RNA–Protein interactions for RNA: ENST00000412899.5

ITGA6-204, Transcript of integrin subunit alpha 6, humanhuman

TSL 1 (best)

Gene ITGA6, Length 970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-204ENST00000412899 J3QL48 77 aa12.42□□□□□ -0.42
ITGA6-204ENST00000412899 K7EN84 100 aa12.42□□□□□ -0.42
ITGA6-204ENST00000412899 IGLC6P0CF74 106 aa12.42□□□□□ -0.42
ITGA6-204ENST00000412899 TM2D2Q9BX73 214 aa12.42□□□□□ -0.42
ITGA6-204ENST00000412899 SMIM17P0DL12 118 aa12.41□□□□□ -0.42
ITGA6-204ENST00000412899 RAB4BP61018 213 aa12.41□□□□□ -0.42
ITGA6-204ENST00000412899 ZNF56Q15929 161 aa12.41□□□□□ -0.42
ITGA6-204ENST00000412899 RNASE7Q9H1E1 156 aaKnown RBP12.41□□□□□ -0.42
ITGA6-204ENST00000412899 FAT1Q14517 4588 aa12.41□□□□□ -0.42
ITGA6-204ENST00000412899 FLG2Q5D862 2391 aaPredicted RBP12.41□□□□□ -0.42
ITGA6-204ENST00000412899 F2Z2F3 143 aa12.4□□□□□ -0.42
ITGA6-204ENST00000412899 LINC00694P0DN24 101 aa12.4□□□□□ -0.42
ITGA6-204ENST00000412899 LAGE3Q14657 143 aa12.4□□□□□ -0.42
ITGA6-204ENST00000412899 RPP21Q9H633 154 aaKnown RBP12.4□□□□□ -0.42
ITGA6-204ENST00000412899 TRBV10-1A0A0K0K1A3 114 aa12.39□□□□□ -0.43
ITGA6-204ENST00000412899 F5H697 171 aa12.39□□□□□ -0.43
ITGA6-204ENST00000412899 NDUFS6O75380 124 aaKnown RBP12.39□□□□□ -0.43
ITGA6-204ENST00000412899 CACNG7P62955 275 aa12.39□□□□□ -0.43
ITGA6-204ENST00000412899 LYZL1Q6UWQ5 148 aa12.39□□□□□ -0.43
ITGA6-204ENST00000412899 AP1S3Q96PC3 154 aa12.39□□□□□ -0.43
ITGA6-204ENST00000412899 PLA2G1BP04054 148 aaKnown RBP12.38□□□□□ -0.43
ITGA6-204ENST00000412899 SRP19P09132 144 aaKnown RBP12.38□□□□□ -0.43
ITGA6-204ENST00000412899 RPL36AP83881 106 aaKnown RBP12.38□□□□□ -0.43
ITGA6-204ENST00000412899 RPL36ALQ969Q0 106 aaKnown RBP12.38□□□□□ -0.43
ITGA6-204ENST00000412899 SMIM7Q9BQ49 75 aa12.38□□□□□ -0.43
ITGA6-204ENST00000412899 TRBV7-3A0A075B6L6 115 aa12.36□□□□□ -0.43
ITGA6-204ENST00000412899 A0A087WWC5 75 aa12.36□□□□□ -0.43
ITGA6-204ENST00000412899 TRAV8-3A0A0A6YYJ7 113 aa12.36□□□□□ -0.43
ITGA6-204ENST00000412899 ZNF727A8MUV8 499 aa12.36□□□□□ -0.43
ITGA6-204ENST00000412899 WFDC2Q14508 124 aa12.36□□□□□ -0.43
ITGA6-204ENST00000412899 Q8N3U1 123 aa12.36□□□□□ -0.43
ITGA6-204ENST00000412899 KIF25-AS1Q9Y6Z4 181 aa12.36□□□□□ -0.43
ITGA6-204ENST00000412899 LECT2O14960 151 aa12.35□□□□□ -0.43
ITGA6-204ENST00000412899 GATCO43716 136 aaKnown RBP12.35□□□□□ -0.43
ITGA6-204ENST00000412899 NTF3P20783 257 aa12.35□□□□□ -0.43
ITGA6-204ENST00000412899 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.34□□□□□ -0.43
ITGA6-204ENST00000412899 MGPP08493 103 aa12.34□□□□□ -0.43
ITGA6-204ENST00000412899 UBE2D3P61077 147 aa12.34□□□□□ -0.43
ITGA6-204ENST00000412899 UBE2D2P62837 147 aa12.34□□□□□ -0.43
ITGA6-204ENST00000412899 WDR73Q6P4I2 378 aa12.34□□□□□ -0.43
ITGA6-204ENST00000412899 FAM231DQ6ZW35 169 aa12.34□□□□□ -0.43
ITGA6-204ENST00000412899 DAZ4Q86SG3 579 aaKnown RBP12.34□□□□□ -0.43
ITGA6-204ENST00000412899 OR10G8Q8NGN5 311 aa12.34□□□□□ -0.43
ITGA6-204ENST00000412899 DAZ3Q9NR90 486 aaKnown RBP12.34□□□□□ -0.43
ITGA6-204ENST00000412899 TRGC1P0CF51 173 aa12.33□□□□□ -0.44
ITGA6-204ENST00000412899 CTRLP40313 264 aa12.33□□□□□ -0.44
ITGA6-204ENST00000412899 PEA15Q15121 130 aa12.33□□□□□ -0.44
ITGA6-204ENST00000412899 TWIST1Q15672 202 aa12.33□□□□□ -0.44
ITGA6-204ENST00000412899 LINC01551Q86U37 167 aa12.33□□□□□ -0.44
ITGA6-204ENST00000412899 LINC00528Q8N1L1 170 aa12.33□□□□□ -0.44
ITGA6-204ENST00000412899 NEXN-AS1Q8NBZ9 246 aa12.33□□□□□ -0.44
ITGA6-204ENST00000412899 SRRM2Q9UQ35 2752 aaKnown RBP12.33□□□□□ -0.44
ITGA6-204ENST00000412899 A8MWL6 223 aa12.32□□□□□ -0.44
ITGA6-204ENST00000412899 Q6ZSA8 131 aa12.32□□□□□ -0.44
ITGA6-204ENST00000412899 MYCBP2O75592 4640 aa12.31□□□□□ -0.44
ITGA6-204ENST00000412899 C9JQL5 133 aa12.31□□□□□ -0.44
ITGA6-204ENST00000412899 TMEM241Q24JQ0 296 aa12.31□□□□□ -0.44
ITGA6-204ENST00000412899 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.31□□□□□ -0.44
ITGA6-204ENST00000412899 DEFB104AQ8WTQ1 72 aa12.31□□□□□ -0.44
ITGA6-204ENST00000412899 GTSF1Q8WW33 167 aa12.31□□□□□ -0.44
ITGA6-204ENST00000412899 BAALCQ8WXS3 180 aa12.31□□□□□ -0.44
ITGA6-204ENST00000412899 COX11Q9Y6N1 276 aa12.31□□□□□ -0.44
ITGA6-204ENST00000412899 SRSF3P84103 164 aaKnown RBP12.3□□□□□ -0.44
ITGA6-204ENST00000412899 FAM74A3Q4VXF1 159 aa12.3□□□□□ -0.44
ITGA6-204ENST00000412899 CNFNQ9BYD5 112 aa12.3□□□□□ -0.44
ITGA6-204ENST00000412899 DPH3P1Q9H4G8 78 aa12.3□□□□□ -0.44
ITGA6-204ENST00000412899 VPS13BQ7Z7G8 4022 aa12.29□□□□□ -0.44
ITGA6-204ENST00000412899 KRTAP29-1A8MX34 341 aaPredicted RBP12.29□□□□□ -0.44
ITGA6-204ENST00000412899 H7C1H1 209 aa12.29□□□□□ -0.44
ITGA6-204ENST00000412899 M0QY20 66 aa12.29□□□□□ -0.44
ITGA6-204ENST00000412899 CT83Q5H943 113 aa12.29□□□□□ -0.44
ITGA6-204ENST00000412899 SUMO4Q6EEV6 95 aa12.29□□□□□ -0.44
ITGA6-204ENST00000412899 RMI2Q96E14 147 aa12.29□□□□□ -0.44
ITGA6-204ENST00000412899 PGLYRP4Q96LB8 373 aa12.29□□□□□ -0.44
ITGA6-204ENST00000412899 SMDT1Q9H4I9 107 aa12.29□□□□□ -0.44
ITGA6-204ENST00000412899 URGCP-MRPS24S4R325 110 aa12.29□□□□□ -0.44
ITGA6-204ENST00000412899 LINC01620Q4KN68 170 aa12.28□□□□□ -0.44
ITGA6-204ENST00000412899 C15orf54Q8N8G6 183 aa12.28□□□□□ -0.44
ITGA6-204ENST00000412899 OSTCQ9NRP0 149 aa12.28□□□□□ -0.44
ITGA6-204ENST00000412899 SMIM15Q7Z3B0 74 aa12.27□□□□□ -0.45
ITGA6-204ENST00000412899 NIT1Q86X76 327 aa12.27□□□□□ -0.45
ITGA6-204ENST00000412899 Q8N976 141 aa12.27□□□□□ -0.45
ITGA6-204ENST00000412899 DNAJC30Q96LL9 226 aa12.27□□□□□ -0.45
ITGA6-204ENST00000412899 IGKV2D-24A0A075B6R9 120 aa12.26□□□□□ -0.45
ITGA6-204ENST00000412899 TRBV6-8A0A0A6YYG3 113 aa12.26□□□□□ -0.45
ITGA6-204ENST00000412899 FOXA3P55318 350 aaPredicted RBP12.26□□□□□ -0.45
ITGA6-204ENST00000412899 RAB14P61106 215 aa12.26□□□□□ -0.45
ITGA6-204ENST00000412899 KCNIP4Q6PIL6 250 aa12.26□□□□□ -0.45
ITGA6-204ENST00000412899 RASL11AQ6T310 242 aa12.26□□□□□ -0.45
ITGA6-204ENST00000412899 SCXQ7RTU7 201 aa12.26□□□□□ -0.45
ITGA6-204ENST00000412899 TSKUQ8WUA8 353 aa12.26□□□□□ -0.45
ITGA6-204ENST00000412899 BORCS7Q96B45 105 aa12.26□□□□□ -0.45
ITGA6-204ENST00000412899 NAT8Q9UHE5 227 aa12.26□□□□□ -0.45
ITGA6-204ENST00000412899 A0A087WX48 190 aa12.25□□□□□ -0.45
ITGA6-204ENST00000412899 TMEM262E9PQX1 116 aa12.25□□□□□ -0.45
ITGA6-204ENST00000412899 RPL23P62829 140 aaKnown RBP12.25□□□□□ -0.45
ITGA6-204ENST00000412899 ADIRFQ15847 76 aa12.25□□□□□ -0.45
ITGA6-204ENST00000412899 ISOC2Q96AB3 205 aa12.25□□□□□ -0.45
ITGA6-204ENST00000412899 KLK12Q9UKR0 248 aa12.25□□□□□ -0.45
ITGA6-204ENST00000412899 TMEM97Q5BJF2 176 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms