RNA–Protein interactions for RNA: ENST00000414620.1

ACTB-202, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 561 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-202ENST00000414620 TPPP3Q9BW30 176 aa10.19□□□□□ -0.78
ACTB-202ENST00000414620 C1orf43Q9BWL3 253 aa10.19□□□□□ -0.78
ACTB-202ENST00000414620 MANBALQ9NQG1 85 aa10.19□□□□□ -0.78
ACTB-202ENST00000414620 ANGP03950 147 aaKnown RBP10.18□□□□□ -0.78
ACTB-202ENST00000414620 MGPP08493 103 aa10.18□□□□□ -0.78
ACTB-202ENST00000414620 SMIM17P0DL12 118 aa10.18□□□□□ -0.78
ACTB-202ENST00000414620 Q0VG73 95 aa10.18□□□□□ -0.78
ACTB-202ENST00000414620 ENHOQ6UWT2 76 aa10.18□□□□□ -0.78
ACTB-202ENST00000414620 C11orf52Q96A22 123 aa10.18□□□□□ -0.78
ACTB-202ENST00000414620 AP1S3Q96PC3 154 aa10.18□□□□□ -0.78
ACTB-202ENST00000414620 ATRAIDQ6UW56 229 aa10.17□□□□□ -0.78
ACTB-202ENST00000414620 CLPSL2Q6UWE3 100 aa10.17□□□□□ -0.78
ACTB-202ENST00000414620 SCXQ7RTU7 201 aa10.17□□□□□ -0.78
ACTB-202ENST00000414620 KIF25-AS1Q9Y6Z4 181 aa10.17□□□□□ -0.78
ACTB-202ENST00000414620 RAB19A4D1S5 217 aa10.16□□□□□ -0.78
ACTB-202ENST00000414620 IGLV2-8P01709 118 aa10.16□□□□□ -0.78
ACTB-202ENST00000414620 HLA-DQA1P01909 254 aa10.16□□□□□ -0.78
ACTB-202ENST00000414620 NTM-AS1Q6ZSK4 140 aa10.16□□□□□ -0.78
ACTB-202ENST00000414620 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.16□□□□□ -0.78
ACTB-202ENST00000414620 OR2D3Q8NGH3 330 aa10.16□□□□□ -0.78
ACTB-202ENST00000414620 PLA2G1BP04054 148 aaKnown RBP10.15□□□□□ -0.78
ACTB-202ENST00000414620 GAGE6Q13070 117 aa10.15□□□□□ -0.78
ACTB-202ENST00000414620 FER1L6-AS1Q8NA97 138 aa10.15□□□□□ -0.78
ACTB-202ENST00000414620 DAZAP1Q96EP5 407 aaKnown RBP10.15□□□□□ -0.78
ACTB-202ENST00000414620 IGLC6P0CF74 106 aa10.14□□□□□ -0.79
ACTB-202ENST00000414620 HERC1Q15751 4861 aa10.14□□□□□ -0.79
ACTB-202ENST00000414620 TRAV1-1A0A0B4J248 108 aa10.13□□□□□ -0.79
ACTB-202ENST00000414620 C19orf71A6NCJ1 209 aa10.13□□□□□ -0.79
ACTB-202ENST00000414620 GNG4P50150 75 aa10.13□□□□□ -0.79
ACTB-202ENST00000414620 SULT1A2P50226 295 aa10.13□□□□□ -0.79
ACTB-202ENST00000414620 RAB5CP51148 216 aa10.13□□□□□ -0.79
ACTB-202ENST00000414620 SUMO4Q6EEV6 95 aa10.13□□□□□ -0.79
ACTB-202ENST00000414620 VAX2Q9UIW0 290 aa10.13□□□□□ -0.79
ACTB-202ENST00000414620 DMBT1Q9UGM3 2413 aaPredicted RBP10.12□□□□□ -0.79
ACTB-202ENST00000414620 MYCBP2O75592 4640 aa10.12□□□□□ -0.79
ACTB-202ENST00000414620 TRBV25-1A0A075B6N4 114 aa10.12□□□□□ -0.79
ACTB-202ENST00000414620 USP17L23D6RBM5 183 aa10.12□□□□□ -0.79
ACTB-202ENST00000414620 TEX46H3BTG2 121 aa10.12□□□□□ -0.79
ACTB-202ENST00000414620 RPS20P60866 119 aaKnown RBP10.12□□□□□ -0.79
ACTB-202ENST00000414620 PKIAP61925 76 aa10.12□□□□□ -0.79
ACTB-202ENST00000414620 RBX1P62877 108 aa10.12□□□□□ -0.79
ACTB-202ENST00000414620 MEF2BQ02080 365 aaPredicted RBP10.12□□□□□ -0.79
ACTB-202ENST00000414620 C14orf177Q52M58 125 aa10.12□□□□□ -0.79
ACTB-202ENST00000414620 TMEM97Q5BJF2 176 aa10.12□□□□□ -0.79
ACTB-202ENST00000414620 EIF5AL1Q6IS14 154 aaKnown RBP10.12□□□□□ -0.79
ACTB-202ENST00000414620 MED9Q9NWA0 146 aa10.12□□□□□ -0.79
ACTB-202ENST00000414620 J3QL48 77 aa10.11□□□□□ -0.79
ACTB-202ENST00000414620 M0QY20 66 aa10.11□□□□□ -0.79
ACTB-202ENST00000414620 P01737 135 aa10.11□□□□□ -0.79
