.19
RHBDD3-204ENST00000414672 FMC1Q96HJ9 113 aa13.84□□□□□ -0.19
RHBDD3-204ENST00000414672 MANBALQ9NQG1 85 aa13.84□□□□□ -0.19
RHBDD3-204ENST00000414672 CLPSL2Q6UWE3 100 aa13.83□□□□□ -0.2
RHBDD3-204ENST00000414672 COX8CQ7Z4L0 72 aa13.83□□□□□ -0.2
RHBDD3-204ENST00000414672 NEXN-AS1Q8NBZ9 246 aa13.83□□□□□ -0.2
RHBDD3-204ENST00000414672 DPH3Q96FX2 82 aa13.83□□□□□ -0.2
RHBDD3-204ENST00000414672 PKHD1L1Q86WI1 4243 aa13.82□□□□□ -0.2
RHBDD3-204ENST00000414672 PANO1I0J062 215 aa13.82□□□□□ -0.2
RHBDD3-204ENST00000414672 MT1HL1P0DM35 61 aa13.82□□□□□ -0.2
RHBDD3-204ENST00000414672 ZNF674Q2M3X9 581 aa13.82□□□□□ -0.2
RHBDD3-204ENST00000414672 LINC00862A6NCI5 91 aa13.81□□□□□ -0.2
RHBDD3-204ENST00000414672 TAGLN2P37802 199 aaKnown RBP13.81□□□□□ -0.2
RHBDD3-204ENST00000414672 RPL19P84098 196 aaKnown RBP13.81□□□□□ -0.2
RHBDD3-204ENST00000414672 SDIM1Q6ZPB5 146 aa13.81□□□□□ -0.2
RHBDD3-204ENST00000414672 Q6ZRU5 148 aa13.81□□□□□ -0.2
RHBDD3-204ENST00000414672 MED9Q9NWA0 146 aa13.81□□□□□ -0.2
RHBDD3-204ENST00000414672 F5H697 171 aa13.8□□□□□ -0.2
RHBDD3-204ENST00000414672 PAGE4O60829 102 aa13.8□□□□□ -0.2
RHBDD3-204ENST00000414672 BCL2P10415 239 aa13.8□□□□□ -0.2
RHBDD3-204ENST00000414672 LINC00269Q8N2A0 174 aa13.8□□□□□ -0.2
RHBDD3-204ENST00000414672 FAM210AQ96ND0 272 aa13.8□□□□□ -0.2
RHBDD3-204ENST00000414672 GAGE6Q13070 117 aa13.79□□□□□ -0.2
RHBDD3-204ENST00000414672 CST9LP1Q5W188 147 aa13.79□□□□□ -0.2
RHBDD3-204ENST00000414672 COMMD7Q86VX2 200 aa13.79□□□□□ -0.2
RHBDD3-204ENST00000414672 EIF5A2Q9GZV4 153 aaKnown RBP13.79□□□□□ -0.2
RHBDD3-204ENST00000414672 RAB19A4D1S5 217 aa13.78□□□□□ -0.2
RHBDD3-204ENST00000414672 RBX1P62877 108 aa13.78□□□□□ -0.2
RHBDD3-204ENST00000414672 NDUFA5Q16718 116 aa13.78□□□□□ -0.2
RHBDD3-204ENST00000414672 TMEM97Q5BJF2 176 aa13.78□□□□□ -0.2
RHBDD3-204ENST00000414672 PRR27Q6MZM9 219 aa13.78□□□□□ -0.2
RHBDD3-204ENST00000414672 CLRN3Q8NCR9 226 aa13.78□□□□□ -0.2
RHBDD3-204ENST00000414672 OR10AG1Q8NH19 301 aa13.78□□□□□ -0.2
RHBDD3-204ENST00000414672 VAX2Q9UIW0 290 aa13.78□□□□□ -0.2
RHBDD3-204ENST00000414672 LTAP01374 205 aa13.77□□□□□ -0.21
RHBDD3-204ENST00000414672 SSTP61278 116 aa13.77□□□□□ -0.21
RHBDD3-204ENST00000414672 DERL1Q9BUN8 251 aa13.77□□□□□ -0.21
RHBDD3-204ENST00000414672 PRR34Q9NV39 138 aa13.77□□□□□ -0.21
RHBDD3-204ENST00000414672 MUC21A0A0G2JKD1 596 aa13.76□□□□□ -0.21
RHBDD3-204ENST00000414672 MUC21A0A140T8X8 626 aa13.76□□□□□ -0.21
RHBDD3-204ENST00000414672 hDV102S1A0JD36 115 aa13.76□□□□□ -0.21
RHBDD3-204ENST00000414672 MEF2BQ02080 365 aaPredicted RBP13.76□□□□□ -0.21
RHBDD3-204ENST00000414672 PEA15Q15121 130 aa13.76□□□□□ -0.21
RHBDD3-204ENST00000414672 NTM-AS1Q6ZSK4 140 aa13.76□□□□□ -0.21
RHBDD3-204ENST00000414672 IGLV10-54A0A075B6I4 117 aa13.75□□□□□ -0.21
RHBDD3-204ENST00000414672 TRBV6-1A0A0K0K1D8 114 aa13.75□□□□□ -0.21
RHBDD3-204ENST00000414672 AKR1C3P42330 323 aa13.75□□□□□ -0.21
RHBDD3-204ENST00000414672 SPANXN1Q5VSR9 72 aa13.75□□□□□ -0.21
RHBDD3-204ENST00000414672 KRTAP26-1Q6PEX3 210 aa13.75□□□□□ -0.21
RHBDD3-204ENST00000414672 DPH3P1Q9H4G8 78 aa13.75□□□□□ -0.21
RHBDD3-204ENST00000414672 TRBV25-1A0A075B6N4 114 aa13.74□□□□□ -0.21
RHBDD3-204ENST00000414672 SMIM17P0DL12 118 aa13.73□□□□□ -0.21
RHBDD3-204ENST00000414672 UQCC3Q6UW78 93 aa13.73□□□□□ -0.21
RHBDD3-204ENST00000414672 TCEAL7Q9BRU2 100 aa13.73□□□□□ -0.21
RHBDD3-204ENST00000414672 SMDT1Q9H4I9 107 aa13.73□□□□□ -0.21
RHBDD3-204ENST00000414672 IGHV3-64A0A075B6Q5 118 aa13.72□□□□□ -0.21
RHBDD3-204ENST00000414672 PDE6DO43924 150 aa13.72□□□□□ -0.21
RHBDD3-204ENST00000414672 SRSF3P84103 164 aaKnown RBP13.72□□□□□ -0.21
RHBDD3-204ENST00000414672 REG3AQ06141 175 aa13.72□□□□□ -0.21
RHBDD3-204ENST00000414672 AP5S1Q9NUS5 200 aa13.72□□□□□ -0.21
RHBDD3-204ENST00000414672 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.71□□□□□ -0.21
RHBDD3-204ENST00000414672 NDUFS6O75380 124 aaKnown RBP13.71□□□□□ -0.21
RHBDD3-204ENST00000414672 CNBPP62633 177 aaKnown RBP13.71□□□□□ -0.21
RHBDD3-204ENST00000414672 CIRBPQ14011 172 aaKnown RBP13.71□□□□□ -0.21
RHBDD3-204ENST00000414672 A0A087WYN8 130 aa13.7□□□□□ -0.22
RHBDD3-204ENST00000414672 IGHV1-24A0A0C4DH33 117 aa13.7□□□□□ -0.22
RHBDD3-204ENST00000414672 SLC7A5P1Q8MH63 180 aa13.7□□□□□ -0.22
RHBDD3-204ENST00000414672 CHTF8P0CG12 524 aa13.69□□□□□ -0.22
RHBDD3-204ENST00000414672 RNF185Q96GF1 192 aa13.69□□□□□ -0.22
RHBDD3-204ENST00000414672 TMEM250H0YL14 139 aa13.68□□□□□ -0.22
RHBDD3-204ENST00000414672 SNAI2O43623 268 aa13.68□□□□□ -0.22
RHBDD3-204ENST00000414672 SRP19P09132 144 aaKnown RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 154.5 ms