RNA–Protein interactions for RNA: ENST00000414407.1

LINC00398-201, long intergenic non-protein coding RNA 398, humanhuman

TSL 2 BASIC

Gene LINC00398, Length 906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00398-201ENST00000414407 LELP1Q5T871 98 aa11.29□□□□□ -0.6
LINC00398-201ENST00000414407 DNAJC30Q96LL9 226 aa11.29□□□□□ -0.6
LINC00398-201ENST00000414407 TMEM191AQ9H0A3 160 aa11.29□□□□□ -0.6
LINC00398-201ENST00000414407 A0A087WWC5 75 aa11.28□□□□□ -0.6
LINC00398-201ENST00000414407 NBDYA0A0U1RRE5 68 aa11.28□□□□□ -0.6
LINC00398-201ENST00000414407 TTC32Q5I0X7 151 aa11.28□□□□□ -0.6
LINC00398-201ENST00000414407 RASL11AQ6T310 242 aa11.28□□□□□ -0.6
LINC00398-201ENST00000414407 DNAH6Q9C0G6 4158 aa11.27□□□□□ -0.6
LINC00398-201ENST00000414407 TRAV8-6A0A0B4J262 113 aa11.27□□□□□ -0.61
LINC00398-201ENST00000414407 K7EP13 123 aa11.27□□□□□ -0.61
LINC00398-201ENST00000414407 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.27□□□□□ -0.61
LINC00398-201ENST00000414407 TNFRSF18Q9Y5U5 241 aa11.27□□□□□ -0.61
LINC00398-201ENST00000414407 DAZ4Q86SG3 579 aaKnown RBP11.26□□□□□ -0.61
LINC00398-201ENST00000414407 NIT2Q9NQR4 276 aa11.26□□□□□ -0.61
LINC00398-201ENST00000414407 DAZ3Q9NR90 486 aaKnown RBP11.26□□□□□ -0.61
LINC00398-201ENST00000414407 CARHSP1Q9Y2V2 147 aaKnown RBP11.26□□□□□ -0.61
LINC00398-201ENST00000414407 M0R2N4 97 aa11.25□□□□□ -0.61
LINC00398-201ENST00000414407 S100A8P05109 93 aa11.25□□□□□ -0.61
LINC00398-201ENST00000414407 ATP5L2Q7Z4Y8 100 aa11.25□□□□□ -0.61
LINC00398-201ENST00000414407 GATD1Q8NB37 220 aa11.25□□□□□ -0.61
LINC00398-201ENST00000414407 CTDSP1Q9GZU7 261 aa11.25□□□□□ -0.61
LINC00398-201ENST00000414407 DNAH10OSP0CZ25 163 aa11.24□□□□□ -0.61
LINC00398-201ENST00000414407 BTF3P20290 206 aaKnown RBP11.24□□□□□ -0.61
LINC00398-201ENST00000414407 TMEM97Q5BJF2 176 aa11.24□□□□□ -0.61
LINC00398-201ENST00000414407 OR10J3Q5JRS4 329 aa11.24□□□□□ -0.61
LINC00398-201ENST00000414407 WFDC10BQ8IUB3 73 aa11.24□□□□□ -0.61
LINC00398-201ENST00000414407 IMMP2LQ96T52 175 aa11.24□□□□□ -0.61
LINC00398-201ENST00000414407 TRAV9-2A0A087WT02 112 aa11.23□□□□□ -0.61
LINC00398-201ENST00000414407 IGHV3-38A0A0C4DH36 116 aa11.23□□□□□ -0.61
LINC00398-201ENST00000414407 A0A1B0GXF2 115 aa11.23□□□□□ -0.61
LINC00398-201ENST00000414407 RAB4AP20338 218 aa11.23□□□□□ -0.61
LINC00398-201ENST00000414407 HBBP68871 147 aa11.23□□□□□ -0.61
LINC00398-201ENST00000414407 MRAP2Q96G30 205 aa11.23□□□□□ -0.61
LINC00398-201ENST00000414407 TRAV26-2A0A0B4J265 109 aa11.22□□□□□ -0.61
LINC00398-201ENST00000414407 LINC01556Q5JQF7 62 aa11.22□□□□□ -0.61
LINC00398-201ENST00000414407 RNF185Q96GF1 192 aa11.22□□□□□ -0.61
LINC00398-201ENST00000414407 TMEM242Q9NWH2 141 aa11.22□□□□□ -0.61
LINC00398-201ENST00000414407 TRBV6-8A0A0A6YYG3 113 aa11.21□□□□□ -0.61
LINC00398-201ENST00000414407 CAMPP49913 170 aa11.21□□□□□ -0.61
LINC00398-201ENST00000414407 FAM104BQ5XKR9 115 aa11.21□□□□□ -0.61
LINC00398-201ENST00000414407 MRPL54Q6P161 138 aaKnown RBP11.21□□□□□ -0.61
LINC00398-201ENST00000414407 AMN1Q8IY45 258 aa11.21□□□□□ -0.61
LINC00398-201ENST00000414407 C10orf126Q8N4M7 172 aa11.21□□□□□ -0.61
LINC00398-201ENST00000414407 TRBV6-5A0A0K0K1A5 114 aa11.2□□□□□ -0.62
LINC00398-201ENST00000414407 RHEBQ15382 184 aa11.2□□□□□ -0.62
LINC00398-201ENST00000414407 C1orf134Q5TEV5 83 aa11.2□□□□□ -0.62
LINC00398-201ENST00000414407 CLRN3Q8NCR9 226 aa11.2□□□□□ -0.62
LINC00398-201ENST00000414407 BTF3L4Q96K17 158 aa11.2□□□□□ -0.62
LINC00398-201ENST00000414407 KRTAP1-5Q9BYS1 174 aa11.2□□□□□ -0.62
LINC00398-201ENST00000414407 PPP1R17O96001 155 aa11.19□□□□□ -0.62
LINC00398-201ENST00000414407 NDUFA5Q16718 116 aa11.19□□□□□ -0.62
LINC00398-201ENST00000414407 KCNIP4Q6PIL6 250 aa11.19□□□□□ -0.62
LINC00398-201ENST00000414407 C6orf223Q8N319 242 aa11.19□□□□□ -0.62
LINC00398-201ENST00000414407 TRAV9-1A0A075B6T8 112 aa11.18□□□□□ -0.62
LINC00398-201ENST00000414407 C7orf77A4D0Y5 90 aa11.18□□□□□ -0.62
LINC00398-201ENST00000414407 RPL39LQ96EH5 51 aaKnown RBP11.18□□□□□ -0.62
LINC00398-201ENST00000414407 CHCHD7Q9BUK0 85 aa11.18□□□□□ -0.62
LINC00398-201ENST00000414407 PKIAP61925 76 aa11.17□□□□□ -0.62
LINC00398-201ENST00000414407 IQCJQ1A5X6 159 aa11.17□□□□□ -0.62
LINC00398-201ENST00000414407 NTM-AS1Q6ZSK4 140 aa11.17□□□□□ -0.62
LINC00398-201ENST00000414407 LINC00336Q6ZUF6 198 aa11.17□□□□□ -0.62
LINC00398-201ENST00000414407 TRBV25-1A0A075B6N4 114 aa11.16□□□□□ -0.62
LINC00398-201ENST00000414407 RTL8CO15255 209 aa11.16□□□□□ -0.62
LINC00398-201ENST00000414407 APOC3P02656 99 aa11.16□□□□□ -0.62
LINC00398-201ENST00000414407 MRPL51Q4U2R6 128 aaKnown RBP11.16□□□□□ -0.62
LINC00398-201ENST00000414407 NIT1Q86X76 327 aa11.16□□□□□ -0.62
LINC00398-201ENST00000414407 SVBPQ8N300 66 aa11.16□□□□□ -0.62
LINC00398-201ENST00000414407 ST20Q9HBF5 79 aa11.16□□□□□ -0.62
LINC00398-201ENST00000414407 IGHV1-24A0A0C4DH33 117 aa11.15□□□□□ -0.62
LINC00398-201ENST00000414407 SDHAF1A6NFY7 115 aa11.15□□□□□ -0.62
LINC00398-201ENST00000414407 GAS8-AS1O95177 125 aa11.15□□□□□ -0.62
LINC00398-201ENST00000414407 SNAPINO95295 136 aa11.15□□□□□ -0.62
LINC00398-201ENST00000414407 S100PP25815 95 aa11.15□□□□□ -0.62
LINC00398-201ENST00000414407 COTL1Q14019 142 aa11.15□□□□□ -0.62
LINC00398-201ENST00000414407 URGCP-MRPS24S4R325 110 aa11.15□□□□□ -0.62
LINC00398-201ENST00000414407 IBA57-AS1B1ANH7 110 aa11.14□□□□□ -0.63
LINC00398-201ENST00000414407 NCR2O95944 276 aa11.14□□□□□ -0.63
LINC00398-201ENST00000414407 IGHV3-30P01768 117 aa11.14□□□□□ -0.63
LINC00398-201ENST00000414407 IGHV3-33P01772 117 aa11.14□□□□□ -0.63
LINC00398-201ENST00000414407 PPBPP02775 128 aa11.14□□□□□ -0.63
LINC00398-201ENST00000414407 IGHV3-30-3P0DP02 117 aa11.14□□□□□ -0.63
LINC00398-201ENST00000414407 IGHV3-30-5P0DP03 117 aa11.14□□□□□ -0.63
LINC00398-201ENST00000414407 CKS2P33552 79 aa11.14□□□□□ -0.63
LINC00398-201ENST00000414407 RPS10P46783 165 aaKnown RBP11.14□□□□□ -0.63
LINC00398-201ENST00000414407 LAGE3Q14657 143 aa11.14□□□□□ -0.63
LINC00398-201ENST00000414407 NFE4Q86UQ8 179 aa11.14□□□□□ -0.63
LINC00398-201ENST00000414407 NRACQ8N912 160 aa11.14□□□□□ -0.63
LINC00398-201ENST00000414407 RPS10P5Q9NQ39 176 aa11.14□□□□□ -0.63
LINC00398-201ENST00000414407 TRBV24-1A0A075B6N3 115 aa11.13□□□□□ -0.63
LINC00398-201ENST00000414407 A0A087WX48 190 aa11.13□□□□□ -0.63
LINC00398-201ENST00000414407 I3L3M4 83 aa11.13□□□□□ -0.63
LINC00398-201ENST00000414407 POLR2KP53803 58 aaKnown RBP11.13□□□□□ -0.63
LINC00398-201ENST00000414407 CHCHD5Q9BSY4 110 aa11.13□□□□□ -0.63
LINC00398-201ENST00000414407 TMEM70Q9BUB7 260 aa11.13□□□□□ -0.63
LINC00398-201ENST00000414407 TRBV27A0A0K0K1C4 114 aa11.12□□□□□ -0.63
LINC00398-201ENST00000414407 SMKR1H3BMG3 65 aa11.12□□□□□ -0.63
LINC00398-201ENST00000414407 ELOBQ15370 118 aa11.12□□□□□ -0.63
LINC00398-201ENST00000414407 C20orf78Q9BR46 151 aa11.12□□□□□ -0.63
LINC00398-201ENST00000414407 DNAH2Q9P225 4427 aa11.12□□□□□ -0.63
LINC00398-201ENST00000414407 TMEM262E9PQX1 116 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms