RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 CBLN1P23435 193 aa1.42□□□□□ -2.18
HMGB3P31-201ENST00000413333 IQCJQ1A5X6 159 aa1.42□□□□□ -2.18
HMGB3P31-201ENST00000413333 LYPD5Q6UWN5 251 aa1.42□□□□□ -2.18
HMGB3P31-201ENST00000413333 C5orf38Q86SI9 138 aa1.42□□□□□ -2.18
HMGB3P31-201ENST00000413333 DPH3P1Q9H4G8 78 aa1.42□□□□□ -2.18
HMGB3P31-201ENST00000413333 LINC00312Q9Y6C7 94 aa1.42□□□□□ -2.18
HMGB3P31-201ENST00000413333 MED12Q93074 2177 aa1.42□□□□□ -2.18
HMGB3P31-201ENST00000413333 DOCK2Q92608 1830 aa1.42□□□□□ -2.18
HMGB3P31-201ENST00000413333 GAPVD1Q14C86 1478 aa1.42□□□□□ -2.18
HMGB3P31-201ENST00000413333 MAGI1Q96QZ7 1491 aaPredicted RBP1.42□□□□□ -2.18
HMGB3P31-201ENST00000413333 IFT140Q96RY7 1462 aa1.42□□□□□ -2.18
HMGB3P31-201ENST00000413333 FLG2Q5D862 2391 aaPredicted RBP1.42□□□□□ -2.18
HMGB3P31-201ENST00000413333 TANC1Q9C0D5 1861 aa1.41□□□□□ -2.18
HMGB3P31-201ENST00000413333 PLXNA1Q9UIW2 1896 aa1.41□□□□□ -2.18
HMGB3P31-201ENST00000413333 KDM6BO15054 1643 aa1.41□□□□□ -2.18
HMGB3P31-201ENST00000413333 ARAP2Q8WZ64 1704 aa1.41□□□□□ -2.18
HMGB3P31-201ENST00000413333 SBF2Q86WG5 1849 aa1.41□□□□□ -2.18
HMGB3P31-201ENST00000413333 UBE2L5PA0A1B0GUS4 154 aa1.41□□□□□ -2.18
HMGB3P31-201ENST00000413333 TMEM30CPA0ZSE6 113 aa1.41□□□□□ -2.18
HMGB3P31-201ENST00000413333 RBAKDNA6NC62 111 aa1.41□□□□□ -2.18
HMGB3P31-201ENST00000413333 IGKCP01834 107 aa1.41□□□□□ -2.18
HMGB3P31-201ENST00000413333 PRB4P10163 310 aaPredicted RBP1.41□□□□□ -2.18
HMGB3P31-201ENST00000413333 SPTBP11277 2137 aa1.41□□□□□ -2.18
HMGB3P31-201ENST00000413333 ATP5EP56381 51 aaPredicted RBP1.41□□□□□ -2.18
HMGB3P31-201ENST00000413333 UBE2G1P62253 170 aa1.41□□□□□ -2.18
HMGB3P31-201ENST00000413333 UBE2L3P68036 154 aaKnown RBP1.41□□□□□ -2.18
HMGB3P31-201ENST00000413333 C9orf116Q5BN46 136 aaPredicted RBP1.41□□□□□ -2.18
HMGB3P31-201ENST00000413333 CSAG1Q6PB30 78 aa1.41□□□□□ -2.18
HMGB3P31-201ENST00000413333 LINC00299Q6ZSB3 139 aa1.41□□□□□ -2.18
HMGB3P31-201ENST00000413333 NDUFA11Q86Y39 141 aa1.41□□□□□ -2.18
HMGB3P31-201ENST00000413333 DPY30Q9C005 99 aa1.41□□□□□ -2.18
HMGB3P31-201ENST00000413333 V9GYS6 101 aa1.41□□□□□ -2.18
HMGB3P31-201ENST00000413333 BAZ1AQ9NRL2 1556 aaPredicted RBP1.41□□□□□ -2.18
HMGB3P31-201ENST00000413333 DLEC1Q9Y238 1755 aa1.41□□□□□ -2.18
HMGB3P31-201ENST00000413333 CEP350Q5VT06 3117 aa1.41□□□□□ -2.18
HMGB3P31-201ENST00000413333 CHD8Q9HCK8 2581 aa1.41□□□□□ -2.18
HMGB3P31-201ENST00000413333 PARP14Q460N5 1801 aa1.4□□□□□ -2.18
HMGB3P31-201ENST00000413333 LAMC3Q9Y6N6 1575 aa1.4□□□□□ -2.19
HMGB3P31-201ENST00000413333 NUPR2A6NF83 97 aa1.4□□□□□ -2.19
HMGB3P31-201ENST00000413333 H3BQ15 152 aa1.4□□□□□ -2.19
HMGB3P31-201ENST00000413333 SSSCA1O60232 199 aa1.4□□□□□ -2.19
HMGB3P31-201ENST00000413333 IGHV3-30P01768 117 aa1.4□□□□□ -2.19
HMGB3P31-201ENST00000413333 MT-ATP8P03928 68 aa1.4□□□□□ -2.19
HMGB3P31-201ENST00000413333 IGHV3-30-5P0DP03 117 aa1.4□□□□□ -2.19
HMGB3P31-201ENST00000413333 IL7P13232 177 aa1.4□□□□□ -2.19
HMGB3P31-201ENST00000413333 UBA52P62987 128 aaKnown RBP1.4□□□□□ -2.19
HMGB3P31-201ENST00000413333 DCDP81605 110 aaKnown RBP1.4□□□□□ -2.19
HMGB3P31-201ENST00000413333 RBM3P98179 157 aaKnown RBP1.4□□□□□ -2.19
HMGB3P31-201ENST00000413333 KRTAP21-2Q3LI59 83 aa1.4□□□□□ -2.19
HMGB3P31-201ENST00000413333 S100A7L2Q5SY68 101 aa1.4□□□□□ -2.19
HMGB3P31-201ENST00000413333 UNQ5815/PRO19632Q6UWF5 114 aa1.4□□□□□ -2.19
HMGB3P31-201ENST00000413333 DMAC1Q96GE9 116 aa1.4□□□□□ -2.19
HMGB3P31-201ENST00000413333 LIMD2Q9BT23 127 aa1.4□□□□□ -2.19
HMGB3P31-201ENST00000413333 TET1Q8NFU7 2136 aa1.4□□□□□ -2.19
HMGB3P31-201ENST00000413333 ABCC5O15440 1437 aa1.4□□□□□ -2.19
HMGB3P31-201ENST00000413333 PIGBOS1A0A0B4J2F0 54 aa1.39□□□□□ -2.19
HMGB3P31-201ENST00000413333 TRBV10-1A0A0K0K1A3 114 aa1.39□□□□□ -2.19
HMGB3P31-201ENST00000413333 TRBV10-3A0A0K0K1G6 114 aa1.39□□□□□ -2.19
HMGB3P31-201ENST00000413333 IGLV3-1P01715 115 aa1.39□□□□□ -2.19
HMGB3P31-201ENST00000413333 SPATA45Q537H7 98 aa1.39□□□□□ -2.19
HMGB3P31-201ENST00000413333 COMMD6Q7Z4G1 85 aa1.39□□□□□ -2.19
HMGB3P31-201ENST00000413333 C10orf82Q8WW14 230 aa1.39□□□□□ -2.19
HMGB3P31-201ENST00000413333 FAIMQ9NVQ4 179 aa1.39□□□□□ -2.19
HMGB3P31-201ENST00000413333 NRXN2Q9P2S2 1712 aa1.38□□□□□ -2.19
HMGB3P31-201ENST00000413333 TFF1P04155 84 aa1.38□□□□□ -2.19
HMGB3P31-201ENST00000413333 CCKP06307 115 aa1.38□□□□□ -2.19
HMGB3P31-201ENST00000413333 LINC00032P0C843 101 aa1.38□□□□□ -2.19
HMGB3P31-201ENST00000413333 PDE6GP18545 87 aa1.38□□□□□ -2.19
HMGB3P31-201ENST00000413333 Q0VG73 95 aa1.38□□□□□ -2.19
HMGB3P31-201ENST00000413333 C4orf33Q8N1A6 199 aa1.38□□□□□ -2.19
HMGB3P31-201ENST00000413333 ATG5Q9H1Y0 275 aa1.38□□□□□ -2.19
HMGB3P31-201ENST00000413333 Q9H521 79 aa1.38□□□□□ -2.19
HMGB3P31-201ENST00000413333 MRPL35Q9NZE8 188 aaKnown RBP1.38□□□□□ -2.19
HMGB3P31-201ENST00000413333 SCP2D1Q9UJQ7 156 aa1.38□□□□□ -2.19
HMGB3P31-201ENST00000413333 SCAPERQ9BY12 1400 aa1.38□□□□□ -2.19
HMGB3P31-201ENST00000413333 DOCK11Q5JSL3 2073 aa1.38□□□□□ -2.19
HMGB3P31-201ENST00000413333 MARF1Q9Y4F3 1742 aaKnown RBP1.37□□□□□ -2.19
HMGB3P31-201ENST00000413333 CCDC18Q5T9S5 1454 aa1.37□□□□□ -2.19
HMGB3P31-201ENST00000413333 PXDNQ92626 1479 aa1.37□□□□□ -2.19
HMGB3P31-201ENST00000413333 ARHGAP35Q9NRY4 1499 aa1.37□□□□□ -2.19
HMGB3P31-201ENST00000413333 CDK12Q9NYV4 1490 aaPredicted RBP1.37□□□□□ -2.19
HMGB3P31-201ENST00000413333 PI4KAP42356 2102 aa1.37□□□□□ -2.19
HMGB3P31-201ENST00000413333 PPLO60437 1756 aa1.37□□□□□ -2.19
HMGB3P31-201ENST00000413333 RGPD4Q7Z3J3 1758 aa1.37□□□□□ -2.19
HMGB3P31-201ENST00000413333 USP9XQ93008 2570 aaPredicted RBP1.37□□□□□ -2.19
HMGB3P31-201ENST00000413333 ABCC3O15438 1527 aa1.37□□□□□ -2.19
HMGB3P31-201ENST00000413333 IGLC1P0CG04 106 aa1.37□□□□□ -2.19
HMGB3P31-201ENST00000413333 EFNA4P52798 201 aa1.37□□□□□ -2.19
HMGB3P31-201ENST00000413333 CCL8P80075 99 aa1.37□□□□□ -2.19
HMGB3P31-201ENST00000413333 RPL7L1Q6DKI1 246 aaKnown RBP1.37□□□□□ -2.19
HMGB3P31-201ENST00000413333 SPTSSBQ8NFR3 76 aa1.37□□□□□ -2.19
HMGB3P31-201ENST00000413333 IFI27L1Q96BM0 104 aa1.37□□□□□ -2.19
HMGB3P31-201ENST00000413333 VAMP8Q9BV40 100 aa1.37□□□□□ -2.19
HMGB3P31-201ENST00000413333 MRPL36Q9P0J6 103 aaKnown RBP1.37□□□□□ -2.19
HMGB3P31-201ENST00000413333 AP4S1Q9Y587 144 aa1.37□□□□□ -2.19
HMGB3P31-201ENST00000413333 PSME4Q14997 1843 aa1.37□□□□□ -2.19
HMGB3P31-201ENST00000413333 ARFGEF1Q9Y6D6 1849 aa1.37□□□□□ -2.19
HMGB3P31-201ENST00000413333 PRDM15P57071 1507 aaPredicted RBP1.36□□□□□ -2.19
HMGB3P31-201ENST00000413333 RREB1Q92766 1687 aa1.36□□□□□ -2.19
HMGB3P31-201ENST00000413333 AFDNP55196 1824 aaKnown RBP1.36□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 159.1 ms