ACTB-202ENST00000414620 NKX2-5P52952 324 aaPredicted RBP10.11□□□□□ -0.79
ACTB-202ENST00000414620 CACNG7P62955 275 aa10.11□□□□□ -0.79
ACTB-202ENST00000414620 MIAQ16674 131 aa10.11□□□□□ -0.79
ACTB-202ENST00000414620 CIRBP-AS1Q8TBR5 109 aa10.11□□□□□ -0.79
ACTB-202ENST00000414620 DEFB104AQ8WTQ1 72 aa10.11□□□□□ -0.79
ACTB-202ENST00000414620 CHAC1Q9BUX1 264 aa10.11□□□□□ -0.79
ACTB-202ENST00000414620 TRBV20OR9-2A0A075B6H5 130 aa10.1□□□□□ -0.79
ACTB-202ENST00000414620 IGHV1-24A0A0C4DH33 117 aa10.1□□□□□ -0.79
ACTB-202ENST00000414620 IFNA1P01562 189 aa10.1□□□□□ -0.79
ACTB-202ENST00000414620 BCL2P10415 239 aa10.1□□□□□ -0.79
ACTB-202ENST00000414620 LINC00269Q8N2A0 174 aa10.1□□□□□ -0.79
ACTB-202ENST00000414620 H7C1H1 209 aa10.09□□□□□ -0.79
ACTB-202ENST00000414620 PDE6DO43924 150 aa10.09□□□□□ -0.79
ACTB-202ENST00000414620 IQCJQ1A5X6 159 aa10.09□□□□□ -0.79
ACTB-202ENST00000414620 LYZL1Q6UWQ5 148 aa10.09□□□□□ -0.79
ACTB-202ENST00000414620 SRRM2Q9UQ35 2752 aaKnown RBP10.09□□□□□ -0.79
ACTB-202ENST00000414620 IGLV10-54A0A075B6I4 117 aa10.08□□□□□ -0.8
ACTB-202ENST00000414620 XKRY2A2RUG3 117 aa10.08□□□□□ -0.8
ACTB-202ENST00000414620 PRSS1P07477 247 aa10.08□□□□□ -0.8
ACTB-202ENST00000414620 SMIM12Q96EX1 92 aa10.08□□□□□ -0.8
ACTB-202ENST00000414620 PRR34Q9NV39 138 aa10.08□□□□□ -0.8
ACTB-202ENST00000414620 TRGC1P0CF51 173 aa10.07□□□□□ -0.8
ACTB-202ENST00000414620 KRTAP26-1Q6PEX3 210 aa10.07□□□□□ -0.8
ACTB-202ENST00000414620 RASL11AQ6T310 242 aa10.07□□□□□ -0.8
ACTB-202ENST00000414620 TCTE3Q8IZS6 198 aa10.07□□□□□ -0.8
ACTB-202ENST00000414620 DPH3P1Q9H4G8 78 aa10.07□□□□□ -0.8
ACTB-202ENST00000414620 F2Z2F3 143 aa10.06□□□□□ -0.8
ACTB-202ENST00000414620 NTF3P20783 257 aa10.06□□□□□ -0.8
ACTB-202ENST00000414620 REG3AQ06141 175 aa10.06□□□□□ -0.8
ACTB-202ENST00000414620 SLC51BQ86UW2 128 aa10.06□□□□□ -0.8
ACTB-202ENST00000414620 C20orf203Q8NBC4 194 aa10.06□□□□□ -0.8
ACTB-202ENST00000414620 NUDT10Q8NFP7 164 aa10.06□□□□□ -0.8
ACTB-202ENST00000414620 NUDT11Q96G61 164 aa10.06□□□□□ -0.8
ACTB-202ENST00000414620 TMEM243Q9BU79 118 aa10.06□□□□□ -0.8
ACTB-202ENST00000414620 IGLV4-60A0A075B6I1 120 aa10.05□□□□□ -0.8
ACTB-202ENST00000414620 GFRA4Q9GZZ7 299 aa10.05□□□□□ -0.8
ACTB-202ENST00000414620 RNASE7Q9H1E1 156 aaKnown RBP10.05□□□□□ -0.8
ACTB-202ENST00000414620 BIN3Q9NQY0 253 aa10.05□□□□□ -0.8
ACTB-202ENST00000414620 CTRLP40313 264 aa10.04□□□□□ -0.8
ACTB-202ENST00000414620 KRTAP10-4P60372 401 aaPredicted RBP10.04□□□□□ -0.8
ACTB-202ENST00000414620 TWIST1Q15672 202 aa10.04□□□□□ -0.8
ACTB-202ENST00000414620 RPP21Q9H633 154 aaKnown RBP10.04□□□□□ -0.8
ACTB-202ENST00000414620 NIT2Q9NQR4 276 aa10.04□□□□□ -0.8
ACTB-202ENST00000414620 K7EN84 100 aa10.03□□□□□ -0.8
ACTB-202ENST00000414620 UBE2L6O14933 153 aa10.03□□□□□ -0.8
ACTB-202ENST00000414620 TRAV26-2A0A0B4J265 109 aa10.02□□□□□ -0.81
ACTB-202ENST00000414620 KRTAP29-1A8MX34 341 aaPredicted RBP10.02□□□□□ -0.81
ACTB-202ENST00000414620 AMTP48728 403 aa10.02□□□□□ -0.81
ACTB-202ENST00000414620 C9orf62Q8N4C0 152 aa10.02□□□□□ -0.81
ACTB-202ENST00000414620 C9orf163Q8N9P6 203 aa10.02□□□□□ -0.81
ACTB-202ENST00000414620 OCC1Q8TAD7 63 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms